bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_2444_orf1
Length=71
Score E
Sequences producing significant alignments: (Bits) Value
7292130 40.0 0.001
Hs22049504 37.0 0.008
CE25503 33.5 0.098
CE06626 28.9 2.3
Hs13994343 28.1 4.0
At3g10550 26.9 9.9
> 7292130
Length=1430
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 0/46 (0%)
Query 25 DRGRMRAIELKVTELQVQLEDQSISKEEIASRCDALRQKLLEEHKT 70
D R R IE+K EL+ LE Q + EEI S+ D+ RQKL+ + KT
Sbjct 58 DHDRKRKIEVKCLELEDILEKQGRTPEEIKSQVDSFRQKLMGQGKT 103
> Hs22049504
Length=154
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 0/42 (0%)
Query 25 DRGRMRAIELKVTELQVQLEDQSISKEEIASRCDALRQKLLE 66
D R R +ELK ELQ +E+Q S+EEI + RQ L+E
Sbjct 56 DHERKRRVELKCMELQEMMEEQGYSEEEIRQKVGTFRQMLME 97
> CE25503
Length=425
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 0/43 (0%)
Query 25 DRGRMRAIELKVTELQVQLEDQSISKEEIASRCDALRQKLLEE 67
D R R IE+K TE ++ LED+ + E+I + R+ LL++
Sbjct 58 DHNRKRQIEVKCTEFEMLLEDKGLDDEDIERKVGEYRKNLLKQ 100
> CE06626
Length=1278
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query 18 SQEARESDRGRMRAIELKVTELQVQLEDQSISKEEIASRCDALRQKLLEEHKTT 71
S E R S+ R R I+ K+TEL+ Q+ D+ I+KE++ + D + LL +H+ T
Sbjct 301 SFELRSSEEVRSRLIQ-KITELEKQIGDERIAKEQLQAWQDE-NKVLLSDHQDT 352
> Hs13994343
Length=592
Score = 28.1 bits (61), Expect = 4.0, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query 4 NEGAAASEATAAAESQEARESDRGRMRAIE------LKVTELQVQLEDQSISKEEIASRC 57
NEG AS AT + +A +SDRG + A + L T ++ ED S+ ++ ++ R
Sbjct 422 NEGGEASNATHGNSNIDAAKSDRGGLDAPDCLPYDSLSFTS-RMYNEDDSVVEKAVSVRP 480
Query 58 DALRQKLLE 66
+A LE
Sbjct 481 EAAPASQLE 489
> At3g10550
Length=609
Score = 26.9 bits (58), Expect = 9.9, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query 19 QEARESDRG-RMRAIELKVTELQVQLEDQSISKEEIASRCDALRQKLLEE 67
+EA+ +D G + RA+ +K +E+Q + E +EI+ ++L +LL E
Sbjct 426 EEAKAADIGVQCRAMTVKYSEMQKEKEAAERRVDEISFAMESLSAELLRE 475
Lambda K H
0.301 0.115 0.278
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1194057928
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40