bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_0083_orf2
Length=245
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_112280 ATP-dependent RNA helicase, putative (EC:3.4... 416 4e-116
ath:AT3G26560 ATP-dependent RNA helicase, putative; K12818 ATP... 357 3e-98
pfa:PF10_0294 RNA helicase, putative; K12818 ATP-dependent RNA... 340 2e-93
cpv:cgd6_1410 pre-mRNA splicing factor ATP-dependent RNA helic... 337 2e-92
dre:606595 im:7153552; K12818 ATP-dependent RNA helicase DHX8/... 325 1e-88
xla:444315 MGC80994 protein; K12818 ATP-dependent RNA helicase... 325 1e-88
hsa:1659 DHX8, DDX8, HRH1, PRP22, PRPF22; DEAH (Asp-Glu-Ala-Hi... 323 5e-88
mmu:217207 Dhx8, Ddx8, KIAA4096, MGC31290, mDEAH6, mKIAA4096; ... 323 5e-88
cel:EEED8.5 mog-5; Masculinisation Of Germline family member (... 275 1e-73
bbo:BBOV_I002940 19.m02117; RNA helicase; K12818 ATP-dependent... 248 1e-65
sce:YER013W PRP22; DEAH-box RNA-dependent ATPase/ATP-dependent... 241 2e-63
ath:AT1G32490 ESP3; ESP3 (ENHANCED SILENCING PHENOTYPE 3); ATP... 225 1e-58
cel:C04H5.6 mog-4; Masculinisation Of Germline family member (... 224 2e-58
ath:AT2G35340 MEE29; MEE29 (maternal effect embryo arrest 29);... 221 1e-57
dre:336645 dhx16, fa91b12, wu:fa91b12, zgc:55590; DEAH (Asp-Gl... 221 3e-57
hsa:8449 DHX16, DBP2, DDX16, PRO2014, PRP8, PRPF2, Prp2; DEAH ... 220 4e-57
mmu:64340 Dhx38, 5730550P09Rik, AI325984, AW540902, Ddx38, Prp... 220 4e-57
ath:AT4G16680 RNA helicase, putative 220 4e-57
dre:393850 dhx38, MGC63517, zgc:63517; DEAH (Asp-Glu-Ala-His) ... 219 5e-57
mmu:69192 Dhx16, 2410006N22Rik, DBP2, Ddx16, mKIAA0577; DEAH (... 219 6e-57
hsa:9785 DHX38, DDX38, KIAA0224, PRP16, PRPF16; DEAH (Asp-Glu-... 219 6e-57
tgo:TGME49_063650 pre-mRNA splicing factor RNA helicase, putat... 219 8e-57
bbo:BBOV_IV011160 23.m05966; RNA helicase (EC:3.6.1.-); K12813... 219 9e-57
tgo:TGME49_033520 ATP-dependent RNA helicase, putative (EC:3.4... 217 3e-56
ath:AT3G62310 RNA helicase, putative; K12820 pre-mRNA-splicing... 214 2e-55
cel:K03H1.2 mog-1; Masculinisation Of Germline family member (... 214 3e-55
ath:AT2G47250 RNA helicase, putative; K12820 pre-mRNA-splicing... 213 6e-55
cpv:cgd7_640 Prp16p pre-mRNA splicing factor. HrpA family SFII... 209 7e-54
tgo:TGME49_060200 ATP-dependent RNA helicase, putative (EC:3.6... 204 3e-52
ath:AT5G13010 EMB3011 (embryo defective 3011); ATP binding / R... 203 5e-52
cpv:cgd1_2650 hypothetical protein 202 9e-52
xla:414571 dhx15, MGC81281; DEAH (Asp-Glu-Ala-His) box polypep... 201 1e-51
tpv:TP03_0394 splicing factor; K12815 pre-mRNA-splicing factor... 201 2e-51
mmu:71715 Dhx35, 1200009D07Rik, Ddx35; DEAH (Asp-Glu-Ala-His) ... 200 4e-51
hsa:1665 DHX15, DBP1, DDX15, HRH2, PRP43, PRPF43, PrPp43p; DEA... 199 6e-51
mmu:13204 Dhx15, DBP1, Ddx15, HRH2, MGC117685, mDEAH9; DEAH (A... 199 8e-51
dre:321931 dhx15, im:2639158, wu:fb38f09, wu:fk62f05; DEAH (As... 198 1e-50
ath:AT1G26370 RNA helicase, putative 198 1e-50
bbo:BBOV_IV002560 21.m03072; DEAH box RNA helicase (EC:3.6.1.-... 197 2e-50
sce:YNR011C PRP2, RNA2; Prp2p (EC:3.6.1.-); K12814 pre-mRNA-sp... 196 5e-50
sce:YGL120C PRP43; Prp43p (EC:3.6.1.-); K12820 pre-mRNA-splici... 195 1e-49
dre:100037310 zgc:158828 193 4e-49
pfa:MAL13P1.322 splicing factor, putative; K12815 pre-mRNA-spl... 193 6e-49
tpv:TP01_0641 RNA helicase 192 6e-49
bbo:BBOV_I004340 19.m02126; pre-mRNA splicing factor RNA helic... 192 1e-48
cel:F56D2.6 hypothetical protein; K12820 pre-mRNA-splicing fac... 190 3e-48
ath:AT4G18465 RNA helicase, putative; K13117 ATP-dependent RNA... 189 7e-48
tpv:TP01_0544 RNA helicase 188 2e-47
tpv:TP01_1019 ATP-dependent RNA helicase; K12820 pre-mRNA-spli... 183 6e-46
cel:Y67D2.6 hypothetical protein; K13117 ATP-dependent RNA hel... 179 1e-44
> tgo:TGME49_112280 ATP-dependent RNA helicase, putative (EC:3.4.22.44);
K12818 ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Length=1206
Score = 416 bits (1069), Expect = 4e-116, Method: Compositional matrix adjust.
