bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_2455_orf1 Length=134 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd2_1910 148 6e-35 > 5807.cgd2_1910 Length=534 Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 75/133 (56%), Positives = 90/133 (67%), Gaps = 0/133 (0%) Query 2 GFGVYRHADGSEYKGQWKDDKKHGQAEESWADGSHFSGVYIQGKKEGYGVFIWSEGSRYA 61 G G Y H+DGS+Y G+WK+DKKHG+A ESW DGS+F G Y G K+G+G F W +GS+Y Sbjct 96 GHGTYTHSDGSKYVGEWKNDKKHGRAIESWVDGSNFEGSYAYGLKQGFGKFSWHDGSKYI 155 Query 62 GQFKQNEIEGEGEYLWIDGRSYKGQWRANRMHGRGVFTWPDGRQYRGEYKDDKKDGEGSF 121 G F N+I G G Y W DGR Y G W N M G G F W D R Y G+Y +DKKDG+G F Sbjct 156 GNFDANQINGFGIYHWNDGRVYTGYWLKNHMFGYGKFDWTDHRCYEGQYINDKKDGDGKF 215 Query 122 LWVDGRAFRGNWK 134 W DGRA+ G WK Sbjct 216 TWPDGRAYIGQWK 228 Lambda K H 0.316 0.139 0.471 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22682284714 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40