bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eace_3388_orf1
Length=121
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd5_2400 125 5e-28
> 5807.cgd5_2400
Length=322
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
Query 1 PLASASIGQVHRAWLTDG-TAVVVKVQHADVESLLMHDMANLKQLSWAFGMLEQGMNFAP 59
P+A+ASI QVH+A L++G VV+K+Q+ +++ L HDM NL+QL+WAFG+LE +
Sbjct 125 PIAAASISQVHKAVLSEGEKKVVIKIQYPNIQETLNHDMKNLEQLTWAFGLLEDYSDSIH 184
Query 60 ILEEWQKAASKELDFRFEYAHQTRAYEAAQRSGIGVIIPKCYQNLVTKSVMVMEFIDGFK 119
IL EW+ +A ELDF+ E +Q RAYE + SGI +IIPK Y T+ ++ ME+I GF
Sbjct 185 ILNEWKSSAYSELDFKNELKNQKRAYEMFEDSGIEIIIPKVYTEYTTEKILTMEYIKGFN 244
Query 120 V 120
+
Sbjct 245 I 245
Lambda K H
0.322 0.132 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22998535989
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40