bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_0073_orf2
Length=160
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_064610 heterogeneous nuclear ribonucleoprotein A3, ... 118 1e-26
bbo:BBOV_IV008980 23.m05983; ribonucleoprotein; K14411 RNA-bin... 105 8e-23
tpv:TP01_0879 hypothetical protein 103 4e-22
xla:379158 hnrnpa2, MGC132139, MGC52881; heterogeneous nuclear... 84.7 1e-16
xla:397773 hnrnpa3; heterogeneous nuclear ribonucleoprotein A3... 83.6 2e-16
xla:397764 MGC83311; nrp-1B; K14411 RNA-binding protein Musashi 83.6 2e-16
xla:399271 msi1, MGC83965, Musashi, Musashi-1, Musashi1, msi1h... 83.2 3e-16
dre:541389 msi1, fb40b12, ms1, wu:fb40b12, zgc:103751; musashi... 82.8 4e-16
xla:447602 MGC84815 protein 82.0 7e-16
mmu:100504473 MGC118040; RNA-binding protein Musashi homolog 2... 82.0 8e-16
dre:394084 msi2b, MGC174035, MGC63812, msi2, zgc:174035, zgc:6... 82.0 8e-16
xla:397772 heterogeneous nuclear ribonucleoprotein A3 homolog ... 82.0 9e-16
hsa:4440 MSI1; musashi homolog 1 (Drosophila); K14411 RNA-bind... 82.0 9e-16
ath:AT4G14300 heterogeneous nuclear ribonucleoprotein, putativ... 81.6 9e-16
mmu:53379 Hnrnpa2b1, 9130414A06Rik, Hnrpa2, Hnrpa2b1, hnrnp-A;... 81.3 1e-15
mmu:100045191 heterogeneous nuclear ribonucleoproteins A2/B1-l... 81.3 1e-15
hsa:3181 HNRNPA2B1, DKFZp779B0244, FLJ22720, HNRNPA2, HNRNPB1,... 81.3 1e-15
tgo:TGME49_110050 RNA binding protein, putative ; K14411 RNA-b... 81.3 1e-15
hsa:124540 MSI2, FLJ36569, MGC3245, MSI2H; musashi homolog 2 (... 80.9 2e-15
mmu:76626 Msi2, 1700105C15Rik, AI451722, AI563628, AW489193, M... 80.9 2e-15
xla:380082 hnrnpa2b1, MGC53135, hnrnpa2, hnrnpb1, hnrpa2, hnrp... 80.5 2e-15
dre:100002680 msi2a, MGC55422, cb746, fi47b09, msi2, wu:fb02d0... 80.5 2e-15
mmu:17690 Msi1, Msi1h, Musahi1, m-Msi-1; Musashi homolog 1(Dro... 80.1 3e-15
sce:YOL123W HRP1, NAB4, NAB5; Hrp1p; K14411 RNA-binding protei... 80.1 3e-15
ath:AT2G33410 heterogeneous nuclear ribonucleoprotein, putativ... 80.1 3e-15
dre:323529 fc01g05, wu:fc01g05; zgc:77366 79.7 3e-15
ath:AT3G07810 heterogeneous nuclear ribonucleoprotein, putativ... 79.7 3e-15
xla:397751 hnrnpa1, hnrpa1; ribonucleoprotein A1a; K12741 hete... 79.7 4e-15
cel:R10E9.1 msi-1; MuSashI (fly neural) family member (msi-1);... 79.7 4e-15
mmu:545592 Gm11847, OTTMUSG00000004599; heterogeneous nuclear ... 79.3 4e-15
hsa:220988 HNRNPA3, 2610510D13Rik, D10S102, FBRNP, HNRPA3, MGC... 79.3 4e-15
mmu:229279 Hnrnpa3, 2410013L13Rik, 2610209F03Rik, 2610510D13Ri... 79.3 5e-15
mmu:100505153 heterogeneous nuclear ribonucleoprotein A3-like 79.3 5e-15
mmu:100505318 heterogeneous nuclear ribonucleoprotein A3-like 79.0 7e-15
ath:AT1G17640 RNA recognition motif (RRM)-containing protein 79.0 7e-15
mmu:100504930 heterogeneous nuclear ribonucleoprotein A3-like 78.6 7e-15
xla:398455 hnrnpa0, MGC130809, hnrpa0; heterogeneous nuclear r... 78.2 1e-14
xla:399260 msi2, Msi2h, musashi-2, musashi2, xrp1; musashi hom... 78.2 1e-14
ath:AT5G47620 heterogeneous nuclear ribonucleoprotein, putativ... 78.2 1e-14
hsa:144983 HNRNPA1L2, MGC102957; heterogeneous nuclear ribonuc... 77.8 1e-14
cel:H28G03.1 hypothetical protein 77.4 2e-14
xla:380381 hnrnpa1, MGC52620, hnrpa1; heterogeneous nuclear ri... 77.0 2e-14
cel:F42A6.7 hrp-1; human HnRNP A1 homolog family member (hrp-1... 77.0 2e-14
dre:378453 hnrnpa1, hnrpa1; heterogeneous nuclear ribonucleopr... 76.6 3e-14
dre:100331239 RNA-binding protein 24-like 76.3 5e-14
ath:AT5G40490 RNA recognition motif (RRM)-containing protein; ... 75.9 5e-14
pfa:PFD0700c RNA binding protein, putative 75.5 6e-14
mmu:15382 Hnrnpa1, D15Ertd119e, Hdp, Hnrpa1, MGC102127, MGC102... 75.5 6e-14
mmu:70248 Dazap1, 2410042M16Rik, mPrrp; DAZ associated protein... 75.5 8e-14
hsa:3178 HNRNPA1, HNRPA1, HNRPA1L3, MGC102835, hnRNP_A1, hnRNP... 75.1 9e-14
> tgo:TGME49_064610 heterogeneous nuclear ribonucleoprotein A3,
putative ; K12741 heterogeneous nuclear ribonucleoprotein
A1/A3
Length=430
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 67/88 (76%), Gaps = 0/88 (0%)
Query 35 EEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIET 94
++E RK+FVGGL+R+TT DSLR YF +G V +EVLFDK TGRSRGFGF+TF +
Sbjct 117 DKELQMRKLFVGGLSRSTTTDSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPDP 176
Query 95 INNVVDRHHTIDDSQVEVRRAIPREEAR 122
+ V D HT+D +QVEVRRAIPREEAR
Sbjct 177 VARVADMRHTVDGTQVEVRRAIPREEAR 204
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query 37 ERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETIN 96
+R A ++FVGG++ + +SLR YF +G + V+ D+ R RGFGFV F + +
Sbjct 212 DRDAGRLFVGGISDDVNDESLRAYFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAE 271
Query 97 NVVDRHHTIDDSQVEVRRAIPREEAR 122
+ H + E +RA PR+ R
Sbjct 272 KAIGSHKKL-GVHCEAKRAQPRQSNR 296
> bbo:BBOV_IV008980 23.m05983; ribonucleoprotein; K14411 RNA-binding
protein Musashi
Length=306
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 66/101 (65%), Gaps = 0/101 (0%)
Query 29 PQTTMTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVT 88
P E + A KIF GGLNR+TTA++LR YFS +G V H+E++ DK TGRSRGFGFVT
Sbjct 20 PSKLFNESDYEAYKIFAGGLNRSTTAETLRNYFSKYGTVVHSEIVADKTTGRSRGFGFVT 79
Query 89 FEDIETINNVVDRHHTIDDSQVEVRRAIPREEARTAQPRRE 129
F + + V+ H ID+ +V++AI +E AR P RE
Sbjct 80 FSNDAALKAVLAVSHKIDNVLADVKQAIKKERARDLLPTRE 120
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query 42 KIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVDR 101
+IFVGG+ N + D + YF +G V + + DK T + RGFGFV +ED ++ +