Identities = 197/233 (84%), Positives = 216/233 (92%), Gaps = 0/233 (0%)
Query 13 KERRDVRQAQEAAILDSIPKDMSRPWEDPNPQPGERTIAQALQGLGQTGYEMPEWKKLYL 72
KERR++R AQEAAILDSIPKDMSRPWEDP P PGERTIAQAL+GLGQT YEMPEWKK+Y+
Sbjct 471 KERREIRNAQEAAILDSIPKDMSRPWEDPAPGPGERTIAQALKGLGQTSYEMPEWKKMYI 530
Query 73 GKNVSFGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAE 132
GK+VSFG KS SIAEQR+SLPI++L+E LLKAI NQVLIVIGETGSGKTTQMTQY+AE
Sbjct 531 GKSVSFGQKSNKSIAEQRQSLPIYRLREPLLKAIKENQVLIVIGETGSGKTTQMTQYLAE 590
Query 133 AGLVTPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTD 192
GLV PG +IGCTQPRRVAA+SVAKRVAEEFGCR+GQEVGY+IRFEDCTS DTIIKYMTD
Sbjct 591 EGLVPPGTMIGCTQPRRVAAISVAKRVAEEFGCRVGQEVGYNIRFEDCTSPDTIIKYMTD 650
Query 193 GLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
G+LLREALVD L+RY VVMLDEAHERTISTDVLFGLLK+CCR+RPDFKLIVT
Sbjct 651 GMLLREALVDASLKRYCVVMLDEAHERTISTDVLFGLLKDCCRRRPDFKLIVT 703
> ath:AT3G26560 ATP-dependent RNA helicase, putative; K12818 ATP-dependent
RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Length=1168
Score = 357 bits (915), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 168/245 (68%), Positives = 207/245 (84%), Gaps = 1/245 (0%)
Query 1 LARAAATAQSLAKERRDVRQAQEAAILDSIPKDMSRPWEDPNPQPGERTIAQALQGLGQT 60
L+RAAA +L KERR++R+ Q+ +LDSIPKD++RPWEDP P+ GER +AQ L+G+G +
Sbjct 423 LSRAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLS 482
Query 61 GYEMPEWKKLYLGKNVSFGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGS 120
Y+MPEWKK GK +FG +S LSI EQR SLPI+KLK++L++A+ +NQVL+VIGETGS
Sbjct 483 AYDMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGS 542
Query 121 GKTTQMTQYMAEAGLVTPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDC 180
GKTTQ+TQY+AEAG T G+ IGCTQPRRVAAMSVAKRVAEEFGCRLG+EVGY+IRFEDC
Sbjct 543 GKTTQVTQYLAEAGYTTKGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 601
Query 181 TSADTIIKYMTDGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDF 240
T DT+IKYMTDG+LLRE L+D L +YSV+MLDEAHERTI TDVLFGLLK+ ++R D
Sbjct 602 TGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDL 661
Query 241 KLIVT 245
+LIVT
Sbjct 662 RLIVT 666
> pfa:PF10_0294 RNA helicase, putative; K12818 ATP-dependent RNA
helicase DHX8/PRP22 [EC:3.6.4.13]
Length=1290
Score = 340 bits (872), Expect = 2e-93, Method: Composition-based stats.
Identities = 161/245 (65%), Positives = 196/245 (80%), Gaps = 2/245 (0%)
Query 1 LARAAATAQSLAKERRDVRQAQEAAILDSIPKDMSRPWEDPNPQPGERTIAQALQGLGQT 60
LA+A T +LAKER++ +Q ++ AI D+IPKD+SRPWEDP P GERTIA+AL+ +G+
Sbjct 540 LAKAITTTSALAKERKEQKQNEQNAIYDNIPKDISRPWEDPKPNLGERTIAEALKNIGKN 599
Query 61 GYEMPEWKKLYLGKNVSFGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGS 120
Y++PEWKK Y N+S G+K+TL I EQR LPI+ LK L+KAI N VLIVIGETGS
Sbjct 600 -YDIPEWKKNYNNNNISVGVKNTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGS 658
Query 121 GKTTQMTQYMAEAGLVTPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDC 180
GKTTQ+ QY+ EA G ++GCTQPRRVAAMS+AKRV+EEFGC LGQEVGYSIRF+DC
Sbjct 659 GKTTQIPQYLHEANYTEKG-IVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDC 717
Query 181 TSADTIIKYMTDGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDF 240
TS DTIIKY+TDG+LLRE L D L +YS ++LDEAHERTISTD+LF LLK+ R+R DF
Sbjct 718 TSNDTIIKYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADF 777
Query 241 KLIVT 245
KLIVT
Sbjct 778 KLIVT 782
> cpv:cgd6_1410 pre-mRNA splicing factor ATP-dependent RNA helicase
; K12818 ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Length=1005
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 157/246 (63%), Positives = 200/246 (81%), Gaps = 1/246 (0%)
Query 1 LARAAATAQSLAKERRDVRQAQEAAILDSIPKDMSRPWEDPNPQPGERTIAQALQGLGQT 60
L +AA A ++A+ERR++R QE ++DSIP+DM+RPWEDPNP+ GERTIA AL+G+G
Sbjct 257 LNKAAELASNIARERREIRDFQEKTLIDSIPRDMNRPWEDPNPEAGERTIASALRGIGMN 316
Query 61 GYEMPEWKKLYLGKNVSFGIKS-TLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETG 119
PEWK+ YLGK++SFG K+ T SI+EQR++LPI+ +++ L+ AI NNQV++VIGETG
Sbjct 317 SQTTPEWKRQYLGKSLSFGKKNVTASISEQRKNLPIYPMRDSLVDAIRNNQVIVVIGETG 376
Query 120 SGKTTQMTQYMAEAGLVTPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFED 179
SGKTTQ+TQY+ E G G +IGCTQPRRVAA S+A+RVA+E GC LG VG++IRFED
Sbjct 377 SGKTTQITQYLYEEGFCKDGGIIGCTQPRRVAATSIARRVAQEMGCTLGSTVGFAIRFED 436
Query 180 CTSADTIIKYMTDGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPD 239
T+ +T IKYMTDG+LLREAL D L +YSV+MLDEAHERTI+TDVLFGLLKE C +RP
Sbjct 437 ITTPETKIKYMTDGMLLREALSDNCLSQYSVIMLDEAHERTITTDVLFGLLKETCIKRPK 496
Query 240 FKLIVT 245
F+LIVT
Sbjct 497 FRLIVT 502
> dre:606595 im:7153552; K12818 ATP-dependent RNA helicase DHX8/PRP22
[EC:3.6.4.13]
Length=1210
Score = 325 bits (832), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/246 (64%), Positives = 198/246 (80%), Gaps = 2/246 (0%)
Query 1 LARAAATAQSLAKERRDVRQAQEAAILDSIPKDMSRPWEDPNPQPGERTIAQALQGLGQT 60
L++AA +LAKERR+V+QAQ A +DSIP +++ W DP P R IA ++G+G
Sbjct 462 LSQAAMMQSALAKERREVKQAQREAEMDSIPMGLNKHWVDPLPDVDGRQIAANMRGIGMM 521
Query 61 GYEMPEWKKLYLGKN-VSFGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETG 119
++PEWKK G N S+G K+ LSI EQR SLPI+KLKEQL++A+ +NQ+LIVIGETG
Sbjct 522 PNDIPEWKKHAFGGNKASYGKKTQLSILEQRESLPIYKLKEQLIQAVHDNQILIVIGETG 581
Query 120 SGKTTQMTQYMAEAGLVTPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFED 179
SGKTTQ+TQY+AEAG T G+ IGCTQPRRVAAMSVAKRV+EE+GC LGQEVGY+IRFED
Sbjct 582 SGKTTQITQYLAEAGYTTRGK-IGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFED 640
Query 180 CTSADTIIKYMTDGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPD 239
CTS +T+IKYMTDG+LLRE L+DP L +Y+++MLDEAHERTI TDVLFGLLK+ ++R D
Sbjct 641 CTSPETVIKYMTDGMLLRECLIDPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTD 700
Query 240 FKLIVT 245
KLIVT
Sbjct 701 MKLIVT 706
> xla:444315 MGC80994 protein; K12818 ATP-dependent RNA helicase
DHX8/PRP22 [EC:3.6.4.13]
Length=793
Score = 325 bits (832), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 158/246 (64%), Positives = 198/246 (80%), Gaps = 2/246 (0%)
Query 1 LARAAATAQSLAKERRDVRQAQEAAILDSIPKDMSRPWEDPNPQPGERTIAQALQGLGQT 60
