bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eace_3083_orf3 Length=165 Score E Sequences producing significant alignments: (Bits) Value At5g62640 47.4 1e-05 Hs7706501 35.0 0.070 7291667 33.9 0.15 Hs22043354 32.0 0.51 CE07093 31.2 0.89 7290353 31.2 1.1 Hs20540593 30.0 2.5 Hs4557709 29.3 3.3 > At5g62640 Length=520 Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 11/140 (7%) Query 25 KAYNPSTAHRRKERDAEKKKNKAERKITREQALLKKNPVVIKEELDKLEEMARSGQTMTE 84 K NP+ A+R++ R E K+NK ER+ RE +LKK+P IK+++ KL +M+++ + + Sbjct 8 KVMNPTDAYRKQIRKREIKRNKKERQKVREVGILKKDPEQIKDQIRKL-DMSKAEGALDK 66 Query 85 GRTRRLQKLQQLWAQVVSSVEAGRRVRTADVSSVASVDPRSSSSSSTVNARCLQQRLSNG 144 R + ++L+ VV ++ + D + +++S + + QR G Sbjct 67 ARKHKKRQLEDTLKMVV------KKRKEYDEKKKE----QGEATTSVMFSHLPPQRRLTG 116 Query 145 ERVPDEDERRYYCPELCNTG 164 E ++ YY P L TG Sbjct 117 EEDLKPEDSVYYHPTLNPTG 136 > Hs7706501 Length=641 Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 0/51 (0%) Query 25 KAYNPSTAHRRKERDAEKKKNKAERKITREQALLKKNPVVIKEELDKLEEM 75 K NP+ R++ R E KKNK +R + R L K+P I +++KL+EM Sbjct 13 KFMNPTDQARKEARKRELKKNKKQRMMVRAAVLKMKDPKQIIRDMEKLDEM 63 > 7291667 Length=372 Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 13/112 (11%) Query 46 KAERKITREQALLKKNPVVIKEELDKLEEMARSGQTMT--------EGRTRRLQKLQQLW 97 ++ ++ T E + P+ + ++L+K + A G+ + E R QK+QQL Sbjct 193 ESAKQATAESLFHRVQPLSV-DQLEKQQRAATPGEDLLPPAGRDNHESRLSPFQKMQQLN 251 Query 98 AQVVSSVEAGRRVRTADVSSVASVDPRSSSSSSTVNA-RCLQQRLSNGERVP 148 Q++S ++ G+ TA +VA P SS+ + +A +CL++ L+ + P Sbjct 252 IQLLSDLKIGKSYATAQSPTVA---PSSSALMANDDAGKCLRRLLAGDKPGP 300 > Hs22043354 Length=619 Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 0/35 (0%) Query 123 PRSSSSSSTVNARCLQQRLSNGERVPDEDERRYYC 157 P + SSS++VN+ + L NGE V D R Y+C Sbjct 215 PTTVSSSASVNSCAVNPCLHNGECVADNTSRGYHC 249 > CE07093 Length=361 Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 12/73 (16%) Query 11 MFNPSKKFIGVETLKA----------YNPSTAHRRKERDAEKKKNKAERKITREQALLKK 60 M NP G++ L A YN S A R+ R KK K +K++ +Q +L+K Sbjct 109 MSNPLILMTGIDRLIACKSPVLKKTKYNHSDA--RRLRCQHKKSTKLTKKMSPKQLILRK 166 Query 61 NPVVIKEELDKLE 73 NP+ I+ LE Sbjct 167 NPISIRRYRALLE 179 > 7290353 Length=552 Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 0/51 (0%) Query 25 KAYNPSTAHRRKERDAEKKKNKAERKITREQALLKKNPVVIKEELDKLEEM 75 K NP+ R++ R E KKNK +R++ R L K+P I EE++K++EM Sbjct 13 KYMNPTDQARKEARKKELKKNKKQRQMVRAAVLKNKDPSQILEEMEKIDEM 63 > Hs20540593 Length=97 Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 7/58 (12%) Query 47 AERKITREQALLKKNPVVIKEE-----LDK--LEEMARSGQTMTEGRTRRLQKLQQLW 97 AER + R QAL + P + EE LD L + G ++GRTRR Q L+ W Sbjct 5 AERALPRLQALARPPPPISYEEELYDCLDYYYLRDFPACGAGRSKGRTRREQALRTNW 62 > Hs4557709 Length=3110 Score = 29.3 bits (64), Expect = 3.3, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 49/118 (41%), Gaps = 2/118 (1%) Query 36 KERDAEKKKNKAERKITREQALLKKNPVVIKEELDKLEEMARSGQTMTEGRTRRLQKLQQ 95 + ++ E +K AE ++ +ALLKK + E + EEM + + ++ Sbjct 1729 RRKNLETQKEIAEDELVAAEALLKKVKKLFGESRGENEEMEKDLREKLADYKNKVDDAWD 1788 Query 96 LWAQVVSSVEAGRRVRTADVSSVASVDPRSSSSSSTVNARCLQQRLSNGERVPDEDER 153 L + + R+ + ++ +++ + + S R ++ L G + DE R Sbjct 1789 LLREATDKIREANRLFAVNQKNMTALEKKKEAVES--GKRQIENTLKEGNDILDEANR 1844 Lambda K H 0.314 0.127 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2353551590 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40