Sbjct 124 RIFVGGIADNISEDEFKDYFGKYGSVLNYNFIVDKSTNKPRGFGFVVYEDPADVDKAIG- 182
Query 102 HHTIDDSQVEVRRAIPR-EEARTAQP 126
HHT E +RA PR + QP
Sbjct 183 HHTKLGRNCEAKRAQPRPSSGKNMQP 208
> tpv:TP01_0879 hypothetical protein
Length=322
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 67/94 (71%), Gaps = 0/94 (0%)
Query 33 MTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDI 92
+TE + + KIF GGL R+TT + L+ YFS FG V HTE++ DK +GRSRGFGFVTF +
Sbjct 48 LTESDYESLKIFAGGLTRSTTPEDLKAYFSKFGEVTHTEIVRDKNSGRSRGFGFVTFAER 107
Query 93 ETINNVVDRHHTIDDSQVEVRRAIPREEARTAQP 126
E++N V+ + HTID + +V+ A+ +E+A+ P
Sbjct 108 ESVNTVLRKSHTIDGVEADVKLAVRKEKAKILAP 141
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
++IFVGG++ T R YF+ +GP+ L D+ T R RG+GFV +E++E V
Sbjct 147 KRIFVGGVSEKITESYFRDYFARYGPIASYNYLVDRATNRPRGYGFVIYENMEDAEKSVG 206
Query 101 RHHTIDDSQVEVRRAIPREEARTAQPRRERR 131
H ++ + EA+ AQP+ +
Sbjct 207 LHMSLGRNC----------EAKFAQPKNSEK 227
> xla:379158 hnrnpa2, MGC132139, MGC52881; heterogeneous nuclear
ribonucleoprotein A2 homolog 2
Length=358
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNV 98
T +K+FVGG+ +T LR+YF +G + TE++ DK +G+ RGFGFVTF D + ++ +
Sbjct 98 TVKKLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKI 157
Query 99 V-DRHHTIDDSQVEVRRAIPREEARTAQPRRERRG 132
V ++HTI+ EVR+A+ ++E + Q R RG
Sbjct 158 VLQKYHTINGHNAEVRKALSKQEMQDVQNTRNNRG 192
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query 33 MTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDI 92
M E+ RK+F+GGL+ TT +SLR ++ +G + V+ D + RSRGFGFVTF +
Sbjct 1 MEREKEQFRKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCM 60
Query 93 ETINNVVD-RHHTIDDSQVEVRRAIPREEARTAQP 126
++ + R HTID VE +RA+ REE +A+P
Sbjct 61 NEVDAAMSARPHTIDGRVVEPKRAVAREE--SAKP 93
> xla:397773 hnrnpa3; heterogeneous nuclear ribonucleoprotein
A3; K12741 heterogeneous nuclear ribonucleoprotein A1/A3
Length=385
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINN- 97
T +KIFVGG+ +T LR YF +G + EV+ D+ +G+ RGF FVTF+D +T++
Sbjct 116 TVKKIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 175
Query 98 VVDRHHTIDDSQVEVRRAIPREEARTAQPRRERRGKESS 136
VV ++HTI+ EV++A+ ++E +TA +R R G S+
Sbjct 176 VVQKYHTINLHNCEVKKALSKQEMQTASAQRGRGGGGSN 214
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETIN-NVV 99
RK+F+GGL+ TT DSLR++F +G + V+ D T RSRGFGFVT+ +E ++ ++
Sbjct 27 RKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMS 86
Query 100 DRHHTIDDSQVEVRRAIPREEARTAQP 126
R H +D VE +RA+ RE+ +A+P
Sbjct 87 ARPHKVDGRVVEPKRAVSRED--SARP 111
> xla:397764 MGC83311; nrp-1B; K14411 RNA-binding protein Musashi
Length=340
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
+KIFVGGL+ NTT + ++QYF FG V ++FDK T R RGFGFVTFE + + V D
Sbjct 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKVCD 168
Query 101 RH-HTIDDSQVEVRRAIPREEARTAQPRRERRGKE 134
H H I++ VE ++A P+E P RG+
Sbjct 169 IHFHEINNKMVECKKAQPKE---VMSPTGSVRGRS 200
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query 28 QPQTTMTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFV 87
QP + + K+F+GGL+ TT + LR+YFS FG V V+ D LT RSRGFGFV
Sbjct 7 QPGLSPPDSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFV 66
Query 88 TFEDIETINNVVDRH-HTIDDSQVEVRRAIPREEARTAQPRRERRGKE 134
TF D ++ V+ + H +D ++ + A PR AQP+ R K+
Sbjct 67 TFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRR----AQPKMVTRTKK 110
> xla:399271 msi1, MGC83965, Musashi, Musashi-1, Musashi1, msi1h;
musashi homolog 1; K14411 RNA-binding protein Musashi
Length=347
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
+KIFVGGL+ NTT + ++QYF FG V ++FDK T R RGFGFVTFE + + + D
Sbjct 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKICD 168
Query 101 RH-HTIDDSQVEVRRAIPREEARTAQPRRERRGKE 134
H H I++ VE ++A P+E P RG+
Sbjct 169 IHFHEINNKMVECKKAQPKE---VMSPTGSVRGRS 200
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query 28 QPQTTMTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFV 87
QP + + K+F+GGL+ TT + LR+YFS FG V V+ D LT RSRGFGFV
Sbjct 7 QPGLSPPDSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFV 66
Query 88 TFEDIETINNVVDRH-HTIDDSQVEVRRAIPREEARTAQPRRERRGKE 134
TF D ++ V+ + H +D ++ + A PR AQP+ R K+
Sbjct 67 TFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRR----AQPKMVTRTKK 110
> dre:541389 msi1, fb40b12, ms1, wu:fb40b12, zgc:103751; musashi
homolog 1 (Drosophila); K14411 RNA-binding protein Musashi
Length=330
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
+KIFVGGL+ NTT + ++QYF FG V ++FDK T R RGFGFVTFE+ + + V +
Sbjct 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query 101 RH-HTIDDSQVEVRRAIPREEARTAQPRRERRGK 133
H H I++ VE ++A P+E P RG+
Sbjct 169 IHFHEINNKMVECKKAQPKE---VMSPTGSSRGR 199
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query 42 KIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVDR 101
K+F+GGL+ TT + L+ YF FG V + V+ D +T RSRGFGFVTF D ++ V+ +
Sbjct 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query 102 -HHTIDDSQVEVRRAIPREEARTAQPRRERRGKE 134
H +D ++ + A PR AQP+ R K+
Sbjct 81 TRHELDSKTIDPKVAFPRR----AQPKLVTRTKK 110
> xla:447602 MGC84815 protein
Length=291
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 5/149 (3%)
Query 1 EEQQQQQQQQQDEQQQQEQQQQQQAEAQPQTTMTEEERTA-RKIFVGGLNRNTTADSLRQ 59
+E + Q D + + + A P+ + E A +KIFVGGL ++ T + L +
Sbjct 62 KEASSVDKAQADRPHKVDGKDVDSKRAMPREETSPEVHAAVKKIFVGGLKKDVTNEDLAE 121
Query 60 YFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVV-DRHHTIDDSQVEVRRAIPR 118
YF FG V ++ K T SRGF FVTF+D ++++ V+ R H I + +VR+A+ R