L++AA +LAKERR+V+QAQ A +DSIP +++ W DP P R IA ++G+G
Sbjct 428 LSQAAMMQSALAKERREVKQAQREAEMDSIPMGLNKHWVDPLPDVDGRQIAANMRGIGMM 487
Query 61 GYEMPEWKKLYLGKN-VSFGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETG 119
++PEWKK G N S+G K+ +SI EQR SLPI+KLKEQL++A+ +NQ+LIVIGETG
Sbjct 488 PNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETG 547
Query 120 SGKTTQMTQYMAEAGLVTPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFED 179
SGKTTQ+TQY+AEAG T G+ IGCTQPRRVAAMSVAKRV+EE+GC LGQEVGY+IRFED
Sbjct 548 SGKTTQITQYLAEAGYTTRGK-IGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFED 606
Query 180 CTSADTIIKYMTDGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPD 239
CTS +T+IKYMTDG+LLRE L+DP L +Y+++MLDEAHERTI TDVLFGLLK+ ++R D
Sbjct 607 CTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQD 666
Query 240 FKLIVT 245
KLIVT
Sbjct 667 MKLIVT 672
> hsa:1659 DHX8, DDX8, HRH1, PRP22, PRPF22; DEAH (Asp-Glu-Ala-His)
box polypeptide 8 (EC:3.6.4.13); K12818 ATP-dependent RNA
helicase DHX8/PRP22 [EC:3.6.4.13]
Length=1220
Score = 323 bits (827), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 157/246 (63%), Positives = 198/246 (80%), Gaps = 2/246 (0%)
Query 1 LARAAATAQSLAKERRDVRQAQEAAILDSIPKDMSRPWEDPNPQPGERTIAQALQGLGQT 60
L++AA +LAKERR+++QAQ A +DSIP +++ W DP P R IA ++G+G
Sbjct 472 LSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMM 531
Query 61 GYEMPEWKKLYLGKN-VSFGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETG 119
++PEWKK G N S+G K+ +SI EQR SLPI+KLKEQL++A+ +NQ+LIVIGETG
Sbjct 532 PNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETG 591
Query 120 SGKTTQMTQYMAEAGLVTPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFED 179
SGKTTQ+TQY+AEAG + G+ IGCTQPRRVAAMSVAKRV+EEFGC LGQEVGY+IRFED
Sbjct 592 SGKTTQITQYLAEAGYTSRGK-IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFED 650
Query 180 CTSADTIIKYMTDGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPD 239
CTS +T+IKYMTDG+LLRE L+DP L +Y+++MLDEAHERTI TDVLFGLLK+ ++R D
Sbjct 651 CTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQD 710
Query 240 FKLIVT 245
KLIVT
Sbjct 711 MKLIVT 716
> mmu:217207 Dhx8, Ddx8, KIAA4096, MGC31290, mDEAH6, mKIAA4096;
DEAH (Asp-Glu-Ala-His) box polypeptide 8 (EC:3.6.4.13); K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Length=1244
Score = 323 bits (827), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 157/246 (63%), Positives = 198/246 (80%), Gaps = 2/246 (0%)
Query 1 LARAAATAQSLAKERRDVRQAQEAAILDSIPKDMSRPWEDPNPQPGERTIAQALQGLGQT 60
L++AA +LAKERR+++QAQ A +DSIP +++ W DP P R IA ++G+G
Sbjct 496 LSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMM 555
Query 61 GYEMPEWKKLYLGKN-VSFGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETG 119
++PEWKK G N S+G K+ +SI EQR SLPI+KLKEQL++A+ +NQ+LIVIGETG
Sbjct 556 PNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETG 615
Query 120 SGKTTQMTQYMAEAGLVTPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFED 179
SGKTTQ+TQY+AEAG + G+ IGCTQPRRVAAMSVAKRV+EEFGC LGQEVGY+IRFED
Sbjct 616 SGKTTQITQYLAEAGYTSRGK-IGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFED 674
Query 180 CTSADTIIKYMTDGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPD 239
CTS +T+IKYMTDG+LLRE L+DP L +Y+++MLDEAHERTI TDVLFGLLK+ ++R D
Sbjct 675 CTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQD 734
Query 240 FKLIVT 245
KLIVT
Sbjct 735 MKLIVT 740
> cel:EEED8.5 mog-5; Masculinisation Of Germline family member
(mog-5); K12818 ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Length=1200
Score = 275 bits (703), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/250 (57%), Positives = 183/250 (73%), Gaps = 7/250 (2%)
Query 1 LARAAATAQSLAKERRDVR-QAQEAAILDSIPKDMSRPWEDPNPQPGERTIAQAL---QG 56
LA+AA +L+KER++ + QAQ +D+ K S +P G ++ A + +
Sbjct 444 LAQAALMQGALSKERKETKIQAQRERDMDT-QKGFSSNARILDPMSGNQSTAWSADESKD 502
Query 57 LGQTGYEMPEW-KKLYLGKNVSFGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVI 115
EMPEW K + G ++G ++ LS+ EQR SLPIF LK+ L++A+ +NQ+L+V+
Sbjct 503 RNNKMKEMPEWLKHVTAGGKATYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVVV 562
Query 116 GETGSGKTTQMTQYMAEAGLVTPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSI 175
GETGSGKTTQMTQY EAGL G+ IGCTQPRRVAAMSVAKRVAEE+GC+LG +VGY+I
Sbjct 563 GETGSGKTTQMTQYAIEAGLGRRGK-IGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTI 621
Query 176 RFEDCTSADTIIKYMTDGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCR 235
RFEDCTS DTIIKYMTDG+LLRE L+DP L YS++MLDEAHERTI TDVLFGLLK R
Sbjct 622 RFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAAR 681
Query 236 QRPDFKLIVT 245
+RP+ KLI+T
Sbjct 682 KRPELKLIIT 691
> bbo:BBOV_I002940 19.m02117; RNA helicase; K12818 ATP-dependent
RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Length=1156
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/252 (51%), Positives = 174/252 (69%), Gaps = 17/252 (6%)
Query 1 LARAAATAQSLAKERRDVRQAQEAAILDSIPKDMSRPWEDPNPQPGERTIAQALQGLGQT 60
LAR AT+ ++AKERR+ + QE D+I + N + +Q ++ L +
Sbjct 414 LARTIATSSTIAKERRETERMQE----DTIQRSAGAGSMTNN------STSQFMEELRRM 463
Query 61 GYEMPEWKKLYLGKNVSF---GIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGE 117
+ L+ ++ G + +I EQR SLPIF L+++LL+A+ N +LIV+GE
Sbjct 464 NMKQRREGALHDKRDPGTRKDGHNAIKTIQEQRESLPIFALRDELLQAVQENDILIVVGE 523
Query 118 TGSGKTTQMTQYMAEAGLVT----PGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGY 173
TGSGK+TQ+ QY+AE+G + +IGCTQPRRVAAMSVAKRV+EE GCRLGQEVGY
Sbjct 524 TGSGKSTQIPQYLAESGYTSGSDGESMVIGCTQPRRVAAMSVAKRVSEEVGCRLGQEVGY 583
Query 174 SIRFEDCTSADTIIKYMTDGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKEC 233
IRFEDCT+ DT+IK+MTDG+LLRE L DP L++Y+ +MLDEAHERTI+TDVLF LLK C
Sbjct 584 CIRFEDCTTKDTVIKFMTDGMLLREVLQDPLLEQYACIMLDEAHERTIATDVLFALLKNC 643
Query 234 CRQRPDFKLIVT 245
C +R +FKLIVT
Sbjct 644 CSKRENFKLIVT 655
> sce:YER013W PRP22; DEAH-box RNA-dependent ATPase/ATP-dependent
RNA helicase, associates with lariat intermediates before
the second catalytic step of splicing; mediates ATP-dependent
