bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_2502_orf1
Length=121
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0395 85.1 5e-16
> 5833.PF11_0395
Length=4226
Score = 85.1 bits (209), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 10/124 (8%)
Query 1 PPRRFRVNEDFVAYGSEKKDKDAAPQDKDGGGSHGR---------GGGAGDDVSIDSNSS 51
P +RFR+NED + + + ++ ++ P+ D + + + S S++S
Sbjct 2681 PGKRFRINEDHIYFKNNERMENI-PEALDVNKKYYHIIQNKAEYYDNDSLSEFSYTSSNS 2739
Query 52 GVSFEGDKHRDHVKLVKVSHLINRFSLKFKDMQLEADYQIHQKKSFVKRLVPWYRVIFVF 111
++ + ++VKVSHLINRF+L FKDMQLE+ +QIH+K F K PWYR IF+
Sbjct 2740 SINNKKKNENTQKEIVKVSHLINRFTLAFKDMQLESGFQIHKKNKFYKTFTPWYRFIFLL 2799
Query 112 LGLY 115
LG++
Sbjct 2800 LGVF 2803
Lambda K H
0.321 0.141 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22998535989
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40