bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_0785_orf2
Length=150
Score E
Sequences producing significant alignments: (Bits) Value
Hs20357568 65.1 4e-11
At2g02770_2 56.6 1e-08
At3g11470 53.5 1e-07
CE06529 48.1 7e-06
CE04885 46.6 2e-05
SPAC17C9.02c 41.6 5e-04
YGL154c 33.9 0.12
CE13305 30.8 0.95
CE24434_1 30.8 1.1
SPAC1002.21 28.9 4.2
YHR149c 28.5 4.6
7294640 27.7 7.9
> Hs20357568
Length=309
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query 11 LHFNVSHDEGLVVFGASRHL-VGVDCMRCSPRGSRDTTQFLQQMKAHCTARDWAYIMGVR 69
+FN+SH V A L VG+D M+ S G +F MK T ++W I +
Sbjct 105 FNFNISHQGDYAVLAAEPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRSFK 164
Query 70 LPEQQIRRFMRVWTVKEAFVKAIGTGIYIDPERLE 104
Q+ F R W +KE+F+KAIG G+ + +RLE
Sbjct 165 DEWTQLDMFYRNWALKESFIKAIGVGLGFELQRLE 199
> At2g02770_2
Length=238
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query 11 LHFNVSHDEGLVVFGASRHL-VGVDCMRCSPRGSRDTTQFLQQMKAHCTARDWAYIMGVR 69
LHFN+SH + L+ G + H+ VG+D + D ++ +A + ++ +
Sbjct 119 LHFNISHTDSLISCGVTVHVPVGIDLEEMERKIKHDVLALAERF---YSADEVKFLSAIP 175
Query 70 LPEQQIRRFMRVWTVKEAFVKAIGTG 95
PE Q + F+++WT+KEA+VKA+G G
Sbjct 176 DPEVQRKEFIKLWTLKEAYVKALGKG 201
> At3g11470
Length=275
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query 11 LHFNVSHDEGLVVFGASRHL-VGVDCMRCSPRGSRDTTQFLQQMKAHCTARDWAYIMGVR 69
LHFN+SH + L+ G + H+ VG+D + D F ++ +A + ++ +
Sbjct 119 LHFNISHTDSLIACGVTVHVPVGIDVEDKERKIKHDILAFAERF---YSADEVKFLSTLP 175
Query 70 LPEQQIRRFMRVWTVK-EAFVKAIGTGIYIDP 100
PE Q + F+++WT+K EA+VKA+G G P
Sbjct 176 DPEVQRKEFIKLWTLKVEAYVKALGKGFSAAP 207
> CE06529
Length=299
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query 1 KPSLGETA-----EFLHFNVSHDEGLVVFGASRHLVGVDCMRCSPRGSRDTTQFLQQMKA 55
KPSL + + +NVSH LVV +GVD MR + ++ + +K
Sbjct 80 KPSLIQNKSDYSRQNFEYNVSHHGDLVVLATGDTRIGVDVMRVNEARRETASEQMNTLKR 139
Query 56 HCTARDWAYIMGVRLPE-QQIRRFMRVWTVKEAFVKAIGTGIYIDPERLEC-TFPASGS- 112
H + + + G E ++ F R+W +KE+ +KA G G+ P+ L TF S
Sbjct 140 HFSENEIEMVKGGDKCELKRWHAFYRIWCLKESILKATGVGL---PDGLHNHTFQVDSSY 196
Query 113 PQLSLDSIPQTDFHFRL 129
S S T ++ RL
Sbjct 197 DHASGHSTVSTQYYHRL 213
> CE04885
Length=297
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query 13 FNVSHDEGLVVFGAS-RHLVGVDCMRC-SPRGSRDTTQFLQQMKAHCTARDWAYIMGVRL 70
NVSH V F +S VGVD MR + R ++ +++ M + + +
Sbjct 100 LNVSHQGDYVAFASSCSSKVGVDVMRLDNERNNKTADEYINSMAKSASPEELRMMRSQPT 159
Query 71 PEQQIRRFMRVWTVKEAFVKAIGTGIYIDPERLE 104