Sbjct 122 YFGKFGNVTDASIVVAKDTNTSRGFAFVTFDDTDSVDKVILARPHMIGGHKADVRKALSR 181
Query 119 EEARTAQ--PRRERRGKESSASQ-PNITH 144
EE R Q P R SS ++ PN+ +
Sbjct 182 EELRKVQTKPPPARMDYNSSWNEGPNMGY 210
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNV-V 99
+K+FVGGLN T DSLR Y+S +G + V+ D + +SRGFGFVTF++ +++
Sbjct 13 KKLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASSVDKAQA 72
Query 100 DRHHTIDDSQVEVRRAIPREE 120
DR H +D V+ +RA+PREE
Sbjct 73 DRPHKVDGKDVDSKRAMPREE 93
> mmu:100504473 MGC118040; RNA-binding protein Musashi homolog
2-like; K14411 RNA-binding protein Musashi
Length=158
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query 23 QQAEAQPQTTMT--EEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGR 80
+A P T+ + + + K+F+GGL+ T+ DSLR YFS FG + V+ D T R
Sbjct 1 MEANGSPGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR 60
Query 81 SRGFGFVTFEDIETINNVVDR-HHTIDDSQVEVRRAIPREEARTAQPRRERRG 132
SRGFGFVTF D +++ V+ + HH +D ++ + A PR AQP+ + +G
Sbjct 61 SRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRR----AQPKSQEQG 109
> dre:394084 msi2b, MGC174035, MGC63812, msi2, zgc:174035, zgc:63812;
musashi homolog 2b (Drosophila); K14411 RNA-binding
protein Musashi
Length=408
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
+KIFVGGL+ NT + ++QYF FG V ++FDK T R RGFGFVTFE+ + + V +
Sbjct 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query 101 RH-HTIDDSQVEVRRAIPREEARTAQPRRERRG 132
H H I++ VE ++A P+E R RG
Sbjct 170 IHFHEINNKMVECKKAQPKEVMFPPGTRGRARG 202
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query 42 KIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVDR 101
K+F+GGL+ T+ DSLR YFS FG + V+ D T RSRGFGFVTF D +++ V+ +
Sbjct 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81
Query 102 -HHTIDDSQVEVRRAIPREEARTAQPRRERRGKE 134
HH +D ++ + A PR AQP+ R K+
Sbjct 82 PHHELDSKTIDPKVAFPRR----AQPKMVTRTKK 111
> xla:397772 heterogeneous nuclear ribonucleoprotein A3 homolog
1; K12741 heterogeneous nuclear ribonucleoprotein A1/A3
Length=373
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINN- 97
T +KIFVGG+ +T LR Y ++G + EV+ D+ +G+ RGF FVTF+D +T++
Sbjct 116 TVKKIFVGGIKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 175
Query 98 VVDRHHTIDDSQVEVRRAIPREEARTAQPRRERRGKESS 136
VV ++HTI+ EV++A+ ++E +TA +R R G S+
Sbjct 176 VVQKYHTINGHNCEVKKALSKQEMQTASAQRGRGGGGSN 214
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETIN-NVV 99
RK+F+GGL+ TT DSLR++F +G + V+ D T RSRGFGFVT+ +E ++ ++
Sbjct 27 RKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMS 86
Query 100 DRHHTIDDSQVEVRRAIPREEARTAQP 126
R H +D VE +RA+ RE+ +A+P
Sbjct 87 ARPHKVDGRVVEPKRAVSRED--SARP 111
> hsa:4440 MSI1; musashi homolog 1 (Drosophila); K14411 RNA-binding
protein Musashi
Length=362
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
+KIFVGGL+ NTT + ++QYF FG V ++FDK T R RGFGFVTFE + + V +
Sbjct 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query 101 RH-HTIDDSQVEVRRAIPREEARTAQPRRERRGKE 134
H H I++ VE ++A P+E P RG+
Sbjct 169 IHFHEINNKMVECKKAQPKE---VMSPTGSARGRS 200
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
Query 28 QPQTTMTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFV 87
QP + K+F+GGL+ TT + LR+YF FG V V+ D LT RSRGFGFV
Sbjct 7 QPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFV 66
Query 88 TFEDIETINNVVDRH-HTIDDSQVEVRRAIPREEARTAQPRRERRGKE 134
TF D ++ V+ + H +D ++ + A PR AQP+ R K+
Sbjct 67 TFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRR----AQPKMVTRTKK 110
> ath:AT4G14300 heterogeneous nuclear ribonucleoprotein, putative
/ hnRNP, putative; K14411 RNA-binding protein Musashi
Length=411
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%), Gaps = 0/79 (0%)
Query 42 KIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVDR 101
K+FVGG++ T D LR++F+ +G V V+ DKLTGR RGFGFV F D ++ V+
Sbjct 7 KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66
Query 102 HHTIDDSQVEVRRAIPREE 120
H+ID +V+V+RA+ REE
Sbjct 67 KHSIDTREVDVKRAMSREE 85
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
+KIFVGGL T + RQYF +GPV +++D+ T R RGFGFV+F+ + +++V+
Sbjct 110 KKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLH 169
Query 101 R-HHTIDDSQVEVRRAIPRE 119
+ H + QVEV+RA+P++
Sbjct 170 KTFHDLSGKQVEVKRALPKD 189
> mmu:53379 Hnrnpa2b1, 9130414A06Rik, Hnrpa2, Hnrpa2b1, hnrnp-A;
heterogeneous nuclear ribonucleoprotein A2/B1
Length=341
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNV 98
T +K+FVGG+ +T LR YF +G + E++ D+ +G+ RGFGFVTF+D + ++ +
Sbjct 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query 99 V-DRHHTIDDSQVEVRRAIPREEARTAQPRRERRG 132
V ++HTI+ EVR+A+ R+E + Q R RG
Sbjct 158 VLQKYHTINGHNAEVRKALSRQEMQEVQSSRSGRG 192
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query 33 MTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDI 92
M E+ RK+F+GGL+ TT +SLR Y+ +G + V+ D + RSRGFGFVTF +
Sbjct 1 MEREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM 60
Query 93 ETIN-NVVDRHHTIDDSQVEVRRAIPREEA 121
++ + R H+ID VE +RA+ REE+
Sbjct 61 AEVDAAMAARPHSIDGRVVEPKRAVAREES 90
> mmu:100045191 heterogeneous nuclear ribonucleoproteins A2/B1-like;
K13158 heterogeneous nuclear ribonucleoprotein A2/B1
Length=341
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNV 98
T +K+FVGG+ +T LR YF +G + E++ D+ +G+ RGFGFVTF+D + ++ +
Sbjct 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query 99 V-DRHHTIDDSQVEVRRAIPREEARTAQPRRERRG 132
V ++HTI+ EVR+A+ R+E + Q R RG
Sbjct 158 VLQKYHTINGHNAEVRKALSRQEMQEVQSSRSGRG 192
