bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eace_2985_orf1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
SPAC16.03c 79.3 2e-15
YLR420w 76.6 1e-14
At4g22930 47.8 5e-06
7298800 36.6 0.010
Hs18597149 30.0 1.2
At5g24280 28.5 3.6
Hs4506219 28.1 4.1
SPBC725.11c 27.3 6.8
> SPAC16.03c
Length=337
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query 30 LEYRNELLKRDPKVNYLMTLYLCPDVDPHDLAKNAKASHVVGVKLYPRGVTTNSEAGVED 89
L+Y+ E+ + D K YLM+LYL P+ P + + AK + GVK YP+G TTNSE+GVE
Sbjct 53 LQYKKEIEQLDSKTTYLMSLYLSPETTPEVIYEAAKKG-IRGVKSYPKGATTNSESGVES 111
Query 90 LTAFDGVFEALQRCGLSLHIHAESP 114
F F A+Q G+ L+IH E P
Sbjct 112 YEPFYPTFAAMQETGMILNIHGEVP 136
> YLR420w
Length=364
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query 28 QALEYRNELLKRDPKVNYLMTLYLCPDVDPHDLAKNAKASHVV-GVKLYPRGVTTNSEAG 86
+ +EY+ L K PK +LM+ YL D+ P DL A H + GVK YP GVTTNS AG
Sbjct 53 RVIEYKKTLQKLAPKTTFLMSFYLSKDLTP-DLIHEAAQQHAIRGVKCYPAGVTTNSAAG 111
Query 87 VE--DLTAFDGVFEALQRCGLSLHIHAESPT 115
V+ D +AF +F+A+Q L L++H E P+
Sbjct 112 VDPNDFSAFYPIFKAMQEENLVLNLHGEKPS 142
> At4g22930
Length=377
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query 12 KCVCMSSSGNSLWDPSQALEYRNELLKRDPK---VNYLMTLYLCPDVDPHDLAKNAKASH 68
+ + M + + + A+ YR ++K P + LMTLYL P ++ ++
Sbjct 66 RAIVMPNLKPPVTSTAAAIIYRKFIMKALPSESSFDPLMTLYLTDKTLPEEIRLARESGV 125
Query 69 VVGVKLYPRGVTTNSEAGVEDLTAFDG---VFEALQRCGLSLHIHAE 112
V VKLYP G TTNS+ GV DL F V E + + + L +H E
Sbjct 126 VYAVKLYPAGATTNSQDGVTDL--FGKCLPVLEEMVKQNMPLLVHGE 170
> 7298800
Length=568
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query 32 YRNELLKRDPKVNYLMTLYLCPDVDPHDLAKNAKASHVVGVKLYPRGVTTNSEAGVEDLT 91
Y ELLK +P + LY V+ +N A +V PRG+T ++ + DL
Sbjct 367 YMLELLKHEPAMVLPHELYQSMSVE----ERNTAADVLVKYHYGPRGITKSNITQILDLF 422
Query 92 AFDGVFEALQRCGLSLHIHAESPT 115
++ + + R LS HA++PT
Sbjct 423 SYKLFWHGIHRVVLSRLSHAQAPT 446
> Hs18597149
Length=987
Score = 30.0 bits (66), Expect = 1.2, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query 27 SQALEYRNELLKRDPKVNYLMTLYLCPDVDPHDLAKNAKASHVVGVKLYPRGVTTNSEAG 86
S+ L++ +E++K +P++ L D LAK + SH+V + L+ NS +
Sbjct 442 SKDLKFDDEVIKMEPRIKARPKLISLDDKTILSLAKTSVYSHIVSLNLH-----GNSLSK 496
Query 87 VEDLTAFDGV 96
+ DL+ G+
Sbjct 497 LRDLSKLTGL 506
> At5g24280
Length=1634
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query 32 YRNELLKRDPKVNYLMTLYLCPDVDPHDLAKNAKASHVVGVKLYPRGVTTNSEAGVEDLT 91
+RN L++ DP+ M P+ DP K A +++ + + ++S G+ + T
Sbjct 1463 WRNGLVRNDPQKRLAMDNPYLPNGDPIPGFK-GYAVNMIDLASEELDIQSSSGYGLRE-T 1520
Query 92 AFDGVFEALQRCGLSLHIHAESP 114
F GVF LQ + H+ A P
Sbjct 1521 LFYGVFRELQVYETAEHLEAALP 1543
> Hs4506219
Length=422
Score = 28.1 bits (61), Expect = 4.1, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query 4 ASMSSPCLKCVCMSSSGNSLWDPSQAL-EYRNELLKRDPKVN-YLMTLY 50
A + LKCV +S SL D +AL +YR E L+ DP ++ +L LY
Sbjct 280 AGRQTEALKCVAQASKNRSLADFEKALTDYRAE-LRDDPIISTHLAKLY 327
> SPBC725.11c
Length=334
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query 17 SSSGNSLWDPSQALEYRNELLKRDPKVNYLMTLYLCPDVDPHDLAKNAKASHVVGVKLYP 76
S S + + P ++ + L DP L L D+DP +L N + S ++G + YP
Sbjct 267 SVSAGAAFIPHNPMDSIDHLDVNDPTATGLPVLPAS-DIDPLNLTGNTQDSMIIGQQTYP 325
Lambda K H
0.316 0.130 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1187579072
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40