bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eace_1946_orf1 Length=84 Score E Sequences producing significant alignments: (Bits) Value YMR308c 32.7 0.17 ECU10g1240 31.6 0.36 Hs11863152 29.3 1.9 At5g63220 28.9 2.5 At5g19820 28.9 2.6 HsM4504909 28.5 3.3 Hs21361131 28.5 3.6 At2g10140 27.3 6.2 7290280 26.9 8.2 > YMR308c Length=1089 Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query 17 LLEGTLSDDCGVRRQAEASLSE--LKETAADMFICYLLETLSMHPEEQLRLQAAVLLRSL 74 +++ S D +R AE +LSE + E + + +L E + + + +AVL R L Sbjct 15 IVQAFASPDNQIRSVAEKALSEEWITENNIEYLLTFLAEQAAFSQDTTVAALSAVLFRKL 74 Query 75 AFRGPLSSK 83 A + P SSK Sbjct 75 ALKAPPSSK 83 > ECU10g1240 Length=854 Score = 31.6 bits (70), Expect = 0.36, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query 9 MDASKFCSLLEGTLSDDCGVRRQAEASLSELKETAADMFICYLLETL-SMHPEEQLRLQA 67 MD + L L D G ++AEA + EL+ + FI L+E + +QLR+ + Sbjct 27 MDRRGLEACLYEVLKSDPGAGKRAEARILELQSGDFERFISMLVEVFCDLKSNDQLRMVS 86 Query 68 AVLLRS 73 ++L++ Sbjct 87 GIILKN 92 > Hs11863152 Length=1246 Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 7/66 (10%) Query 22 LSDDCGVRRQAEASLSELKETAADMFICYLLETLSMHPEEQLRLQAAVLLRSLAF---RG 78 L+D + R A+ L++L+E + YLL S+ PEE RL+ VL+ +G Sbjct 680 LADMLRIPRTAQDRLAKLQEA----YCQYLLSYDSLSPEEHRRLEKEVLMEKEILEKRKG 735 Query 79 PLSSKT 84 PL T Sbjct 736 PLEGHT 741 > At5g63220 Length=316 Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust. Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 0/28 (0%) Query 28 VRRQAEASLSELKETAADMFICYLLETL 55 +++QAE EL E+ FI YLLETL Sbjct 233 IKKQAETKNPELSESDLIQFISYLLETL 260 > At5g19820 Length=1116 Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 0/71 (0%) Query 7 LKMDASKFCSLLEGTLSDDCGVRRQAEASLSELKETAADMFICYLLETLSMHPEEQLRLQ 66 L D++ F +L+ +S R AE+ + K++ D L L + P + R Sbjct 17 LGSDSAPFETLISHLMSSSNEQRSSAESLFNLAKQSNPDTLSLKLAHLLQLSPHPEGRAM 76 Query 67 AAVLLRSLAFR 77 AAVLLR L R Sbjct 77 AAVLLRKLLTR 87 > HsM4504909 Length=1097 Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%) Query 10 DASKFCSLLEGTLSDDCGVRRQAEASLSELKETAADMFICYLLETL-SMHPEEQLRLQAA 68 + +F LL LS D VR+QAE + + + I +LL+ + + E+ R AA Sbjct 7 EQQQFYLLLGNLLSPDNVVRKQAEETYENIPGQSK---ITFLLQAIRNTTAAEEARQMAA 63 Query 69 VLLRSL 74 VLLR L Sbjct 64 VLLRRL 69 > Hs21361131 Length=1097 Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%) Query 10 DASKFCSLLEGTLSDDCGVRRQAEASLSELKETAADMFICYLLETL-SMHPEEQLRLQAA 68 + +F LL LS D VR+QAE + + + I +LL+ + + E+ R AA Sbjct 7 EQQQFYLLLGNLLSPDNVVRKQAEETYENIPGQSK---ITFLLQAIRNTTAAEEARQMAA 63 Query 69 VLLRSL 74 VLLR L Sbjct 64 VLLRRL 69 > At2g10140 Length=663 Score = 27.3 bits (59), Expect = 6.2, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 9/53 (16%) Query 5 KPLKMDASKFCSLLEG---TLSDDCGVRRQAEASL---SELKETAADMFICYL 51 +P++ ++KF LLEG TL D C R+ ++ L S L A +CY Sbjct 157 EPVRNHSNKFYDLLEGANNTLYDYC---REGQSQLSLASRLMHNKAGTIVCYF 206 > 7290280 Length=501 Score = 26.9 bits (58), Expect = 8.2, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query 16 SLLEGTLSDDCGVRRQAEASLSELKETAADMFICYLLETLSMHPEEQLRLQAAV 69 S ++G D +R + + + E +T I + L +S HPE Q RLQ + Sbjct 289 STIDGAPLSDEDIREEVDTFMFEGHDTTTSA-ISFCLYEISRHPEVQQRLQQEI 341 Lambda K H 0.318 0.131 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1197406694 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40