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query 33 MTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDI 92
M E+ RK+F+GGL+ TT +SLR Y+ +G + V+ D + RSRGFGFVTF +
Sbjct 1 MEREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM 60
Query 93 ETIN-NVVDRHHTIDDSQVEVRRAIPREEA 121
++ + R H+ID VE +RA+ REE+
Sbjct 61 AEVDAAMAARPHSIDGRVVEPKRAVAREES 90
> hsa:3181 HNRNPA2B1, DKFZp779B0244, FLJ22720, HNRNPA2, HNRNPB1,
HNRPA2, HNRPA2B1, HNRPB1, RNPA2, SNRPB1; heterogeneous nuclear
ribonucleoprotein A2/B1; K13158 heterogeneous nuclear
ribonucleoprotein A2/B1
Length=341
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNV 98
T +K+FVGG+ +T LR YF +G + E++ D+ +G+ RGFGFVTF+D + ++ +
Sbjct 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query 99 V-DRHHTIDDSQVEVRRAIPREEARTAQPRRERRG 132
V ++HTI+ EVR+A+ R+E + Q R RG
Sbjct 158 VLQKYHTINGHNAEVRKALSRQEMQEVQSSRSGRG 192
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query 33 MTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDI 92
M E+ RK+F+GGL+ TT +SLR Y+ +G + V+ D + RSRGFGFVTF +
Sbjct 1 MEREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM 60
Query 93 ETIN-NVVDRHHTIDDSQVEVRRAIPREEA 121
++ + R H+ID VE +RA+ REE+
Sbjct 61 AEVDAAMAARPHSIDGRVVEPKRAVAREES 90
> tgo:TGME49_110050 RNA binding protein, putative ; K14411 RNA-binding
protein Musashi
Length=458
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query 42 KIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVDR 101
KIFVG LN+ TT ++L Y FG V V+ DK+TG SRGFGFVTF D ++ + V
Sbjct 96 KIFVGNLNQQTTTETLSAYMKQFGAVEDVVVMVDKVTGNSRGFGFVTFADASSVTSCVGA 155
Query 102 -HHTIDDSQVEVRRAIPR 118
H ID +V+VR A+P+
Sbjct 156 EKHVIDGQEVDVRNAVPK 173
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query 42 KIFVGGLNRNTTADSLRQYFST-FGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
K+FVGG+ T + L + S FG V ++ DK TGR RGFGFVTF+ + N V
Sbjct 188 KVFVGGIPETLTEERLSAFLSERFGSVKKVSLMHDKNTGRCRGFGFVTFQFPHSAQNCVG 247
Query 101 RHHTIDDSQVEVRRAIPREEARTAQPRR--ERRGKE 134
+ H +D +EV++A PR TA+P ERRG++
Sbjct 248 K-HDVDGHVIEVKKAEPRFA--TAKPLLGDERRGED 280
> hsa:124540 MSI2, FLJ36569, MGC3245, MSI2H; musashi homolog 2
(Drosophila); K14411 RNA-binding protein Musashi
Length=328
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
+KIFVGGL+ NT + ++QYF FG V ++FDK T R RGFGFVTFE+ + + V +
Sbjct 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query 101 RH-HTIDDSQVEVRRAIPREEARTAQPRRERRG 132
H H I++ VE ++A P+E R RG
Sbjct 170 IHFHEINNKMVECKKAQPKEVMFPPGTRGRARG 202
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query 42 KIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVDR 101
K+F+GGL+ T+ DSLR YFS FG + V+ D T RSRGFGFVTF D +++ V+ +
Sbjct 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query 102 -HHTIDDSQVEVRRAIPREEARTAQPRRERRGKE 134
HH +D ++ + A PR AQP+ R K+
Sbjct 82 PHHELDSKTIDPKVAFPRR----AQPKMVTRTKK 111
> mmu:76626 Msi2, 1700105C15Rik, AI451722, AI563628, AW489193,
MGC118040, MGC130496, Msi2h; Musashi homolog 2 (Drosophila);
K14411 RNA-binding protein Musashi
Length=346
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
+KIFVGGL+ NT + ++QYF FG V ++FDK T R RGFGFVTFE+ + + V +
Sbjct 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query 101 RH-HTIDDSQVEVRRAIPREEARTAQPRRERRG 132
H H I++ VE ++A P+E R RG
Sbjct 170 IHFHEINNKMVECKKAQPKEVMFPPGTRGRARG 202
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query 23 QQAEAQPQTTMT--EEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGR 80
+A P T+ + + + K+F+GGL+ T+ DSLR YFS FG + V+ D T R
Sbjct 1 MEANGSPGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR 60
Query 81 SRGFGFVTFEDIETINNVVDR-HHTIDDSQVEVRRAIPREEARTAQPRRERRGKE 134
SRGFGFVTF D +++ V+ + HH +D ++ + A PR AQP+ R K+
Sbjct 61 SRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRR----AQPKMVTRTKK 111
> xla:380082 hnrnpa2b1, MGC53135, hnrnpa2, hnrnpb1, hnrpa2, hnrpa2b1,
hnrpb1, rnpa2, snrpb1; heterogeneous nuclear ribonucleoprotein
A2/B1; K13158 heterogeneous nuclear ribonucleoprotein
A2/B1
Length=346
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNV 98
T +K+FVGG+ +T LR+YF +G + E++ DK +G+ RGF FVTF+D + ++ +
Sbjct 98 TVKKLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKI 157
Query 99 V-DRHHTIDDSQVEVRRAIPREEARTAQPRRERRG 132
V ++HTI+ EVR+A+ ++E + Q R RG
Sbjct 158 VLQKYHTINGHNAEVRKALSKQEMQDVQNTRNNRG 192
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query 33 MTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDI 92
M E+ RK+F+GGL+ TT +SLR Y+ +G + V+ D + RSRGFGFVTF +
Sbjct 1 MEREKEQFRKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCM 60
Query 93 ETIN-NVVDRHHTIDDSQVEVRRAIPREEARTAQP 126
++ + R HTID VE +RA+ REE +A+P
Sbjct 61 NEVDAAMATRPHTIDGRVVEPKRAVAREE--SAKP 93
> dre:100002680 msi2a, MGC55422, cb746, fi47b09, msi2, wu:fb02d08,
wu:fi32d12, wu:fi47b09; musashi homolog 2a (Drosophila);
K14411 RNA-binding protein Musashi
Length=388
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 5/104 (4%)
Query 32 TMTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFED 91
++ + + K+F+GGL+ T+ DSLR YF FG + V+ D T RSRGFGF+TF D
Sbjct 12 SLNDSQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFAD 71
Query 92 IETINNVVDR-HHTIDDSQVEVRRAIPREEARTAQPRRERRGKE 134
+ +++ V+ + HH +D ++ + A PR AQP+ R K+
Sbjct 72 VSSVDKVLAQPHHELDSKTIDPKVAFPRR----AQPKMVTRTKK 111
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
+KIFVGGL+ +T + ++QYF FG V ++FDK T R RGFGFVTFE+ + + V +
Sbjct 110 KKIFVGGLSASTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEKVCE 169
