bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_3027_orf1 Length=118 Score E Sequences producing significant alignments: (Bits) Value 411154.GFO_0789 79.7 2e-14 > 411154.GFO_0789 Length=338 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 3/98 (3%) Query 5 RSQLANKEYTEFLGDMLGEQQWAWLQHELQSSTADVNVVVSSLQAF-ANHRLVTETWSHF 63 +S+ NK Y G +LGE+QW+WL+ EL +S D NV++SS+Q A H ETW +F Sbjct 173 KSEDPNKRYEPSTGTVLGEEQWSWLEAELGNSEVDFNVILSSIQILSAEHGF--ETWGNF 230 Query 64 PWARGRLFALLAGSGAKTPIVLSGDTHFAEFAGTPRTG 101 P +L L+ S K I+LSGD H +EF+ T +G Sbjct 231 PMEVEKLKDLIVASKVKNVILLSGDRHISEFSATEVSG 268 Lambda K H 0.319 0.134 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22460540320 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40