mRNA release from the spliceosome and unwinds RNA duplexes
(EC:3.6.1.-); K12818 ATP-dependent RNA helicase DHX8/PRP22
[EC:3.6.4.13]
Length=1145
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/246 (47%), Positives = 175/246 (71%), Gaps = 8/246 (3%)
Query 1 LARAAATAQSLAKERRDVRQAQEAAILDSIPKDMSRPWEDPNPQPGE-RTIAQALQGLGQ 59
+ R+A + ++ R+ + ++ I I K S ++DP + R Q L+
Sbjct 396 MNRSAINGSNAIRDHREEKLRKKREIEQQIRKQQS--FDDPTKNKKDSRNEIQMLKN--- 450
Query 60 TGYEMPEWKKLYLGKNVSFGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETG 119
+ EW+K + +++S+G +++L I+ QR++LP++ ++ +L++A+ +NQ L+++GETG
Sbjct 451 -QLIVTEWEKNRMNESISYGKRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETG 509
Query 120 SGKTTQMTQYMAEAGLVTPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFED 179
SGKTTQ+TQY+ E G G +IGCTQPRRVAA+SVAKRVAEE GC++G +VGY+IRFED
Sbjct 510 SGKTTQITQYLDEEGFSNYG-MIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFED 568
Query 180 CTSADTIIKYMTDGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPD 239
T DT IKYMTDG+L REAL+DP + +YSV+MLDEAHERT++TDVLF LLK+ +RP+
Sbjct 569 VTGPDTRIKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPE 628
Query 240 FKLIVT 245
K+IVT
Sbjct 629 LKVIVT 634
> ath:AT1G32490 ESP3; ESP3 (ENHANCED SILENCING PHENOTYPE 3); ATP
binding / ATP-dependent RNA helicase/ ATP-dependent helicase/
helicase/ nucleic acid binding; K12813 pre-mRNA-splicing
factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13]
Length=1044
Score = 225 bits (574), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/160 (64%), Positives = 132/160 (82%), Gaps = 1/160 (0%)
Query 86 IAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRLIGCT 145
+ E RRSLPI+ ++QLLKA+ +QVL+++G+TGSGKTTQ+ QY+ EAG G+ +GCT
Sbjct 397 LQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGK-VGCT 455
Query 146 QPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPRL 205
QPRRVAAMSVA RVA+E G +LG EVGYSIRFEDCTS T++KYMTDG+LLRE L +P L
Sbjct 456 QPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDL 515
Query 206 QRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
YSVV++DEAHERT+STD+LFGL+K+ R RPD KL+++
Sbjct 516 ASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLIS 555
> cel:C04H5.6 mog-4; Masculinisation Of Germline family member
(mog-4); K12813 pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16 [EC:3.6.4.13]
Length=1008
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 101/165 (61%), Positives = 131/165 (79%), Gaps = 0/165 (0%)
Query 81 KSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGR 140
K +SI E R+SLP++ ++ ++A+ +QVLI+ GETGSGKTTQ+ QY+ EAG G+
Sbjct 352 KKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGK 411
Query 141 LIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREAL 200
IGCTQPRRVAAMSVA RVA+E GC+LG +VGYSIRFEDCTS T++KYMTDG+LLRE L
Sbjct 412 RIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFL 471
Query 201 VDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
+P L YSV+M+DEAHERT+ TD+LFGL+K+ R R D KL+++
Sbjct 472 NEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLIS 516
> ath:AT2G35340 MEE29; MEE29 (maternal effect embryo arrest 29);
ATP binding / ATP-dependent RNA helicase/ ATP-dependent helicase/
helicase/ nucleic acid binding
Length=1044
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/169 (60%), Positives = 134/169 (79%), Gaps = 1/169 (0%)
Query 77 SFGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLV 136
S G + + E R++LPI+ ++QLL A+ ++QVLI++GETGSGKTTQ+ QY+ EAG
Sbjct 388 SAGKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYT 447
Query 137 TPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLL 196
G+ +GCTQPRRVAAMSVA RVA+E G +LG EVGYSIRFEDCTS TI+KYMTDG+LL
Sbjct 448 KLGK-VGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLL 506
Query 197 REALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
RE L +P L YSV+++DEAHERT+ TD+LFGL+K+ R RPD KL+++
Sbjct 507 RELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLIS 555
> dre:336645 dhx16, fa91b12, wu:fa91b12, zgc:55590; DEAH (Asp-Glu-Ala-His)
box polypeptide 16 (EC:3.6.4.13); K12813 pre-mRNA-splicing
factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13]
Length=1054
Score = 221 bits (562), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/164 (64%), Positives = 127/164 (77%), Gaps = 0/164 (0%)
Query 81 KSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGR 140
K SI E RRSLPIF +E LL AI ++Q+L++ GETGSGKTTQ+ QY+ E G G
Sbjct 400 KQKQSIQEVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEEGYTKGGM 459
Query 141 LIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREAL 200
IGCTQPRRVAAMSVA RVA+E +LG EVGYSIRFEDCTS TI+KYMTDG+LLRE L
Sbjct 460 KIGCTQPRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMTDGMLLREFL 519
Query 201 VDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIV 244
+P L YSV+++DEAHERT+ TD+LFGL+K+ R RPD K++V
Sbjct 520 TEPDLASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLV 563
> hsa:8449 DHX16, DBP2, DDX16, PRO2014, PRP8, PRPF2, Prp2; DEAH
(Asp-Glu-Ala-His) box polypeptide 16 (EC:3.6.4.13); K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13]
Length=981
Score = 220 bits (560), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 125/160 (78%), Gaps = 0/160 (0%)
Query 85 SIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRLIGC 144
SI RRSLP+F +E+LL AI N+QVLI+ GETGSGKTTQ+ QY+ E G G I C
Sbjct 331 SIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIAC 390
Query 145 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPR 204
TQPRRVAAMSVA RVA E G +LG EVGYSIRFEDCTS T+++YMTDG+LLRE L +P
Sbjct 391 TQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPD 450
Query 205 LQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIV 244
L YSVVM+DEAHERT+ TD+LFGL+K+ R RP+ K++V
Sbjct 451 LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLV 490
> mmu:64340 Dhx38, 5730550P09Rik, AI325984, AW540902, Ddx38, Prp16,
mKIAA0224; DEAH (Asp-Glu-Ala-His) box polypeptide 38 (EC:3.6.4.13);