Query 101 RH-HTIDDSQVEVRRAIPRE 119
H H I++ VE ++A P+E
Sbjct 170 IHFHEINNKMVECKKAQPKE 189
> mmu:17690 Msi1, Msi1h, Musahi1, m-Msi-1; Musashi homolog 1(Drosophila);
K14411 RNA-binding protein Musashi
Length=362
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
+KIFVGGL+ NTT + ++ YF FG V ++FDK T R RGFGFVTFE + + V +
Sbjct 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query 101 RH-HTIDDSQVEVRRAIPREEARTAQPRRERRGKE 134
H H I++ VE ++A P+E P RG+
Sbjct 169 IHFHEINNKMVECKKAQPKE---VMSPTGSARGRS 200
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
Query 28 QPQTTMTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFV 87
QP + K+F+GGL+ TT + LR+YF FG V V+ D LT RSRGFGFV
Sbjct 7 QPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFV 66
Query 88 TFEDIETINNVVDRH-HTIDDSQVEVRRAIPREEARTAQPRRERRGKE 134
TF D ++ V+ + H +D ++ + A PR AQP+ R K+
Sbjct 67 TFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRR----AQPKMVTRTKK 110
> sce:YOL123W HRP1, NAB4, NAB5; Hrp1p; K14411 RNA-binding protein
Musashi
Length=534
Score = 80.1 bits (196), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 73/119 (61%), Gaps = 0/119 (0%)
Query 2 EQQQQQQQQQDEQQQQEQQQQQQAEAQPQTTMTEEERTARKIFVGGLNRNTTADSLRQYF 61
EQ QQ Q + Q QQQ + + + + + + + K+F+GGLN +TT D+LR+YF
Sbjct 120 EQLQQTMSQFQQPSSQSPPQQQVTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYF 179
Query 62 STFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVDRHHTIDDSQVEVRRAIPREE 120
+G V +++ D TGRSRGFGF++FE +++ VV H +D ++ +RAIPR+E
Sbjct 180 GKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQHILDGKVIDPKRAIPRDE 238
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query 35 EEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIET 94
+E+ KIFVGG+ + ++FS +G + +++ DK TG+SRGFGFVT++ +
Sbjct 237 DEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADA 296
Query 95 INNVV-DRHHTIDDSQVEVRRAIPR 118
++ V ++ D ++E++RA PR
Sbjct 297 VDRVCQNKFIDFKDRKIEIKRAEPR 321
> ath:AT2G33410 heterogeneous nuclear ribonucleoprotein, putative
/ hnRNP, putative; K14411 RNA-binding protein Musashi
Length=404
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query 42 KIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVV-D 100
K+F+GG++ +T + LR+YFS FG V V+ +K TGR RGFGFV F D I+ V+ D
Sbjct 7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQD 66
Query 101 RHHTIDDSQVEVRRAIPREE 120
+HH ID+ V+V+RA+ REE
Sbjct 67 KHH-IDNRDVDVKRAMSREE 85
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
+KIFVGGL T+D R YF T+GPV ++ D+ T R RGFGFV+F+ ++++ V+
Sbjct 110 KKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLH 169
Query 101 R-HHTIDDSQVEVRRAIPRE 119
+ H ++ QVEV+RA+P++
Sbjct 170 KTFHDLNGKQVEVKRALPKD 189
> dre:323529 fc01g05, wu:fc01g05; zgc:77366
Length=305
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query 23 QQAEAQPQTTMTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSR 82
++A A+ E +KIF+GGL + D LR FS FG V EV+ DK TG+ R
Sbjct 83 KRAVAREDAGKPEALAKVKKIFIGGLKDDIEEDHLRDCFSQFGAVEKAEVITDKETGKKR 142
Query 83 GFGFVTFEDIETINN-VVDRHHTIDDSQVEVRRAIPREEARTA 124
GFGFV FED ++ + VV + H I+ +VEV++A+ ++E + A
Sbjct 143 GFGFVYFEDNDSADKAVVLKFHMINGHKVEVKKALTKQEMQAA 185
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query 42 KIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD- 100
K+FVGGLN TT D LR +F +G + V+ ++ RSR FGFVT+ + ++ +
Sbjct 11 KLFVGGLNVQTTDDGLRNHFEQYGKLTDCVVVQNQQLKRSRCFGFVTYSSPDEADSAMSA 70
Query 101 RHHTIDDSQVEVRRAIPREEA 121
R H +D + VE++RA+ RE+A
Sbjct 71 RPHILDGNNVELKRAVAREDA 91
> ath:AT3G07810 heterogeneous nuclear ribonucleoprotein, putative
/ hnRNP, putative; K14411 RNA-binding protein Musashi
Length=494
Score = 79.7 bits (195), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 0/79 (0%)
Query 42 KIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVDR 101
K+F+GG++ +T + L++YFS+FG V +L D+ TGR+RGFGFV F D V+
Sbjct 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query 102 HHTIDDSQVEVRRAIPREE 120
H ID VE ++A+PR++
Sbjct 67 KHNIDGRLVEAKKAVPRDD 85
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
RKIFVGGL + T + YF FG V++D T R RGFGF+T++ E + V+
Sbjct 108 RKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLL 167
Query 101 R-HHTIDDSQVEVRRAIPRE 119
+ H ++ VEV+RA+P+E
Sbjct 168 KTFHELNGKMVEVKRAVPKE 187
> xla:397751 hnrnpa1, hnrpa1; ribonucleoprotein A1a; K12741 heterogeneous
nuclear ribonucleoprotein A1/A3
Length=365
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINN- 97
T +KIFVGG+ +T D LR+YF +G + E++ D+ +G+ RGF FVTFED ++++
Sbjct 103 TVKKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKI 162
Query 98 VVDRHHTIDDSQVEVRRAIPREE 120
V+ ++HT+++ EVR+A+ ++E
Sbjct 163 VIQKYHTVNNHNCEVRKALSKQE 185
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
RK+F+GGL+ TT +SLR++F +G + V+ D + RSRGFGFVT+ + ++ +
Sbjct 14 RKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMT 73
Query 101 -RHHTIDDSQVEVRRAIPREEA 121
R H +D VE +RA+ RE++
Sbjct 74 ARPHKVDGRVVEPKRAVSREDS 95
> cel:R10E9.1 msi-1; MuSashI (fly neural) family member (msi-1);
K14411 RNA-binding protein Musashi
Length=320
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query 27 AQPQTTMTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGF 86
A P+ T + +K+F+GGL+ +T + ++QYF T+G V ++FDK T R RGFGF
Sbjct 120 AFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGF 179
Query 87 VTFEDIETINNVVDRH-HTIDDSQVEVRRAIPREEARTAQPRRER 130
VTF+ E + V + H H I+ VE ++A P+E Q + R
