bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eace_3300_orf1 Length=109 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd2_2700 60.5 2e-08 > 5807.cgd2_2700 Length=495 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 0/100 (0%) Query 10 KKLEPVPKPDEKLYRDRIQAETAAIDELWAKISELQQKISAVIGGREEYNMEKQNRQARL 69 K + VP PDEK Y++ +A ++E KI L + I+ GRE ++ +K QA+L Sbjct 29 KSIPVVPAPDEKTYKETTEAIRQVLNEWNIKIRGLTKMINDRSVGREAFDRKKSEFQAKL 88 Query 70 DALQKEIDQLEEKRKVLFEKIQLKQKEGADLKQSATDLRR 109 D QK I+ LEE+RK+ KI K KEG ++K + L++ Sbjct 89 DEYQKCIENLEEERKLCMAKINEKSKEGREMKANLQSLKK 128 Lambda K H 0.310 0.128 0.337 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22374500883 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40