bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_1079_orf2
Length=135
Score E
Sequences producing significant alignments: (Bits) Value
YKL116c 42.0 3e-04
At1g53050 35.8 0.025
CE24774 34.3 0.063
Hs14770402 33.5 0.11
7292540 33.5 0.13
At1g09000 33.1 0.16
At5g11410 32.7 0.18
At2g43830 32.7 0.19
Hs6382062 32.3 0.24
Hs6382060 32.3 0.26
At1g54960 32.3 0.28
CE29341 32.0 0.34
At3g06030 32.0 0.37
At5g50000 31.6 0.45
CE28667 31.6 0.45
SPBC337.04 31.6 0.47
CE27768 30.4 1.1
CE23838 30.0 1.2
7302464 30.0 1.4
At5g66790 28.5 3.5
> YKL116c
Length=518
Score = 42.0 bits (97), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 12/68 (17%)
Query 4 EETVSLQE--LQQEVQQLQSLDHPCIVKLLGVSLLSSSCCCSAPLPAAAKPQPCCSNLYP 61
+ET+S E L +E+Q L+SL+HPCIVKLLG+ + P+ +K +P C +
Sbjct 246 KETLSRLENSLTRELQVLKSLNHPCIVKLLGI---------NNPIFVTSK-KPLCDLIIK 295
Query 62 CPSTPPYC 69
P P C
Sbjct 296 TPRALPPC 303
> At1g53050
Length=694
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query 5 ETVSLQELQQEVQQLQSLDHPCIVKLLGVSLLSSSCCCS 43
E S++ + +E+Q L+ LDHP I+KL G L++S CS
Sbjct 171 EPESVRFMAREIQILRRLDHPNIIKLEG--LVTSRMSCS 207
> CE24774
Length=902
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 22/29 (75%), Gaps = 0/29 (0%)
Query 11 ELQQEVQQLQSLDHPCIVKLLGVSLLSSS 39
+L+QE++ + + DHP ++KL+GV + +S
Sbjct 611 QLEQEIRAVATFDHPNVIKLIGVCYMDNS 639
> Hs14770402
Length=926
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 0/29 (0%)
Query 5 ETVSLQELQQEVQQLQSLDHPCIVKLLGV 33
+ V+L+++ +EVQ ++ LDHP I+KL V
Sbjct 57 DAVNLEKIYREVQIMKMLDHPHIIKLYQV 85
> 7292540
Length=4680
Score = 33.5 bits (75), Expect = 0.13, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 9/87 (10%)
Query 54 PCCSNLYPCPSTPPYCTCRSCANCCRTH--------AAAAATATAAAAAAAATEAAAGRL 105
P N P P+TP Y SC C R+ A A T ++ AT +
Sbjct 4582 PVYLNSTPTPATPFYWMKISCTQCWRSSGQHCGWEAAFVAITCMPPLRSSGATRPWFWWM 4641
Query 106 RISACLSCLCCCGVQAVPTAAAAAASN 132
R A LS C G++ P AA+AS+
Sbjct 4642 R-PAALSRTACYGLEFPPPRCAASASS 4667
> At1g09000
Length=666
Score = 33.1 bits (74), Expect = 0.16, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 22/30 (73%), Gaps = 0/30 (0%)
Query 3 EEETVSLQELQQEVQQLQSLDHPCIVKLLG 32
E+ +QEL++EV+ L++L HP IV+ LG
Sbjct 110 EKTQAHIQELEEEVKLLKNLSHPNIVRYLG 139
> At5g11410
Length=336
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 0/30 (0%)
Query 3 EEETVSLQELQQEVQQLQSLDHPCIVKLLG 32
++ + +LQ+ ++EV+ L + HP +VKLLG
Sbjct 92 QDNSQTLQDWKEEVKSLGRISHPNLVKLLG 121
> At2g43830
Length=250
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 0/32 (0%)
Query 1 GAEEETVSLQELQQEVQQLQSLDHPCIVKLLG 32
GA+ ET L ++EVQ L++L HP IV+ LG
Sbjct 126 GAKVETKVLVAREEEVQLLKNLSHPNIVRYLG 157
> Hs6382062
Length=1182
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 0/31 (0%)
Query 3 EEETVSLQELQQEVQQLQSLDHPCIVKLLGV 33
+E+T+ ++E +E ++ + HP +V+LLGV
Sbjct 320 KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 350
