bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_3072_orf2
Length=160
Score E
Sequences producing significant alignments: (Bits) Value
7227.CG5823-PA 139 2e-32
> 7227.CG5823-PA
Length=283
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 88/126 (69%), Gaps = 1/126 (0%)
Query 30 SSSSSSSKMSSKGAVDRLRREWKSLQRESLPNVEARPQEDDFLTWIFLIHDLPEDSSFAG 89
SSSS+S AV R+++++ L+R+ LP + A P ++ L W + + PEDS + G
Sbjct 2 SSSSTSGGRKQPTAVSRMKQDYMRLKRDPLPYITAEPLPNNILEWHYCVKG-PEDSPYYG 60
Query 90 GFYMGKVVFPATYPFSPPSIYMLTPNGRFETNRSLCVSFTHYHPELWNPSWKVETLLTGF 149
G+Y G ++FP +PF PPSIYMLTPNGRF+TN LC+S + +HP+ WNP+W V T+LTG
Sbjct 61 GYYHGTLLFPREFPFKPPSIYMLTPNGRFKTNTRLCLSISDFHPDTWNPTWCVGTILTGL 120
Query 150 VSFMLD 155
+SFML+
Sbjct 121 LSFMLE 126
Lambda K H
0.314 0.127 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 26871144147
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40