bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2322_orf1 Length=142 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_1830 149 3e-35 > 5807.cgd7_1830 Length=654 Score = 149 bits (375), Expect = 3e-35, Method: Composition-based stats. Identities = 73/144 (50%), Positives = 95/144 (65%), Gaps = 2/144 (1%) Query 1 NFTMNSTAVPRRPGEAVGSICRLVSQE-KELTINVEYNLLDSLLKGAGQEGDKAG-PLGY 58 +F MNS +PR P EAVG++C+L + K++TIN EYN L LLK G D A GY Sbjct 316 SFVMNSLTIPRIPCEAVGALCKLRYPDGKKITINTEYNQLTPLLKSCGLGSDFADEKTGY 375 Query 59 SSLPGNTNAIVLQLSNYFKALNQSKGMVPEFINPKFKDATKTSFKSPARLESMMQDLPLQ 118 S PGN+N + + + Y K L ++ G+VPEF+NPK+ D+TKT+FKSP RLE MMQD+PL Sbjct 376 SPFPGNSNVLFISMDYYMKTLEKTGGVVPEFVNPKYLDSTKTAFKSPTRLECMMQDIPLL 435 Query 119 LNPTDKVGFVELPRWCCFSPVKNS 142 KVG V++ RW FS KNS Sbjct 436 FEADYKVGCVQMQRWATFSACKNS 459 Lambda K H 0.315 0.132 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22741008115 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40