bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eace_0811_orf1 Length=111 Score E Sequences producing significant alignments: (Bits) Value Hs4507293 56.2 2e-08 SPBPI051 48.5 3e-06 SPBC8D2.14c 48.5 3e-06 At5g05760 48.1 4e-06 CE05944 40.8 6e-04 7298290 36.2 0.015 Hs20542220 30.4 0.76 SPAC11D3.15 26.9 9.9 > Hs4507293 Length=301 Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 1/92 (1%) Query 7 DRTEEFLAAAESFQLPGGGAQNDTQRHFSDADR-HFNALASEMGNALHATSLKLQELGKL 65 DRT+EFL+A +S Q G Q + + R F +A +G L T KL++L L Sbjct 5 DRTQEFLSACKSLQTRQNGIQTNKPALRAVRQRSEFTLMAKRIGKDLSNTFAKLEKLTIL 64 Query 66 ARQCGIYNVKTVQIPELTFDIRKTINALNCKV 97 A++ +++ K V+I ELT+ I++ IN+LN ++ Sbjct 65 AKRKSLFDDKAVEIEELTYIIKQDINSLNKQI 96 > SPBPI051 Length=309 Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 16/109 (14%) Query 7 DRTEEF----------LAAAESFQLPGGGAQNDTQRHFSDADRHFNALASEMGNALHATS 56 DRT EF L + Q GG Q Q+ F +A ++ N ++ T Sbjct 5 DRTAEFQACVTKTRSRLRTTTANQAVGGPDQTKHQKS------EFTRIAQKIANQINQTG 58 Query 57 LKLQELGKLARQCGIYNVKTVQIPELTFDIRKTINALNCKVDVFARAVE 105 KLQ+L +LA++ +++ + V+I ELTF I++++++LN + + V+ Sbjct 59 EKLQKLSQLAKRKTLFDDRPVEIQELTFQIKQSLSSLNSDIASLQQVVK 107 > SPBC8D2.14c Length=309 Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 16/109 (14%) Query 7 DRTEEF----------LAAAESFQLPGGGAQNDTQRHFSDADRHFNALASEMGNALHATS 56 DRT EF L + Q GG Q Q+ F +A ++ N ++ T Sbjct 5 DRTAEFQACVTKTRSRLRTTTANQAVGGPDQTKHQKS------EFTRIAQKIANQINQTG 58 Query 57 LKLQELGKLARQCGIYNVKTVQIPELTFDIRKTINALNCKVDVFARAVE 105 KLQ+L +LA++ +++ + V+I ELTF I++++++LN + + V+ Sbjct 59 EKLQKLSQLAKRKTLFDDRPVEIQELTFQIKQSLSSLNSDIASLQQVVK 107 > At5g05760 Length=336 Score = 48.1 bits (113), Expect = 4e-06, Method: Composition-based stats. Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 0/60 (0%) Query 35 SDADRHFNALASEMGNALHATSLKLQELGKLARQCGIYNVKTVQIPELTFDIRKTINALN 94 S FN AS +G + TS K+ L KLA+Q I+N +TV+I ELT IR I LN Sbjct 41 SSPGSEFNKKASRIGLGIKETSQKITRLAKLAKQSTIFNDRTVEIQELTVLIRNDITGLN 100 > CE05944 Length=413 Score = 40.8 bits (94), Expect = 6e-04, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 3/93 (3%) Query 7 DRTEEFLAAAESFQLPGG--GAQNDTQRHFSDADRHFNALASEMGNALHATSLKLQELGK 64 DRT EF A A+S+++ G + + FN LA +G L T K+++L + Sbjct 111 DRTSEFRATAKSYEMKAAANGIRPQPKHEMLSESVQFNQLAKRIGKELSQTCAKMEKLAE 170 Query 65 LARQCGIYNVKTVQIPELTFDIRKTINALNCKV 97 A++ Y ++ QI L+ ++ I LN ++ Sbjct 171 YAKKKSCYEERS-QIDHLSSIVKSDITGLNKQI 202 > 7298290 Length=310 Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 14/100 (14%) Query 7 DRTEEFLAAAESFQLPGGGAQNDTQR-HFSDADR--------HFNALASEMGNALHATSL 57 DRT EF A S Q A+N T+ + D + F +A +G + +T Sbjct 5 DRTGEFANAIRSLQ-----ARNITRAVNIRDPRKAKQVQSYSEFMMVARFIGKNIASTYA 59 Query 58 KLQELGKLARQCGIYNVKTVQIPELTFDIRKTINALNCKV 97 KL++L LA++ +++ + +I ELT+ I+ +NALN ++ Sbjct 60 KLEKLTMLAKKKSLFDDRPQEIQELTYIIKGDLNALNQQI 99 > Hs20542220 Length=170 Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Query 35 SDADRHFNALASEMGNALHATSLKLQELGKLARQCGIYNVKTVQIP--ELTFDIRKTINA 92 S+A++ F+ A+ ++ T + + KL + CGI + KTV ++ F K NA Sbjct 3 SEAEKTFHRFAAFGESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKVKAKNA 62 Query 93 LNCKVDVFARAVENAG 108 F AV+ G Sbjct 63 RTITFQQFKEAVKELG 78 > SPAC11D3.15 Length=1317 Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust. Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 0/35 (0%) Query 41 FNALASEMGNALHATSLKLQELGKLARQCGIYNVK 75 F A+A +MG AL TS+ +L C +++ K Sbjct 760 FMAVAEQMGRALQKTSVSTNVKERLDYSCALFDAK 794 Lambda K H 0.317 0.133 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1192473466 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40