K12815 pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP16 [EC:3.6.4.13]
Length=1228
Score = 220 bits (560), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/161 (65%), Positives = 132/161 (81%), Gaps = 1/161 (0%)
Query 85 SIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRLIGC 144
SI EQR+ LPIF ++++LL I +N ++IV+GETGSGKTTQ+TQY+ E G G +IGC
Sbjct 525 SILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG-MIGC 583
Query 145 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPR 204
TQPRRVAAMSVAKRV+EE G LG+EVGY+IRFEDCTS +T+IKYMTDG+LLRE+L +
Sbjct 584 TQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREAD 643
Query 205 LQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
L YS V++DEAHER+++TDVLFGLL+E +R D KLIVT
Sbjct 644 LDHYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVT 684
> ath:AT4G16680 RNA helicase, putative
Length=883
Score = 220 bits (560), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 102/158 (64%), Positives = 128/158 (81%), Gaps = 1/158 (0%)
Query 88 EQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRLIGCTQP 147
E R LPI +E+LLK I NQVL+++GETGSGKTTQ+ QY+ EAG G+ IGCTQP
Sbjct 217 EGREFLPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQYLQEAGYTKRGK-IGCTQP 275
Query 148 RRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPRLQR 207
RRVAAMSVA RVA+E G +LG EVGYSIRFEDCTS T+IKYMTDG+LLRE L++P+L
Sbjct 276 RRVAAMSVASRVAQEVGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDS 335
Query 208 YSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
YSV+++DEAHERT+STD+LF L+K+ + RPD +LI++
Sbjct 336 YSVIIIDEAHERTLSTDILFALVKDVAKVRPDLRLIIS 373
> dre:393850 dhx38, MGC63517, zgc:63517; DEAH (Asp-Glu-Ala-His)
box polypeptide 38 (EC:3.6.4.13); K12815 pre-mRNA-splicing
factor ATP-dependent RNA helicase PRP16 [EC:3.6.4.13]
Length=1258
Score = 219 bits (559), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 106/168 (63%), Positives = 133/168 (79%), Gaps = 3/168 (1%)
Query 78 FGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVT 137
F K TL EQR+ LPIF +++QLL I +N ++IV+GETGSGKTTQ+TQY+ E G +
Sbjct 550 FAKKKTL--LEQRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHEDGYTS 607
Query 138 PGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLR 197
G ++GCTQPRRVAAMSVAKRV+EE LG+EVGY+IRFEDCTS T+IKYMTDG+LLR
Sbjct 608 YG-MVGCTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDGILLR 666
Query 198 EALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
E+L + L YS V++DEAHER+++TDVLFGLL+E +R D KLIVT
Sbjct 667 ESLRESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVT 714
> mmu:69192 Dhx16, 2410006N22Rik, DBP2, Ddx16, mKIAA0577; DEAH
(Asp-Glu-Ala-His) box polypeptide 16 (EC:3.6.4.13); K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13]
Length=1044
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 125/160 (78%), Gaps = 0/160 (0%)
Query 85 SIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRLIGC 144
SI RRSLP+F +E+LL AI N+QVLI+ GETGSGKTTQ+ QY+ E G G I C
Sbjct 394 SIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIAC 453
Query 145 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPR 204
TQPRRVAAMSVA RVA E G +LG EVGYSIRFEDCTS T+++YMTDG+LLRE L +P
Sbjct 454 TQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPD 513
Query 205 LQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIV 244
L YSVVM+DEAHERT+ TD+LFGL+K+ R RP+ K++V
Sbjct 514 LASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLV 553
> hsa:9785 DHX38, DDX38, KIAA0224, PRP16, PRPF16; DEAH (Asp-Glu-Ala-His)
box polypeptide 38 (EC:3.6.4.13); K12815 pre-mRNA-splicing
factor ATP-dependent RNA helicase PRP16 [EC:3.6.4.13]
Length=1227
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 104/161 (64%), Positives = 132/161 (81%), Gaps = 1/161 (0%)
Query 85 SIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRLIGC 144
SI EQR+ LPIF ++++LL I +N ++IV+GETGSGKTTQ+TQY+ E G G +IGC
Sbjct 524 SILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYG-MIGC 582
Query 145 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPR 204
TQPRRVAAMSVAKRV+EE G LG+EVGY+IRFEDCTS +T+IKYMTDG+LLRE+L +
Sbjct 583 TQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREAD 642
Query 205 LQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
L YS +++DEAHER+++TDVLFGLL+E +R D KLIVT
Sbjct 643 LDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVT 683
> tgo:TGME49_063650 pre-mRNA splicing factor RNA helicase, putative
(EC:3.4.22.44); K12813 pre-mRNA-splicing factor ATP-dependent
RNA helicase DHX16 [EC:3.6.4.13]
Length=1041
Score = 219 bits (557), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 105/162 (64%), Positives = 128/162 (79%), Gaps = 1/162 (0%)
Query 84 LSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRLIG 143
LS+ E+R+ LP++ + + L+A+ VLIV+GETGSGKTTQ+ QY+ E G G+ IG
Sbjct 390 LSLQEERKMLPVYAFRTEFLRAVREYPVLIVVGETGSGKTTQLPQYLYEVGYGKAGK-IG 448
Query 144 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDP 203
CTQPRRVAAMSVA RVA E GCRLG EVGYSIRFEDCTS T++KYMTDG+LLRE L +P
Sbjct 449 CTQPRRVAAMSVAARVATEVGCRLGLEVGYSIRFEDCTSDRTVLKYMTDGMLLREFLTEP 508
Query 204 RLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
L YSV+M+DEAHERT+ TDVLFGL+K+ R R DFKLIV+
Sbjct 509 DLASYSVMMIDEAHERTLHTDVLFGLVKDLARFRNDFKLIVS 550
> bbo:BBOV_IV011160 23.m05966; RNA helicase (EC:3.6.1.-); K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
[EC:3.6.4.13]
Length=931
Score = 219 bits (557), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 129/164 (78%), Gaps = 1/164 (0%)
Query 81 KSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGR 140
K + E+R LPI+ + +LL A+ N+ +L+V+GETGSGKTTQ+ QY+ E G G+
Sbjct 281 KEHRKLLEERCRLPIYGYRHELLAAVRNHPILVVVGETGSGKTTQIPQYLYEVGYGKAGK 340
Query 141 LIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREAL 200
IGCTQPRRVAAMSVA RVA+E G +LGQEVGYSIRFEDCTS T++KYMTDG+LLRE +
Sbjct 341 -IGCTQPRRVAAMSVATRVAQEVGTKLGQEVGYSIRFEDCTSNQTVVKYMTDGMLLREMM 399
Query 201 VDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIV 244
+P L YSV+M+DEAHERT+ TD++FGL+K+ CR R DF+LIV
