bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_2384_orf1
Length=125
Score E
Sequences producing significant alignments: (Bits) Value
7295083 33.9 0.075
CE05155 33.1 0.14
At1g16650 32.3 0.20
SPBC1A4.09 32.0 0.27
YOR243c 31.6 0.39
SPAC17G6.08 30.4 0.92
> 7295083
Length=734
Score = 33.9 bits (76), Expect = 0.075, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 20/26 (76%), Gaps = 0/26 (0%)
Query 66 RDFIEERMHAVSSLGFLNYFGLQRFG 91
R+ IE+ + ++ GF+NY+GLQRFG
Sbjct 337 REEIEQALQSLKERGFINYYGLQRFG 362
> CE05155
Length=577
Score = 33.1 bits (74), Expect = 0.14, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 0/35 (0%)
Query 68 FIEERMHAVSSLGFLNYFGLQRFGAKKQRQQQLVL 102
+ +R+ + GF+NYFG QRFG++ ++ L
Sbjct 253 LLHQRLETFQNTGFINYFGTQRFGSRSSTTAEIGL 287
> At1g16650
Length=529
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query 20 EEASSSSSSTASNNNSSSSSSTDSSSSSSRRGCGVHALEVAEVSALRDFIE-ERMHAVSS 78
+E SS S+ S S SS+D++ S S G+HA V+ LR F+E E + A+ S
Sbjct 241 DETDSSGSALNEEGQSRSQSSSDANRSCSLVLAGLHACGDLSVTMLRTFMECEEVKALVS 300
Query 79 LG 80
+G
Sbjct 301 IG 302
> SPBC1A4.09
Length=680
Score = 32.0 bits (71), Expect = 0.27, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 0/33 (0%)
Query 59 VAEVSALRDFIEERMHAVSSLGFLNYFGLQRFG 91
V V ++ + E ++++ GF+NYFGLQRFG
Sbjct 337 VRNVITPKEKVVEALNSLKEHGFINYFGLQRFG 369
> YOR243c
Length=676
Score = 31.6 bits (70), Expect = 0.39, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query 60 AEVSALRDFIEERMHAVSSLGFLNYFGLQRFG 91
+EVS L + + ++S GF+NYFG+QRFG
Sbjct 319 SEVS-LEEIVSNGCKSLSENGFINYFGMQRFG 349
> SPAC17G6.08
Length=536
Score = 30.4 bits (67), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 0/47 (0%)
Query 24 SSSSSTASNNNSSSSSSTDSSSSSSRRGCGVHALEVAEVSALRDFIE 70
SS+ S S N S+S+ +DSS+ C + LE+ +SAL D ++
Sbjct 13 SSNLSNHSGTNLSTSAQSDSSNIVKATECPICGLELPNLSALNDHLD 59
Lambda K H
0.315 0.122 0.340
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1183965632
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40