bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_3384_orf2
Length=146
Score E
Sequences producing significant alignments: (Bits) Value
5085.AFUA_2G16640 63.9 1e-09
> 5085.AFUA_2G16640
Length=1017
Score = 63.9 bits (154), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/133 (33%), Positives = 57/133 (42%), Gaps = 26/133 (19%)
Query 10 LLLLHGSVQQQVLHTQGVLLQLLTISRRSAAFAGPRYRKRGLNDAGDAANEVEVEFVCMA 69
L ++HG V Q + G L L I+RRS FAG R+ KRG ND G AN+VE E +
Sbjct 357 LPIIHGYVDQAKIDVYGRLAYLTIIARRSRFFAGARFLKRGANDLGYVANDVETEQI--- 413
Query 70 TMPSRSASEAAALQAVAAAAAAAGTPAALWRQMLLRGGGAFEAAVASHVIARGSAPLMWC 129
SE + A A P S+V RGS PL W
Sbjct 414 ------VSEMSETSFHAPGPALYANP-----------------LYTSYVQHRGSIPLYWT 450
Query 130 QDTTVIPSRPRIQ 142
QD + + +P I+
Sbjct 451 QDNSGVSPKPDIE 463
Lambda K H
0.322 0.130 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22393349475
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40