Sbjct 180 VTFDSDEVADKVCEIHFHEINGKMVECKKAQPKEVMLPVQLNKSR 224
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query 42 KIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVV-D 100
K+F+GGL+ TTA++LR YF FG V+ V+ D T R+RGFGF+TF D +++ V+ +
Sbjct 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query 101 RHHTIDDSQVEVRRAIPR 118
R H +D +++ + A P+
Sbjct 106 REHELDGKKIDPKVAFPK 123
> mmu:545592 Gm11847, OTTMUSG00000004599; heterogeneous nuclear
ribonucleoprotein A3 pseudogene; K12741 heterogeneous nuclear
ribonucleoprotein A1/A3
Length=362
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINN- 97
T +KIFVGG+ +T +LR YF +G + EV+ D+ +G+ RGF FVTF+D +T++
Sbjct 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query 98 VVDRHHTIDDSQVEVRRAIPREEARTA 124
VV ++HTI+ EV++A+ ++E ++A
Sbjct 184 VVQKYHTINGHNCEVKKALSKQEMQSA 210
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETIN-NVV 99
RK+F+GGL+ TT DSLR++F +G + V+ D T RSRGFGFVT+ +E ++ +
Sbjct 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query 100 DRHHTIDDSQVEVRRAIPREEA 121
R H +D VE +RA+ RE++
Sbjct 95 ARPHKVDGRVVEPKRAVSREDS 116
> hsa:220988 HNRNPA3, 2610510D13Rik, D10S102, FBRNP, HNRPA3, MGC138232,
MGC142030; heterogeneous nuclear ribonucleoprotein
A3; K12741 heterogeneous nuclear ribonucleoprotein A1/A3
Length=378
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINN- 97
T +KIFVGG+ +T +LR YF +G + EV+ D+ +G+ RGF FVTF+D +T++
Sbjct 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query 98 VVDRHHTIDDSQVEVRRAIPREEARTA 124
VV ++HTI+ EV++A+ ++E ++A
Sbjct 184 VVQKYHTINGHNCEVKKALSKQEMQSA 210
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETIN-NVV 99
RK+F+GGL+ TT DSLR++F +G + V+ D T RSRGFGFVT+ +E ++ +
Sbjct 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query 100 DRHHTIDDSQVEVRRAIPREEA 121
R H +D VE +RA+ RE++
Sbjct 95 ARPHKVDGRVVEPKRAVSREDS 116
> mmu:229279 Hnrnpa3, 2410013L13Rik, 2610209F03Rik, 2610510D13Rik,
Hnrpa3, MGC101940, MGC37309; heterogeneous nuclear ribonucleoprotein
A3; K12741 heterogeneous nuclear ribonucleoprotein
A1/A3
Length=357
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINN- 97
T +KIFVGG+ +T +LR YF +G + EV+ D+ +G+ RGF FVTF+D +T++
Sbjct 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query 98 VVDRHHTIDDSQVEVRRAIPREEARTA 124
VV ++HTI+ EV++A+ ++E ++A
Sbjct 162 VVQKYHTINGHNCEVKKALSKQEMQSA 188
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETIN-NVV 99
RK+F+GGL+ TT DSLR++F +G + V+ D T RSRGFGFVT+ +E ++ +
Sbjct 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query 100 DRHHTIDDSQVEVRRAIPREEA 121
R H +D VE +RA+ RE++
Sbjct 73 ARPHKVDGRVVEPKRAVSREDS 94
> mmu:100505153 heterogeneous nuclear ribonucleoprotein A3-like
Length=350
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINN- 97
T +KIFVGG+ +T +LR YF +G + EV+ D+ +G+ RGF FVTF+D +T++
Sbjct 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query 98 VVDRHHTIDDSQVEVRRAIPREEARTA 124
VV ++HTI+ EV++A+ ++E ++A
Sbjct 162 VVQKYHTINGHNCEVKKALSKQEMQSA 188
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETIN-NVV 99
RK+F+GGL+ TT DSLR++F +G + V+ D T RSRGFGFVT+ +E ++ +
Sbjct 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query 100 DRHHTIDDSQVEVRRAIPREEA 121
R H ID VE +RA+ RE++
Sbjct 73 ARPHKIDGRVVEPKRAVSREDS 94
> mmu:100505318 heterogeneous nuclear ribonucleoprotein A3-like
Length=357
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINN- 97
T +KIFVGG+ +T +LR YF +G + EV+ D+ +G+ RGF FVTF+D +T++
Sbjct 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGNIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query 98 VVDRHHTIDDSQVEVRRAIPREEARTA 124
VV ++HTI+ EV++A+ ++E ++A
Sbjct 162 VVQKYHTINGHNCEVKKALSKQEMQSA 188
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETIN-NVV 99
RK+F+GGL+ TT DSLR++F +G + V+ D T RSRGFGFVT+ +E ++ +
Sbjct 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query 100 DRHHTIDDSQVEVRRAIPREEA 121
R H +D VE +RA+ RE++
Sbjct 73 ARPHRVDGRVVEPKRAVSREDS 94
> ath:AT1G17640 RNA recognition motif (RRM)-containing protein
Length=369
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 53/82 (64%), Gaps = 0/82 (0%)
Query 42 KIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVDR 101
K+FVGG++ TTA++ YF FG V + ++ D++TG RGFGFVTF D V++
Sbjct 67 KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 126
Query 102 HHTIDDSQVEVRRAIPREEART 123
H IDD +V+++R +PR + T
Sbjct 127 DHVIDDRKVDLKRTLPRGDKDT 148
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
RKIFVGGL D L+ YF +G + ++++D TGRSRGFGFVTF+ ++++ +
Sbjct 157 RKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFS 216
Query 101 --RHHTIDDSQVEVRRAIPREEAR 122
+ H + D QVE++RA P+ R
Sbjct 217 DGKVHELGDKQVEIKRAEPKRTGR 240
> mmu:100504930 heterogeneous nuclear ribonucleoprotein A3-like
Length=209
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINN- 97
T +KIFVGG+ +T +LR YF +G + EV+ D+ +G+ RGF FVTF+D +T++
Sbjct 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query 98 VVDRHHTIDDSQVEVRRAIPREEARTA 124
VV ++HTI+ EV++A+ ++E ++A
Sbjct 162 VVQKYHTINGHNCEVKKALSKQEMQSA 188
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETIN-NVV 99
RK+F+GGL+ TT DSLR++F +G + V+ D T RSRGFGFVT+ +E ++ +
Sbjct 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query 100 DRHHTIDDSQVEVRRAIPREEA 121
R H +D VE +RA+ RE++
Sbjct 73 ARPHKVDGRVVEPKRAVSREDS 94
> xla:398455 hnrnpa0, MGC130809, hnrpa0; heterogeneous nuclear
ribonucleoprotein A0; K12894 heterogeneous nuclear ribonucleoprotein
A0
Length=308
