bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2442_orf1 Length=97 Score E Sequences producing significant alignments: (Bits) Value 3702.AT5G22330.1 117 1e-25 > 3702.AT5G22330.1 Length=458 Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 54/70 (77%), Positives = 62/70 (88%), Gaps = 0/70 (0%) Query 8 LQDVTLHDLDAANAKPSGGAPLASLLGHFSKPRKTEITEKLRQEINKVVNKYLDQGVAEL 67 +QDVTL DLDAANA+P GG + SL+G KPRKTEIT+KLRQEINKVVN+Y+D+GVAEL Sbjct 238 VQDVTLQDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAEL 297 Query 68 VPGVLFIDEV 77 VPGVLFIDEV Sbjct 298 VPGVLFIDEV 307 Lambda K H 0.318 0.134 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22472223870 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40