bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_1973_orf2
Length=156
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0172 155 5e-37
> 5833.PF11_0172
Length=455
Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 103/143 (72%), Gaps = 0/143 (0%)
Query 4 RKTLLATILVAVPIYLSPIILTTGFNRTLGISNKAFVLSGGFLIEATAEIQLLPLLVLTA 63
RKTL+ T LV+ PIY+SPIILT N+ LGISN+ FVLSGGFLIEA EIQLLPL +LTA
Sbjct 311 RKTLIITTLVSFPIYISPIILTEHINKFLGISNELFVLSGGFLIEAITEIQLLPLFILTA 370
Query 64 SICPPGLEGSVYAMMMSVRNSGAMVSRGISAILTYMAGITSSNFTHLTGYIMLCGASLLI 123
+IC PGLE SV+A ++SV+N G++ +G S+ +TY+ I S NF +L+ YI+ CG LL
Sbjct 371 NICQPGLEASVFATILSVKNLGSLTKKGTSSFITYLMKIDSYNFDNLSLYILTCGFFLLF 430
Query 124 PLIFLEYVPDDAEVQRVKQYHDS 146
L + +P++ ++++K S
Sbjct 431 SLTLVPLLPNEEHIEKLKNKETS 453
Lambda K H
0.324 0.138 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 24371502831
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40