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query 40 ARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINN-V 98
+K+FVGGL L ++FS FGPV EV+ DKLTG+ RGFGFV F ++ +
Sbjct 102 VKKLFVGGLKEEVGESDLLEHFSQFGPVEKVEVIADKLTGKKRGFGFVYFNSHDSADKAA 161
Query 99 VDRHHTIDDSQVEVRRAIPREE 120
V + H+++ +VEV++A+P+EE
Sbjct 162 VVKFHSVNGHRVEVKKAVPKEE 183
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query 42 KIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVDR 101
K+F+GGLN TT + LRQ+F T+G + V+ + T RSR FGFVT+ + V+
Sbjct 13 KLFIGGLNVQTTEEGLRQHFETYGQLTDCVVVINPQTKRSRCFGFVTYSSAAEADAAVEA 72
Query 102 H-HTIDDSQVEVRRAIPREEARTAQP 126
H +D + VE++RA+ RE+ +A+P
Sbjct 73 SPHVVDGNNVELKRAVSRED--SARP 96
> xla:399260 msi2, Msi2h, musashi-2, musashi2, xrp1; musashi homolog
2; K14411 RNA-binding protein Musashi
Length=406
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
+KIFVGGL+ NT + ++QYF +G V ++FDK T R RGFGFVTFE + + V +
Sbjct 110 KKIFVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCE 169
Query 101 RH-HTIDDSQVEVRRAIPREEARTAQPRRERRG 132
H H I++ VE ++A P+E R RG
Sbjct 170 IHFHEINNKMVECKKAQPKEVMFPPGTRGRARG 202
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query 42 KIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVDR 101
K+F+GGL+ T+ DSLR YF+ FG + V+ D T RSRGFGFVTF D +++ V+ +
Sbjct 22 KMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 81
Query 102 -HHTIDDSQVEVRRAIPREEARTAQPRRERRGKE 134
HH +D ++ + A PR AQP+ R K+
Sbjct 82 PHHELDSKTIDPKVAFPRR----AQPKMVTRTKK 111
> ath:AT5G47620 heterogeneous nuclear ribonucleoprotein, putative
/ hnRNP, putative; K14411 RNA-binding protein Musashi
Length=431
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 0/79 (0%)
Query 42 KIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVDR 101
K+F+GG++ T+ D LR YF +FG V ++ D+ TGR+RGFGFV F D VV
Sbjct 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query 102 HHTIDDSQVEVRRAIPREE 120
H ID VE ++A+PR++
Sbjct 67 KHIIDGKIVEAKKAVPRDD 85
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query 40 ARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVV 99
++KIFVGGL + T ++YF+ FG + V++D T R RGFGF++++ E ++ V+
Sbjct 105 SKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVL 164
Query 100 DR-HHTIDDSQVEVRRAIPREEA 121
+ H ++ VEV+ A+P++ A
Sbjct 165 QKTFHELNGKMVEVKLAVPKDMA 187
> hsa:144983 HNRNPA1L2, MGC102957; heterogeneous nuclear ribonucleoprotein
A1-like 2; K12741 heterogeneous nuclear ribonucleoprotein
A1/A3
Length=320
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINN- 97
T +KIFVGG+ +T LR YF +G + E++ D+ +G+ RGF FVTF+D ++++
Sbjct 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query 98 VVDRHHTIDDSQVEVRRAIPREEARTA 124
V+ ++HT+ EVR+A+P++E +A
Sbjct 163 VIQKYHTVKGHNCEVRKALPKQEMASA 189
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
RK+F+GGL+ TT +SLR +F +G + V+ D T RSRGFGFVT+ +E ++ ++
Sbjct 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query 101 RH-HTIDDSQVEVRRAIPREEA 121
H +D VE +RA+ RE++
Sbjct 74 TTPHKVDGRVVEPKRAVSREDS 95
> cel:H28G03.1 hypothetical protein
Length=336
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 63/114 (55%), Gaps = 10/114 (8%)
Query 14 QQQQEQQQQQQAEAQPQTTMTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVL 73
Q QQ Q Q ++ PQ RK+F+GGL+ +TT + L YFS +GPV V+
Sbjct 52 QFQQMGMGQYQHDSPPQL---------RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVI 102
Query 74 FDKLTGRSRGFGFVTFEDIETINNVV-DRHHTIDDSQVEVRRAIPREEARTAQP 126
D T SRGFGFVTF I + + + DR H + V+ +RAIPRE+ + P
Sbjct 103 RDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIP 156
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query 22 QQQAEAQPQTTMTEEERTARKIFVGGLNRNT-TADSLRQYFSTFGPVHHTEVLFDKLTGR 80
+Q + P + K+ + G+ + DSLR YF TFG + E+L G+
Sbjct 149 EQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEIL-----GQ 203
Query 81 SRGFGFVTFEDIETINNVVDRH---HTIDDSQVEVR 113
RG GFV +ED E+ + + + H +++ ++EVR
Sbjct 204 PRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVR 239
> xla:380381 hnrnpa1, MGC52620, hnrpa1; heterogeneous nuclear
ribonucleoprotein A1; K12741 heterogeneous nuclear ribonucleoprotein
A1/A3
Length=399
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINN- 97
T +KIFVGG+ +T LR+YF +G + E++ D+ +G+ RGF FVTFED ++++
Sbjct 103 TVKKIFVGGIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKI 162
Query 98 VVDRHHTIDDSQVEVRRAIPREEARTA 124
V+ ++HT+++ EVR+A+ ++E +
Sbjct 163 VIQKYHTVNNHNCEVRKALSKQEMSSV 189
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
RK+F+GGL+ TT +SLR++F +G + V+ D + RSRGFGFVT+ + ++ +
Sbjct 14 RKLFIGGLSFETTDESLREHFEQWGALTDCVVMRDPNSKRSRGFGFVTYSSTDEVDAAMT 73
Query 101 -RHHTIDDSQVEVRRAIPREEA 121
R H +D VE +RA+ RE++
Sbjct 74 ARPHKVDGRVVEPKRAVSREDS 95
> cel:F42A6.7 hrp-1; human HnRNP A1 homolog family member (hrp-1);
K12741 heterogeneous nuclear ribonucleoprotein A1/A3
Length=346
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query 36 EERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETI 95
E RKIFVGGL NTT D +R+++S FG + V+ D T RSRGFGFVTF +
Sbjct 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query 96 NNVVD-RHHTIDDSQVEVRRAIPREE 120
+ + R H ID V+ +RA+PR++
Sbjct 78 DAAMKQRPHIIDGKTVDPKRAVPRDD 103
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Query 34 TEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIE 93
+E + ++++V G+ + T D L +YF+ +G V +E++ DK T + RGFGFVTF+D +
Sbjct 107 SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHD 166
Query 94 TIN-NVVDRHHTIDDSQVEVRRAIPREEARTAQPRRER--RGKES 135
