bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eace_3076_orf1 Length=111 Score E Sequences producing significant alignments: (Bits) Value At5g65750 55.5 3e-08 At3g55410 52.4 2e-07 SPBC3H7.03c 39.3 0.002 YIL125w 35.8 0.018 CE28486 33.9 0.082 Hs4505493 32.7 0.16 Hs20541592 32.7 0.17 7302023 32.7 0.17 CE19856 31.6 0.35 CE25704 30.0 1.1 Hs8922716 29.3 1.8 7294032 29.3 2.1 7292108 26.9 8.7 > At5g65750 Length=1025 Score = 55.5 bits (132), Expect = 3e-08, Method: Composition-based stats. Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 9/81 (11%) Query 31 SSQSVHDTSRLIQMVRGYQMIGHELAAINPLSLPRKPPYCSLRAAQQPLQLGPEHYGFTA 90 S Q++ ++ RL+ +VR YQ+ GH A ++PL L ++ + P L P YGFT Sbjct 114 SGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEKR---------EIPEDLTPGLYGFTE 164 Query 91 ADFDKVYVARVPGMQGFLSPD 111 AD D+ + V M GFLS + Sbjct 165 ADLDREFFLGVWRMSGFLSEN 185 > At3g55410 Length=1009 Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 9/81 (11%) Query 31 SSQSVHDTSRLIQMVRGYQMIGHELAAINPLSLPRKPPYCSLRAAQQPLQLGPEHYGFTA 90 S Q++ ++ RL+ +VR YQ+ GH A ++PL L ++ + P L YGFT Sbjct 111 SGQTIQESMRLLLLVRAYQVNGHMKAKLDPLGLEQR---------EIPEDLDLALYGFTE 161 Query 91 ADFDKVYVARVPGMQGFLSPD 111 AD D+ + V M GF+S + Sbjct 162 ADLDREFFLGVWQMSGFMSEN 182 > SPBC3H7.03c Length=1009 Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 8/52 (15%) Query 44 MVRGYQMIGHELAAINPLSLPRKPPYCSLRAAQQPLQLGPEHYGFTAADFDK 95 +VR YQ GH LA ++PL + +P +L EHYGFT +D ++ Sbjct 131 LVRAYQSRGHHLAKLDPLGINVN--------HNRPSELTLEHYGFTESDLNR 174 > YIL125w Length=1014 Score = 35.8 bits (81), Expect = 0.018, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 14/91 (15%) Query 5 PAATTAGTTGAAAAGSGEGLYSAYEGSSQSVHDTSRLIQMVRGYQMIGHELAAINPLSLP 64 P T A G A GS + + S+H +L + R YQ+ GH A I+PL + Sbjct 99 PQGTEAAPLGTAMTGSVD--------ENVSIHLKVQL--LCRAYQVRGHLKAHIDPLGI- 147 Query 65 RKPPYCSLRAAQQPLQLGPEHYGFTAADFDK 95 + S + P +L ++YGF+ D DK Sbjct 148 ---SFGSNKNNPVPPELTLDYYGFSKHDLDK 175 > CE28486 Length=1029 Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 11/96 (11%) Query 3 ASPAATTAGTTGAAAAGSGEGLYSAYEGSSQSVHDTSRLIQMVRGYQMIGHELAAINPLS 62 SPAA T+ A A S QS+ D ++ ++R YQ GH +A ++PL Sbjct 109 VSPAAAQVTTSSAPATRLDTN------ASVQSISDHLKIQLLIRSYQTRGHNIADLDPLG 162 Query 63 LPRKPPYCSLRAAQQPLQLGPEHYGFTAADFDKVYV 98 + ++ P +L YG D D+ ++ Sbjct 163 INSADLDDTI-----PPELELSFYGLGERDLDREFL 193 > Hs4505493 Length=1002 Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query 16 AAAGSGEGLYSAYEGSSQSVHDTSRLIQMVRGYQMIGHELAAINPLSLPRKPPYCSLRA- 74 AA + L A + V D + ++R YQ+ GH +A ++PL + S+ A Sbjct 105 AAVAHAQSLVEAQPNVDKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSSVPAD 164 Query 75 -AQQPLQLGPEHYGFTAADFDKVY 97 +LG YG +D DKV+ Sbjct 165 IISSTDKLG--FYGLDESDLDKVF 