> Hs6382060
Length=1146
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 0/31 (0%)
Query 3 EEETVSLQELQQEVQQLQSLDHPCIVKLLGV 33
+E+T+ ++E +E ++ + HP +V+LLGV
Sbjct 284 KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 314
> At1g54960
Length=585
Score = 32.3 bits (72), Expect = 0.28, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 22/30 (73%), Gaps = 0/30 (0%)
Query 3 EEETVSLQELQQEVQQLQSLDHPCIVKLLG 32
E+ +QEL++EV+ L++L HP IV+ LG
Sbjct 109 EKTQAHIQELEEEVKLLKNLSHPNIVRYLG 138
> CE29341
Length=1030
Score = 32.0 bits (71), Expect = 0.34, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 0/31 (0%)
Query 9 LQELQQEVQQLQSLDHPCIVKLLGVSLLSSS 39
+ E +E + + DHP I+KL+GV+L SS
Sbjct 774 ISEFYEEARTMSEFDHPNILKLIGVALDDSS 804
> At3g06030
Length=651
Score = 32.0 bits (71), Expect = 0.37, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 0/37 (0%)
Query 3 EEETVSLQELQQEVQQLQSLDHPCIVKLLGVSLLSSS 39
E+ ++EL++EVQ L++L HP IV+ LG S S
Sbjct 109 EKTQGHIRELEEEVQLLKNLSHPNIVRYLGTVRESDS 145
> At5g50000
Length=385
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query 2 AEEETVSLQ-ELQQEVQQLQSLDHPCIVKLLGVSLLSSSCCC---SAPLPAAAKPQPCC 56
+E E VSL+ + QEV LDHP + K +G ++ +S S PL A P C
Sbjct 120 SEAEIVSLRADFAQEVAVWHKLDHPNVTKFIGATMGASGLQLQTESGPL---AMPNNIC 175
> CE28667
Length=1086
Score = 31.6 bits (70), Expect = 0.45, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 0/31 (0%)
Query 9 LQELQQEVQQLQSLDHPCIVKLLGVSLLSSS 39
+ E +E + + DHP I+KL+GV+L SS
Sbjct 774 ISEFYEEARTMSEFDHPNILKLIGVALDDSS 804
> SPBC337.04
Length=413
Score = 31.6 bits (70), Expect = 0.47, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 0/35 (0%)
Query 4 EETVSLQELQQEVQQLQSLDHPCIVKLLGVSLLSS 38
E+ ++ +QE+ L++L HPC+V+LL + S+
Sbjct 144 EKKARVKVFRQEIWALKTLSHPCVVQLLNYYVSSA 178
> CE27768
Length=1096
Score = 30.4 bits (67), Expect = 1.1, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 0/26 (0%)
Query 8 SLQELQQEVQQLQSLDHPCIVKLLGV 33
SLQ+L +EV+ ++ LDHP IVKL V
Sbjct 162 SLQKLFREVKIMKQLDHPNIVKLYQV 187
> CE23838
Length=1192
Score = 30.0 bits (66), Expect = 1.2, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 0/26 (0%)
Query 8 SLQELQQEVQQLQSLDHPCIVKLLGV 33
SLQ+L +EV+ ++ LDHP IVKL V
Sbjct 210 SLQKLFREVKIMKQLDHPNIVKLYQV 235
> 7302464
Length=739
Score = 30.0 bits (66), Expect = 1.4, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 0/26 (0%)
Query 8 SLQELQQEVQQLQSLDHPCIVKLLGV 33
SLQ+L +EV+ ++ LDHP IVKL V
Sbjct 191 SLQKLFREVRIMKMLDHPNIVKLFQV 216
> At5g66790
Length=622
Score = 28.5 bits (62), Expect = 3.5, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 8/41 (19%)
Query 4 EETVSLQELQQEVQQLQSLDHPCIVKLLGVSLLSSSCCCSA 44
++T S+ ++ E++ L S+ HP +V+LLG CC A
Sbjct 347 KDTTSIDQVVNEIKLLSSVSHPNLVRLLG--------CCFA 379
Lambda K H
0.319 0.123 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1388795348
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40