bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_1311_orf1
Length=101
Score E
Sequences producing significant alignments: (Bits) Value
At1g57720_2 55.8 2e-08
At1g09640_2 55.8 2e-08
SPAC29A4.02c_2 53.1 1e-07
YPL048w_2 53.1 1e-07
YKL081w_2 52.0 2e-07
Hs4503481_2 50.8 6e-07
Hs20540877_2 50.8 6e-07
7303236 28.9 2.6
7294427 26.9 9.9
> At1g57720_2
Length=159
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query 20 VVESSLDMNEWKKVYSNTQ-DLRGVAMKWLWDHVD-EHCSFFLMEYEKIEGECTVTYLTS 77
+ S + +++WK++YSNT+ + R VA+K WD D E S + +Y K E V+++T
Sbjct 6 LPPSPMVLDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDY-KYNDENMVSFVTL 64
Query 78 NQLGGFLQRVDNSMRKDSFA 97
N++GGFLQR+D + RK SF
Sbjct 65 NKVGGFLQRMDLA-RKYSFG 83
> At1g09640_2
Length=159
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query 20 VVESSLDMNEWKKVYSNTQ-DLRGVAMKWLWDHVD-EHCSFFLMEYEKIEGECTVTYLTS 77
+ S + +++WK++YSNT+ + R VA+K WD D E S + +Y K E V+++T
Sbjct 6 LPPSPMVLDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDY-KYNDENMVSFVTL 64
Query 78 NQLGGFLQRVDNSMRKDSFA 97
N++GGFLQR+D + RK SF
Sbjct 65 NKVGGFLQRMDLA-RKYSFG 83
> SPAC29A4.02c_2
Length=156
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query 18 AQVVESSLDMNEWKKVYSNTQDLRGVAMKWLWDHVD-EHCSFFLMEYEKIEGECTVTYLT 76
A S D+ E+K+VYSN QD R A+ W ++H D E+ S + ++Y E ++T
Sbjct 3 ASAPNGSFDIEEYKRVYSN-QDTRSGALPWFFEHFDPENYSVWKVDYSYPEDLKQPVFMT 61
Query 77 SNQLGGFLQRVDNSMR 92
+N +GGF QR++ S +
Sbjct 62 NNLIGGFFQRLEASRK 77
> YPL048w_2
Length=160
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query 22 ESSLDMNEWKKVYSNTQDLRGVAMKWLWDHVD-EHCSFFLMEYEKIEGECTVTYLTSNQL 80
+S+ +++WK+ YSN +D R VA+ W W+H + E S + + Y K E T+T++++N +
Sbjct 8 KSTFVLDDWKRKYSN-EDTRPVALPWFWEHYNPEEYSLWKVTY-KYNDELTLTFMSNNLV 65
Query 81 GGFLQRVDNSMR 92
GGF R+ S +
Sbjct 66 GGFFNRLSASTK 77
> YKL081w_2
Length=159
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query 22 ESSLDMNEWKKVYSNTQDLRGVAMKWLWDHVD-EHCSFFLMEYEKIEGECTVTYLTSNQL 80
+S+ +++WK+ YSN D R VA+ W W+H + E S + + Y K E T+T++++N +
Sbjct 7 KSTFVLDDWKRKYSN-DDTRPVALPWFWEHYNPEEYSIWKVGY-KYNDELTLTFMSNNLV 64
Query 81 GGFLQRVDNSMR 92
GGF R+ S +
Sbjct 65 GGFFNRLSASTK 76
> Hs4503481_2
Length=179
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query 4 QQQQQQQQQQQAAAAQVVESSLDMNEWKKVYSNTQDLRGVAMKWLWDHVD-EHCSFFLME 62
+Q + + + A + +S+ ++E+K+ YSN +D VA+ + W+H D + S + E
Sbjct 9 EQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSN-EDTLSVALPYFWEHFDKDGWSLWYSE 67
Query 63 YEKIEGECTVTYLTSNQLGGFLQRVDNSMRKDSFAVI 99
Y + E T T+++ N + G QR+D +RK++FA +
Sbjct 68 Y-RFPEELTQTFMSCNLITGMFQRLDK-LRKNAFASV 102
> Hs20540877_2
Length=179
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query 4 QQQQQQQQQQQAAAAQVVESSLDMNEWKKVYSNTQDLRGVAMKWLWDHVD-EHCSFFLME 62
+Q + + + A + +S+ ++E+K+ YSN +D VA+ + W+H D + S + E
Sbjct 9 EQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSN-EDTLSVALPYFWEHFDKDGWSLWYSE 67
Query 63 YEKIEGECTVTYLTSNQLGGFLQRVDNSMRKDSFAVI 99
Y + E T T+++ N + G QR+D +RK++FA +
Sbjct 68 Y-RFPEELTQTFMSCNLITGMFQRLDK-LRKNAFASV 102
> 7303236
Length=1478
Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query 1 QQQQQQQQQQQQQQAAAAQVVESSLDMNEWKKVYSNTQDLRGVAMKW 47
QQ+ +++ + +AA V+SS + + K+Y++ Q+LR V M W
Sbjct 754 QQKLKKRTENDAVTSAAIDGVQSSFNPSANAKIYASPQELRNV-MAW 799
> 7294427
Length=1798
Score = 26.9 bits (58), Expect = 9.9, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query 56 CSFFLMEYEKIEGECTVTYL-TSNQLGGFLQRV 87
C+F+++EY++ +G+ +L T Q GG ++RV
Sbjct 1319 CTFYIVEYDETDGDELPIWLDTIRQFGGDIERV 1351
Lambda K H
0.316 0.126 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1184494980
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40