186 > Hs20541592 Length=1023 Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 4/84 (4%) Query 16 AAAGSGEGLYSAYEGSSQSVHDTSRLIQMVRGYQMIGHELAAINPLSLPRKPPYCSLRA- 74 AA + L A + V D + ++R YQ+ GH +A ++PL + S+ A Sbjct 105 AAVAHAQSLVEAQPNVDKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSSVPAD 164 Query 75 -AQQPLQLGPEHYGFTAADFDKVY 97 +LG YG +D DKV+ Sbjct 165 IISSTDKLG--FYGLDESDLDKVF 186 > 7302023 Length=901 Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 10/69 (14%) Query 25 YSAYEGSSQSVHDTSRLIQMVRGYQMIGHELAAINPLSLPRKPPYCSLRAAQQPLQ-LGP 83 + E S + + + + V ++ GH+LAA+NP+ S+R +QQ LQ L P Sbjct 40 FQVAEDVRASRNSQANVYRFVEAFRQHGHKLAAVNPI---------SIRTSQQELQELSP 90 Query 84 EHYGFTAAD 92 YG + Sbjct 91 AFYGLQTQE 99 > CE19856 Length=933 Score = 31.6 bits (70), Expect = 0.35, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 20/116 (17%) Query 6 AATTAGTTGAAAAGSGEGLYSAYEGSSQSVHDTSRLIQMVRGYQMIGHELAAINPLSLP- 64 A G G+ G +S ++GS S SR V G+Q G + I +P Sbjct 523 GARVPGIQGSRFPGIQGARFSGFQGSRDSEFQGSR----VPGFQ--GARVPGIQGFRVPG 576 Query 65 ----RKPPYCSLRA--AQQPLQLGPEHYG-------FTAADFDKVYVARVPGMQGF 107 R P + R ++ P GP G F +V V+RVPG QGF Sbjct 577 FQGSRVPGFQGFRVQVSRVPGFQGPGFQGSRVSGSRFPGFQGFRVQVSRVPGFQGF 632 > CE25704 Length=1154 Score = 30.0 bits (66), Expect = 1.1, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query 31 SSQSVHDTSRLIQMVRGYQMIGHELAAINPLSLPRKPPYCSLRAAQQPLQLGP 83 SS ++ D RLI +G + + I PL LP PYC L + L L P Sbjct 997 SSMALKDWFRLI--AKGSSDLMKTVEWITPLGLPVVQPYCKLVERKGKLILAP 1047 > Hs8922716 Length=1010 Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust. Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 0/48 (0%) Query 16 AAAGSGEGLYSAYEGSSQSVHDTSRLIQMVRGYQMIGHELAAINPLSL 63 + G S+ +S+ V D + ++R YQ+ GH +A ++PL + Sbjct 92 SVVHEGRSAVSSRTKTSKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGI 139 > 7294032 Length=1001 Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust. Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 8/55 (14%) Query 9 TAGTTGAAAAGSGEGLYSAYEGSSQSVHDTSRLIQMVRGYQMIGHELAAINPLSL 63 TA G A AG+ S+++ D + ++R YQ+ GH +A ++PL + Sbjct 106 TAFNFGGAVAGAAP--------DSKTIDDHLAVQAIIRSYQIRGHNIAHLDPLEI 152 > 7292108 Length=1075 Score = 26.9 bits (58), Expect = 8.7, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 7/80 (8%) Query 37 DTSRLIQ-MVRGYQMIGHELAAINPLSL--PRKPPYCSLRAAQQPLQLGPEHYGFTAADF 93 D +IQ ++R YQ GH A ++PL + P+K ++ +H+ + D Sbjct 141 DDHHVIQAIIRAYQSRGHLAADLDPLGIVGPKKRTSVDGTQRHAAREVLRQHFSYIFNDL 200 Query 94 DKVY----VARVPGMQGFLS 109 + V+ + G Q FLS Sbjct 201 NTVFKLPSSTMIGGDQEFLS 220 Lambda K H 0.314 0.130 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1192473466 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40