bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eace_2993_orf5 Length=60 Score E Sequences producing significant alignments: (Bits) Value SPCC1020.06c 90.9 5e-19 YLR354c 82.8 1e-16 Hs5803187 82.0 2e-16 7291684 80.5 7e-16 YGR043c 80.1 1e-15 CE28974 75.9 2e-14 At1g12230 46.2 1e-05 At5g13420 29.6 1.4 7300898 29.3 1.7 CE26739 28.1 3.6 > SPCC1020.06c Length=322 Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 41/58 (70%), Positives = 51/58 (87%), Gaps = 0/58 (0%) Query 3 RERILIKIAATWEGIQAAKQLKEENINCNITLLFSLCQAIAASDAGAYLVSPFVGRIL 60 RER+LIKIA+T+EGIQAAKQL+EE I+CN+TLLFS QA+A ++A L+SPFVGRIL Sbjct 126 RERVLIKIASTYEGIQAAKQLEEEGIHCNLTLLFSFVQAVACAEANVTLISPFVGRIL 183 > YLR354c Length=335 Score = 82.8 bits (203), Expect = 1e-16, Method: Composition-based stats. Identities = 39/60 (65%), Positives = 53/60 (88%), Gaps = 1/60 (1%) Query 2 TRERILIKIAATWEGIQAAKQLKEEN-INCNITLLFSLCQAIAASDAGAYLVSPFVGRIL 60 ++ER+LIKIA+TWEGIQAAK+L+E++ I+CN+TLLFS QA+A ++A L+SPFVGRIL Sbjct 137 SKERVLIKIASTWEGIQAAKELEEKDGIHCNLTLLFSFVQAVACAEAQVTLISPFVGRIL 196 > Hs5803187 Length=337 Score = 82.0 bits (201), Expect = 2e-16, Method: Composition-based stats. Identities = 37/60 (61%), Positives = 53/60 (88%), Gaps = 1/60 (1%) Query 2 TRERILIKIAATWEGIQAAKQLKEEN-INCNITLLFSLCQAIAASDAGAYLVSPFVGRIL 60 +++RILIK+++TWEGIQA K+L+E++ I+CN+TLLFS QA+A ++AG L+SPFVGRIL Sbjct 135 SKDRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTLISPFVGRIL 194 > 7291684 Length=320 Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 37/59 (62%), Positives = 51/59 (86%), Gaps = 1/59 (1%) Query 3 RERILIKIAATWEGIQAAKQLKEEN-INCNITLLFSLCQAIAASDAGAYLVSPFVGRIL 60 +ERILIK+A+TWEGI+AA+ L+ E+ ++CN+TLLFS QA+A ++AG L+SPFVGRIL Sbjct 125 KERILIKLASTWEGIKAAEILENEHGVHCNLTLLFSFAQAVACAEAGVTLISPFVGRIL 183 > YGR043c Length=333 Score = 80.1 bits (196), Expect = 1e-15, Method: Composition-based stats. Identities = 36/59 (61%), Positives = 50/59 (84%), Gaps = 1/59 (1%) Query 3 RERILIKIAATWEGIQAAKQLK-EENINCNITLLFSLCQAIAASDAGAYLVSPFVGRIL 60 +ER+LIKIA+TWEGIQAA++L+ + I+CN+TLLFS QA+A ++A L+SPFVGRI+ Sbjct 138 KERVLIKIASTWEGIQAARELEVKHGIHCNMTLLFSFTQAVACAEANVTLISPFVGRIM 196 > CE28974 Length=319 Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 34/60 (56%), Positives = 52/60 (86%), Gaps = 1/60 (1%) Query 2 TRERILIKIAATWEGIQAAKQLKEEN-INCNITLLFSLCQAIAASDAGAYLVSPFVGRIL 60 +++RILIK+A+TWEGI+AAK L+ ++ I+CN+TLLF+ QA+A +++G L+SPFVGRI+ Sbjct 124 SKDRILIKLASTWEGIRAAKFLESKHGIHCNMTLLFNFEQAVACAESGVTLISPFVGRIM 183 > At1g12230 Length=377 Score = 46.2 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 0/56 (0%) Query 4 ERILIKIAATWEGIQAAKQLKEENINCNITLLFSLCQAIAASDAGAYLVSPFVGRI 59 +R+L KI ATW+GI+AA+ L+ E I ++T ++S QA AAS AGA ++ FVGR+ Sbjct 168 DRLLFKIPATWQGIEAARLLESEGIQTHMTFVYSFAQAAAASQAGASVIQIFVGRL 223 > At5g13420 Length=438 Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 0/45 (0%) Query 3 RERILIKIAATWEGIQAAKQLKEENINCNITLLFSLCQAIAASDA 47 R + IKI AT I + + + I+ N+TL+FS+ + A DA Sbjct 203 RRNVYIKIPATAPCIPSIRDVIAAGISVNVTLIFSIARYEAVIDA 247 > 7300898 Length=1638 Score = 29.3 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 7/56 (12%) Query 7 LIKIAATWEGIQAAKQLKEENINCNI----TLLFSLCQ---AIAASDAGAYLVSPF 55 L+K+A TWE +++ + E N+ + LL ++CQ A+ +D G P Sbjct 856 LMKVACTWEDVKSLRSDMERNLTSAVHFRTKLLSAVCQMQSALGITDLGQLYYKPL 911 > CE26739 Length=502 Score = 28.1 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 0/47 (0%) Query 10 IAATWEGIQAAKQLKEENINCNITLLFSLCQAIAASDAGAYLVSPFV 56 + A GI +A ++E NC +T++ SD A L+ PF+ Sbjct 7 LGAGINGIASALAIQERLPNCEVTIIAEKFSPNTTSDVAAGLIEPFL 53 Lambda K H 0.322 0.135 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1181901402 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40