Sbjct 400 TEPDLSSYSVMMIDEAHERTVHTDIIFGLVKDLCRYRDDFRLIV 443
> tgo:TGME49_033520 ATP-dependent RNA helicase, putative (EC:3.4.22.44);
K12820 pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX15/PRP43 [EC:3.6.4.13]
Length=801
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/182 (58%), Positives = 136/182 (74%), Gaps = 4/182 (2%)
Query 63 EMPEWKKLYLGKNVSFGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGK 122
E+PE Y G S + I E R+ LP + K+ LK + N+ +I++GETGSGK
Sbjct 97 EVPEGINPYTGAPYS---QRYYKILEGRKKLPSWNAKKNFLKLVKRNRTVILVGETGSGK 153
Query 123 TTQMTQYMAEAGLVTPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTS 182
TTQMTQ++ EAGL G+ + CTQPRRVAAMSVA+RVA+E LG+EVGY+IRFED +S
Sbjct 154 TTQMTQFLIEAGLHQ-GKCVACTQPRRVAAMSVAQRVADEMDVELGKEVGYTIRFEDKSS 212
Query 183 ADTIIKYMTDGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKL 242
TI+KYMTDG+LLREA+ DP L+RYSVV+LDEAHERT++TDVLFGLLKE C+ RP K+
Sbjct 213 PMTILKYMTDGMLLREAMADPLLERYSVVVLDEAHERTLATDVLFGLLKEVCKNRPTLKM 272
Query 243 IV 244
+V
Sbjct 273 VV 274
> ath:AT3G62310 RNA helicase, putative; K12820 pre-mRNA-splicing
factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13]
Length=726
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/165 (61%), Positives = 132/165 (80%), Gaps = 5/165 (3%)
Query 85 SIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEA--GLVTPGR-- 140
I E+RR+LP++ KE+ LK + NNQ LI++GETGSGKTTQ+ Q++ +A + R
Sbjct 53 DILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRK 112
Query 141 -LIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREA 199
L+GCTQPRRVAAMSV++RVAEE +G+EVGYSIRFEDC+S T++KY+TDG+LLREA
Sbjct 113 WLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREA 172
Query 200 LVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIV 244
+ DP L+RY V++LDEAHERT++TDVLFGLLKE + RPD KL+V
Sbjct 173 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVV 217
> cel:K03H1.2 mog-1; Masculinisation Of Germline family member
(mog-1); K12815 pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16 [EC:3.6.4.13]
Length=1131
Score = 214 bits (544), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/161 (62%), Positives = 127/161 (78%), Gaps = 1/161 (0%)
Query 85 SIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRLIGC 144
SI +QR LP+F +++++ I N V+I++GETGSGKTTQ+ QY+ E G G LIGC
Sbjct 433 SIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSG-LIGC 491
Query 145 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPR 204
TQPRRVAAMSVA+RVA+E G LGQ+VGY+IRFEDCTS TIIKYMTDG+LLRE L D
Sbjct 492 TQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGS 551
Query 205 LQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
L +YS +++DEAHER+++TDVLFGLL+E +R D KLIVT
Sbjct 552 LDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVT 592
> ath:AT2G47250 RNA helicase, putative; K12820 pre-mRNA-splicing
factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13]
Length=729
Score = 213 bits (541), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 131/166 (78%), Gaps = 5/166 (3%)
Query 84 LSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVT---PGR 140
I E+RR LP++ K+ L + +NQ LI++GETGSGKTTQ+ Q++ +A + GR
Sbjct 56 FEILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGR 115
Query 141 --LIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLRE 198
L+GCTQPRRVAAMSV++RVA+E +G+EVGYSIRFEDCTS+ T++KY+TDG+LLRE
Sbjct 116 KWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLRE 175
Query 199 ALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIV 244
A+ DP L+RY V++LDEAHERT++TDVLFGLLKE R RPD KL+V
Sbjct 176 AMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVV 221
> cpv:cgd7_640 Prp16p pre-mRNA splicing factor. HrpA family SFII
helicase ; K12815 pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP16 [EC:3.6.4.13]
Length=1042
Score = 209 bits (532), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 127/156 (81%), Gaps = 1/156 (0%)
Query 90 RRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRLIGCTQPRR 149
RRSLP++K+++ L+K I + V++V+GETGSGKTTQ+TQY+ E G G +IGCTQPRR
Sbjct 316 RRSLPVYKVRDSLIKLIGEHMVVVVVGETGSGKTTQLTQYLHEFGYSKRG-IIGCTQPRR 374
Query 150 VAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPRLQRYS 209
VAA+SVA+RVA+E LG+EVGY+IRFED TS T+IKYMTDG+L+RE+L DP L+RYS
Sbjct 375 VAAVSVAQRVADEMNVDLGKEVGYTIRFEDFTSKSTVIKYMTDGVLMRESLSDPELERYS 434
Query 210 VVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
+++DEAHER+++TDVLFG+ + R DF+LIVT
Sbjct 435 AIIMDEAHERSLNTDVLFGIFRSVLSNRRDFRLIVT 470
> tgo:TGME49_060200 ATP-dependent RNA helicase, putative (EC:3.6.1.15
2.7.1.127); K12815 pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP16 [EC:3.6.4.13]
Length=1280
Score = 204 bits (518), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 136/214 (63%), Gaps = 51/214 (23%)
Query 83 TLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPG--- 139
T S+AEQRRSLP++ ++++ L + +Q+++V+GETGSGKTTQ+TQY+ EAG +PG
Sbjct 461 TQSLAEQRRSLPVYAVRDEFLHIVREHQIVVVVGETGSGKTTQLTQYLFEAGYASPGPSR 520
Query 140 ------------------------------------------------RLIGCTQPRRVA 151
LIGCTQPRRVA
Sbjct 521 EPQASSLQRLVRSSPEMLLPQKRQKVAEEDPQDSAQNGLPAFAVAPSVSLIGCTQPRRVA 580
Query 152 AMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPRLQRYSVV 211
A+SVAKRVA+E G LG++VGY+IRFEDCTS T IKYMTDG+LLRE+L D L +Y+ V
Sbjct 581 AVSVAKRVADEMGTALGEDVGYAIRFEDCTSERTRIKYMTDGVLLRESLSDADLDKYAAV 640
Query 212 MLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
++DEAHER+++TDVLFG+LK +R DFKLIVT
Sbjct 641 IMDEAHERSLNTDVLFGILKGVAARRRDFKLIVT 674
> ath:AT5G13010 EMB3011 (embryo defective 3011); ATP binding /
RNA helicase/ helicase/ nucleic acid binding; K12815 pre-mRNA-splicing
factor ATP-dependent RNA helicase PRP16 [EC:3.6.4.13]
Length=1226
Score = 203 bits (516), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/174 (59%), Positives = 134/174 (77%), Gaps = 8/174 (4%)
Query 73 GKNVS-FGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMA 131
G+ VS F + T+ AEQR+ LPIF ++++LL+ I NQV++V+GETGSGKTTQ+TQ