+++ V+ + H ++ + +VR+ + ++E AQ R+R RG S
Sbjct 167 SVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRETRGGRS 211
> dre:378453 hnrnpa1, hnrpa1; heterogeneous nuclear ribonucleoprotein
A1; K12741 heterogeneous nuclear ribonucleoprotein A1/A3
Length=422
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINN- 97
T +KIFVGG+ +T + LR YF FG + E++ D TG RGF FVTF+D ++++
Sbjct 122 TVKKIFVGGIKDDTEENHLRDYFDQFGKIEVVEIMVDHKTGNKRGFAFVTFDDHDSVDRI 181
Query 98 VVDRHHTIDDSQVEVRRAIPREE 120
V+ ++HT++ EVR+A+ ++E
Sbjct 182 VIQKYHTVNGHNCEVRKALSKQE 204
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Query 26 EAQPQTTMTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFG 85
E QP+ E RK+F+GGL+ TT DSLR +F +G + V+ D T RSRGFG
Sbjct 23 EGQPR-----EPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFG 77
Query 86 FVTFEDIETINNVVD-RHHTIDDSQVEVRRAIPREEA 121
FVT+ ++ +N +D R H +D VE +RA+ RE++
Sbjct 78 FVTYSSVDEVNASMDARPHKVDGRLVEPKRAVSREDS 114
> dre:100331239 RNA-binding protein 24-like
Length=234
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query 34 TEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIE 93
T+++ T KIFVGGL +TT SLR+YF FG + V+ D+ TG+SRG+GFVT D
Sbjct 4 TQKDTTYTKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRS 63
Query 94 TINNVV-DRHHTIDDSQVEVRRAIPREEARTAQPRRERRGKESSASQPNITHAHVWCWRV 152
+ D + ID + V A + R QP E + + W
Sbjct 64 AADRACKDPNPIIDGRKANVNLAYLGAKPRVMQPGYEF----------GVNNMKAWIHPA 113
Query 153 SYERPLQI 160
Y+RP +I
Sbjct 114 LYQRPFEI 121
> ath:AT5G40490 RNA recognition motif (RRM)-containing protein;
K12741 heterogeneous nuclear ribonucleoprotein A1/A3
Length=423
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 0/80 (0%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNV 98
+A KIFVGGL R TT+ ++F +G + + ++ D+ TG+ RGFGFVT+ D ++ V
Sbjct 40 SAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKV 99
Query 99 VDRHHTIDDSQVEVRRAIPR 118
+ +H I QVE++R IPR
Sbjct 100 IQDNHIIIGKQVEIKRTIPR 119
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Query 29 PQTTMTEEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVT 88
P+ +M+ + +KIFVGG+ + D +++F FG + +++ D TGRSRGFGFVT
Sbjct 118 PRGSMSSNDFKTKKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVT 177
Query 89 FEDIETINNVVDRHHTIDDS--QVEVRRAIPREEARTAQPRR 128
+E + +++++ + + I+ S QVE+++A P++ P +
Sbjct 178 YESEDMVDHLLAKGNRIELSGTQVEIKKAEPKKPNSVTTPSK 219
> pfa:PFD0700c RNA binding protein, putative
Length=358
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
RKIFVGGLN T D+L YFSTFG + +++ D +GRSR FGFV F + ++ V+
Sbjct 198 RKIFVGGLNYYWTKDTLESYFSTFGEIDVVQIVLDS-SGRSRCFGFVVFSNENSVAKVLK 256
Query 101 -RHHTIDDSQVEVRRAIPRE 119
+ H I D VEVR+A P++
Sbjct 257 HKRHKIYDKMVEVRKAEPKK 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 0/72 (0%)
Query 42 KIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVDR 101
K F+GG+ + T+ + +YF +G V H + D T R+RGF FVT ++
Sbjct 115 KFFIGGIPQYITSKHITEYFEQYGTVQHVVIAQDHETKRNRGFAFVTMASHINKERILRD 174
Query 102 HHTIDDSQVEVR 113
H ++ +V+VR
Sbjct 175 THELNGKRVDVR 186
> mmu:15382 Hnrnpa1, D15Ertd119e, Hdp, Hnrpa1, MGC102127, MGC102128,
MGC103392, hnRNP_A1, hnrnp-A1; heterogeneous nuclear
ribonucleoprotein A1; K12741 heterogeneous nuclear ribonucleoprotein
A1/A3
Length=373
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINN- 97
T +KIFVGG+ +T LR YF +G + E++ D+ +G+ RGF FVTF+D ++++
Sbjct 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query 98 VVDRHHTIDDSQVEVRRAIPREEARTA 124
V+ ++HT++ EVR+A+ ++E +A
Sbjct 163 VIQKYHTVNGHNCEVRKALSKQEMASA 189
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query 41 RKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVVD 100
RK+F+GGL+ TT +SLR +F +G + V+ D T RSRGFGFVT+ +E ++ ++
Sbjct 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query 101 -RHHTIDDSQVEVRRAIPREEA 121
R H +D VE +RA+ RE++
Sbjct 74 ARPHKVDGRVVEPKRAVSREDS 95
> mmu:70248 Dazap1, 2410042M16Rik, mPrrp; DAZ associated protein
1; K14411 RNA-binding protein Musashi
Length=406
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query 35 EEERTARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIET 94
+ + KIFVGG+ N LR+YF FG V +++D R RGFGF+TFED ++
Sbjct 107 SDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 166
Query 95 INNVVDRH-HTIDDSQVEVRRAIPREEARTA--QPRRERRGKESSASQPN 141
++ V+ H H I +VEV+RA PR+ A QP + G + S N
Sbjct 167 VDQAVNMHFHDIMGKKVEVKRAEPRDSKNQAPGQPGASQWGSRVAPSAAN 216
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 11/107 (10%)
Query 42 KIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINNVV-D 100
K+FVGGL+ +TT ++LR YFS +G V ++ DK T +SRGFGFV F+D + V+
Sbjct 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query 101 RHHTIDDSQVEVRRAIPREEARTAQPRRER------RGKESSASQPN 141
R HT+D ++ + P R QP R R +G S +S+ N
Sbjct 71 RPHTLDGRNIDPKPCTP----RGMQPERTRPKEGWQKGPRSDSSKSN 113
> hsa:3178 HNRNPA1, HNRPA1, HNRPA1L3, MGC102835, hnRNP_A1, hnRNP-A1;
heterogeneous nuclear ribonucleoprotein A1; K12741 heterogeneous
nuclear ribonucleoprotein A1/A3
Length=320
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query 39 TARKIFVGGLNRNTTADSLRQYFSTFGPVHHTEVLFDKLTGRSRGFGFVTFEDIETINN- 97
T +KIFVGG+ +T LR YF +G + E++ D+ +G+ RGF FVTF+D ++++
Sbjct 103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Query 98 VVDRHHTIDDSQVEVRRAIPREEARTA 124
V+ ++HT++ EVR+A+ ++E +A
Sbjct 163 VIQKYHTVNGHNCEVRKALSKQEMASA 189
Lambda K H
0.314 0.127 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3712313100
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40