bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_2961_orf1
Length=122
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0108 157 6e-38
> 5833.PF11_0108
Length=1329
Score = 157 bits (398), Expect = 6e-38, Method: Composition-based stats.
Identities = 78/123 (63%), Positives = 97/123 (78%), Gaps = 1/123 (0%)
Query 1 ARELISLGCQRCPKSEDVWLEAARLE-KPRNAKAVLAKAVSVLPHSVRLWLDAYAREKDI 59
A+E+I GC C K+ED+WLEA RLE K K +LAKA+ +P SV+LWL+AY +EK++
Sbjct 443 AKEIIMKGCVVCSKNEDIWLEAVRLEEKLSEVKIILAKAIKHIPTSVKLWLEAYKKEKNV 502
Query 60 NDRRLVLRKALEFIPNSVRLWKEACSLEDERNARILLTRAVECVSQSHEMWLALARLSTY 119
+D+R VLRKA+E IPNSV+LWKEA SLE+E NA ILL RAVEC+ QS EMW+ALARL TY
Sbjct 503 DDKRKVLRKAIECIPNSVKLWKEAISLENENNAYILLKRAVECIPQSIEMWIALARLCTY 562
Query 120 EEA 122
EA
Sbjct 563 TEA 565
Lambda K H
0.320 0.131 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22916587881
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40