Sbjct 514 GEAVSEFAMSKTM--AEQRQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQ--- 568
Query 132 EAGLVTPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMT 191
G G ++GCTQPRRVAAMSVAKRV+EE LG ++GY+IRFED T +T+IKYMT
Sbjct 569 -DGYTING-IVGCTQPRRVAAMSVAKRVSEEMETELGDKIGYAIRFEDVTGPNTVIKYMT 626
Query 192 DGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
DG+LLRE L D L +Y VV++DEAHER+++TDVLFG+LK+ +R DFKLIVT
Sbjct 627 DGVLLRETLKDSDLDKYRVVVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVT 680
> cpv:cgd1_2650 hypothetical protein
Length=867
Score = 202 bits (514), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 94/152 (61%), Positives = 121/152 (79%), Gaps = 1/152 (0%)
Query 86 IAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRLIGCT 145
I + R SLP+ K KEQ++K++ + +LIV+GETGSGKTTQ+ QY+ EAG G +I CT
Sbjct 193 INDVRNSLPVVKFKEQIIKSLEEHPILIVVGETGSGKTTQIPQYLFEAGYYKNG-IIACT 251
Query 146 QPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPRL 205
QPRRVAAMSVA RVA+E G RLG VGYSIRFEDCTS +T++KYMTDG+LLRE L +P L
Sbjct 252 QPRRVAAMSVAARVAKEMGSRLGGLVGYSIRFEDCTSEETVVKYMTDGILLREFLSEPDL 311
Query 206 QRYSVVMLDEAHERTISTDVLFGLLKECCRQR 237
+ YS +++DEAHER++ TD+LFGL+K+ R R
Sbjct 312 KNYSCILIDEAHERSLHTDILFGLVKDVSRFR 343
> xla:414571 dhx15, MGC81281; DEAH (Asp-Glu-Ala-His) box polypeptide
15; K12820 pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX15/PRP43 [EC:3.6.4.13]
Length=761
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/161 (60%), Positives = 125/161 (77%), Gaps = 2/161 (1%)
Query 86 IAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEA--GLVTPGRLIG 143
I ++R LP+++ KE+ + + NQ +++GETGSGKTTQ+ Q+ + L P R +
Sbjct 96 ILKKRLLLPVWEYKERFTEILMKNQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRAVA 155
Query 144 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDP 203
CTQPRRVAAMSVA+RVA+E LGQEVGYSIRFEDC+SA TI+KYMTDG+LLREA+ DP
Sbjct 156 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 215
Query 204 RLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIV 244
L+RY VV+LDEAHERT++TD+L G+LKE RQR D K+IV
Sbjct 216 LLERYGVVILDEAHERTLATDILMGVLKEVVRQRNDLKVIV 256
> tpv:TP03_0394 splicing factor; K12815 pre-mRNA-splicing factor
ATP-dependent RNA helicase PRP16 [EC:3.6.4.13]
Length=1007
Score = 201 bits (511), Expect = 2e-51, Method: Composition-based stats.
Identities = 94/156 (60%), Positives = 126/156 (80%), Gaps = 1/156 (0%)
Query 90 RRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRLIGCTQPRR 149
R+SLP+++ K +++ I QV+I++GETGSGKTTQ+ QY+ E+G G +IGCTQPRR
Sbjct 305 RKSLPVYQHKHEIISLIKQFQVIILVGETGSGKTTQLPQYLYESGFGDKG-IIGCTQPRR 363
Query 150 VAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPRLQRYS 209
VAAMSV+KRVA E G LG VGY+IRFED TS++T +K+MTDG+LLRE+L+D L +YS
Sbjct 364 VAAMSVSKRVASEMGSNLGDTVGYTIRFEDVTSSNTRVKFMTDGILLRESLMDSDLDKYS 423
Query 210 VVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
VV++DEAHER+++TDVLFG+LK +R DF+LIVT
Sbjct 424 VVIMDEAHERSLNTDVLFGILKSVLTRRWDFRLIVT 459
> mmu:71715 Dhx35, 1200009D07Rik, Ddx35; DEAH (Asp-Glu-Ala-His)
box polypeptide 35 (EC:3.6.1.-); K13117 ATP-dependent RNA
helicase DDX35 [EC:3.6.4.13]
Length=679
Score = 200 bits (509), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 129/173 (74%), Gaps = 1/173 (0%)
Query 73 GKNVSFGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAE 132
G + + + LSI +QR+ LP+FKL+ +L + N Q ++++GETG GK+TQ+ QY+AE
Sbjct 34 GTTIIYNPYAALSIEQQRQKLPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAE 93
Query 133 AGLVTPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSA-DTIIKYMT 191
AG GR++G TQPRRVAA++VA RVA+E G LG EVGY IRF+DCT T IK++T
Sbjct 94 AGWTAEGRVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLT 153
Query 192 DGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIV 244
DG+L+RE +VDP L +YSV+MLDEAHERT+ TD+ GLLK+ ++R D +LIV
Sbjct 154 DGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIV 206
> hsa:1665 DHX15, DBP1, DDX15, HRH2, PRP43, PRPF43, PrPp43p; DEAH
(Asp-Glu-Ala-His) box polypeptide 15 (EC:3.6.4.13); K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
[EC:3.6.4.13]
Length=795
Score = 199 bits (507), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/161 (59%), Positives = 124/161 (77%), Gaps = 2/161 (1%)
Query 86 IAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEA--GLVTPGRLIG 143
I ++R LP+++ K++ + +Q +++GETGSGKTTQ+ Q+ E L P R +
Sbjct 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query 144 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDP 203
CTQPRRVAAMSVA+RVA+E LGQEVGYSIRFEDC+SA TI+KYMTDG+LLREA+ DP
Sbjct 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query 204 RLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIV 244
L+RY V++LDEAHERT++TD+L G+LKE RQR D K+IV
Sbjct 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIV 290
> mmu:13204 Dhx15, DBP1, Ddx15, HRH2, MGC117685, mDEAH9; DEAH
(Asp-Glu-Ala-His) box polypeptide 15 (EC:3.6.4.13); K12820 pre-mRNA-splicing
factor ATP-dependent RNA helicase DHX15/PRP43
[EC:3.6.4.13]
Length=703
Score = 199 bits (506), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 95/161 (59%), Positives = 124/161 (77%), Gaps = 2/161 (1%)
Query 86 IAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEA--GLVTPGRLIG 143
I ++R LP+++ K++ + +Q +++GETGSGKTTQ+ Q+ E L P R +
Sbjct 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query 144 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDP 203
CTQPRRVAAMSVA+RVA+E LGQEVGYSIRFEDC+SA TI+KYMTDG+LLREA+ DP
Sbjct 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query 204 RLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIV 244
L+RY V++LDEAHERT++TD+L G+LKE RQR D K+IV
Sbjct 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIV 290
> dre:321931 dhx15, im:2639158, wu:fb38f09, wu:fk62f05; DEAH (Asp-Glu-Ala-His)
box polypeptide 15 (EC:3.6.1.-); K12820 pre-mRNA-splicing
factor ATP-dependent RNA helicase DHX15/PRP43
[EC:3.6.4.13]
Length=769
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/161 (59%), Positives = 124/161 (77%), Gaps = 2/161 (1%)
