bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_3196_orf1
Length=166
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd2_4350 67.8 1e-10
> 5807.cgd2_4350
Length=1281
Score = 67.8 bits (164), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 0/80 (0%)
Query 87 LYDEPRGSVGRRWRTFFLCYYGPFLMKRPVKIAVLTIFITIAAVSIYGFSKLELGLEISE 146
L EP G+VGR R L Y GP + VKI V+ I++ VSIYGF+K+E GL++ +
Sbjct 813 LLAEPSGNVGRTTRRLMLHYIGPVMATPIVKIIVIIIWLGFLGVSIYGFTKMESGLDLRD 872
Query 147 LAPVTSYMRRFDEIYAEYFN 166
L+P +SY++ FD+ + +YFN
Sbjct 873 LSPPSSYLQAFDQDFTKYFN 892
Lambda K H
0.324 0.138 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 29876498544
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40