++ F R W +KEA +KA G GI D L+
Sbjct 160 EAMKMTMFYRYWCLKEAILKATGVGIMKDLNSLD 193
> SPAC17C9.02c
Length=258
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 15/105 (14%)
Query 13 FNVSHDEGLVVF----------GASRHLVGVDCMRCSPRGSRDTTQFLQQMKAHCTARDW 62
FNVSH G+V+ G +GVD + C P +++ + T +W
Sbjct 95 FNVSHYGGIVIVVGAWLPSDPSGMRPINIGVDIVECKPLAFE--ASWMEDFMSVFTPCEW 152
Query 63 AYIMGVRLPEQQIRRFMRVWTVKEAFVKAIGTGIYIDPERLECTF 107
I + I F +WT KEA +KA+G G+ +P + TF
Sbjct 153 KLI---KSSISSIDVFFLLWTCKEAILKALGIGLSGNPLDIVVTF 194
> YGL154c
Length=272
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query 31 VGVDCMRCSPRGSRDTTQFLQQMKAHCTARDWAYIMGVRLPEQQIRRFMRVWTVKEAFVK 90
VG+D G R+ + +++ + R++ ++ P F +W++KE++ K
Sbjct 133 VGIDIASPCNYGGREELELFKEVFSE---REFNGLLKASDP---CTIFTYLWSLKESYTK 186
Query 91 AIGTGIYIDPERLE----CTFPASGSPQ-LSLDSIPQTDFHFRLEEEEAPDYVICVCV 143
GTG+ D ++ FPA G+ ++LD +P FH + E ++ +C+
Sbjct 187 FTGTGLNTDLSLIDFGAISFFPAEGASMCITLDEVPLI-FHSQWFNNE----IVTICM 239
> CE13305
Length=732
Score = 30.8 bits (68), Expect = 0.95, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 0/24 (0%)
Query 18 DEGLVVFGASRHLVGVDCMRCSPR 41
D + +FG+SRHL+G +C PR
Sbjct 548 DLAMFLFGSSRHLIGSSFQKCLPR 571
> CE24434_1
Length=670
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 0/25 (0%)
Query 108 PASGSPQLSLDSIPQTDFHFRLEEE 132
P S S LS D+IP DF R++EE
Sbjct 12 PQSRSSTLSYDNIPNFDFRLRMKEE 36
> SPAC1002.21
Length=148
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Query 17 HDEGLVVFGASRHLVGVDCMRCS-PRGSRDTTQFLQQMKAHCTARDWAYIMGV----RLP 71
H + SR V C R + PR D + L++ K C +W ++M V L
Sbjct 56 HRCAFLDLTKSRGRVVHACSRAALPRAIADASHCLEEKKFFCNVNNWNWLMSVSKYSHLQ 115
Query 72 EQQIRRFMRVW 82
E+ F++V+
Sbjct 116 EKNRTSFLQVF 126
> YHR149c
Length=734
Score = 28.5 bits (62), Expect = 4.6, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Query 82 WTVKEAFVKAIGTGIYIDPERLECTFPASGSPQLSLDSIPQTDFHFRLEEE 132
+ V+ A AIG Y+DP +L PQ S DS DF R++E+
Sbjct 163 YNVRSATPPAIGRSWYVDPFQL---------PQESNDSNSLRDFAMRVQED 204
> 7294640
Length=1290
Score = 27.7 bits (60), Expect = 7.9, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query 87 AFVKAIGTGIYIDPERLECTFPASGSPQLSLDSIPQTDFHFRLEEEEAPDYVIC 140
A++++ TG++ D CTF + PQ+ D Q+++ + E+ + +C
Sbjct 701 AYIQSCPTGLFYDATDQVCTFSGNCDPQVCND---QSEYFVSPDYEDPNSFCLC 751
Lambda K H
0.324 0.139 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1852391706
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40