Query 86 IAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEA--GLVTPGRLIG 143
I ++R LP+++ KE+ + +Q +++GETGSGKTTQ+ Q+ + L P R +
Sbjct 104 ILKKRLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRGVA 163
Query 144 CTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDP 203
CTQPRRVAAMSVA+RVA+E LGQEVGYSIRFEDC+SA TI+KYMTDG+LLREA+ DP
Sbjct 164 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 223
Query 204 RLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIV 244
L+RY V++LDEAHERT++TD+L G+LKE RQR D K+IV
Sbjct 224 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIV 264
> ath:AT1G26370 RNA helicase, putative
Length=717
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/152 (60%), Positives = 122/152 (80%), Gaps = 0/152 (0%)
Query 86 IAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRLIGCT 145
IAE RRSLPI ++++L++ + N +LI++GETGSGKTTQ+ Q++ AG G++IG T
Sbjct 34 IAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGIT 93
Query 146 QPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPRL 205
QPRR+AA++VAKRVAEE +LGQ+VGYSIRF+D TS T +KYMTDGLLLREAL+DP L
Sbjct 94 QPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHL 153
Query 206 QRYSVVMLDEAHERTISTDVLFGLLKECCRQR 237
RYSV+++DEAH+R++ TDVL LLK+ R R
Sbjct 154 SRYSVIIVDEAHDRSVHTDVLLALLKKIQRTR 185
> bbo:BBOV_IV002560 21.m03072; DEAH box RNA helicase (EC:3.6.1.-);
K12815 pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16 [EC:3.6.4.13]
Length=1016
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/165 (56%), Positives = 126/165 (76%), Gaps = 1/165 (0%)
Query 81 KSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGR 140
+S + E R LP+FK +++LL I QV++V+GETGSGKTTQ+ Q++ E+G G
Sbjct 317 ESKKKLRETREQLPVFKCRDELLSYIGQFQVMVVVGETGSGKTTQLAQFLYESGYYKRG- 375
Query 141 LIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREAL 200
+IGCTQPRRVAA+SV +RVA E G R+G VGYSIRFED TS +T +K+MTDG+LLRE L
Sbjct 376 VIGCTQPRRVAAVSVCQRVAAEMGSRVGDLVGYSIRFEDLTSRNTAVKFMTDGILLRETL 435
Query 201 VDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
+DP L RYS +++DEAHER+++TDVLFG+LK +R D ++IVT
Sbjct 436 MDPDLDRYSCIIMDEAHERSLNTDVLFGILKSVVARRRDIRVIVT 480
> sce:YNR011C PRP2, RNA2; Prp2p (EC:3.6.1.-); K12814 pre-mRNA-splicing
factor ATP-dependent RNA helicase-like protein PRP2
[EC:3.6.4.13]
Length=876
Score = 196 bits (499), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 134/187 (71%), Gaps = 5/187 (2%)
Query 64 MPEWKKLY---LGKNVSFGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGS 120
+PE K Y L + + K L+I E R+ LP+ + K++LL+ I NQVLI++GETGS
Sbjct 191 LPEEKLQYEARLAQALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGS 250
Query 121 GKTTQMTQYMAEAGLVTPGRL-IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFED 179
GKTTQ+ QY+ E G G+L I TQPRRVAA SVA RVA+E LG+EVGY IRFED
Sbjct 251 GKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFED 310
Query 180 CTSAD-TIIKYMTDGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRP 238
T+ + T++KYMTDG+LLRE L D +L +YS +M+DEAHERT++TD+L GLLK+ QRP
Sbjct 311 KTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRP 370
Query 239 DFKLIVT 245
KL+++
Sbjct 371 TLKLLIS 377
> sce:YGL120C PRP43; Prp43p (EC:3.6.1.-); K12820 pre-mRNA-splicing
factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13]
Length=767
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 147/220 (66%), Gaps = 5/220 (2%)
Query 30 IPKDMSRPWEDPNPQPGERTIAQALQGLGQTGYEMPEWKKLYLGKNVSF-GIKST---LS 85
I +++S+ P+ +P A +GL + E +KL GK F G + T +
Sbjct 26 IAEELSKQHPLPSEEPLVHHDAGEFKGLQRHHTSAEEAQKLEDGKINPFTGREFTPKYVD 85
Query 86 IAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQY-MAEAGLVTPGRLIGC 144
I + RR LP+ +++ LK NNQ+++ +GETGSGKTTQ+ Q+ + + + C
Sbjct 86 ILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVAC 145
Query 145 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPR 204
TQPRRVAAMSVA+RVAEE +LG+EVGYSIRFE+ TS TI+KYMTDG+LLREA+ D
Sbjct 146 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 205
Query 205 LQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIV 244
L RYS ++LDEAHERT++TD+L GLLK+ ++RPD K+I+
Sbjct 206 LSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIII 245
> dre:100037310 zgc:158828
Length=250
Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 128/173 (73%), Gaps = 1/173 (0%)
Query 73 GKNVSFGIKSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAE 132
G + F + L+I +QR+ LP+FK + +L + + Q ++++GETGSGK+TQ+ QY+ E
Sbjct 32 GSPIVFNPHTALTIEKQRQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLE 91
Query 133 AGLVTPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSAD-TIIKYMT 191
AG G++IG TQPRRVAA SVA RVAEE G LG EVGY+IRF+DC+ T IK++T
Sbjct 92 AGWAAEGKVIGVTQPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLT 151
Query 192 DGLLLREALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIV 244
DG+L+RE + DP L++YSV++LDEAHERT+ TD+ GLLK+ ++R D +LIV
Sbjct 152 DGMLVREMMSDPLLKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIV 204
> pfa:MAL13P1.322 splicing factor, putative; K12815 pre-mRNA-splicing
factor ATP-dependent RNA helicase PRP16 [EC:3.6.4.13]
Length=1151
Score = 193 bits (490), Expect = 6e-49, Method: Composition-based stats.
Identities = 96/169 (56%), Positives = 125/169 (73%), Gaps = 5/169 (2%)
Query 81 KSTLSIAEQ----RRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLV 136
K+TL E+ + SLPI+K K +LL A+ NN ++I++GETGSGKTTQ+ QY+ E G
Sbjct 463 KNTLKDKEELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYH 522
Query 137 TPGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLL 196
G +I CTQPRRVAA+SVA RV+ E +G VGY+IRFED T+ DT I+Y+TDG+LL
Sbjct 523 RNG-IICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILL 581
Query 197 REALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
RE L D L +YSV+++DEAHER+I+TDVL G+LK C +R D KLIVT
Sbjct 582 RETLNDKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVT 630
> tpv:TP01_0641 RNA helicase
Length=974
Score = 192 bits (489), Expect = 6e-49, Method: Composition-based stats.
Identities = 93/160 (58%), Positives = 122/160 (76%), Gaps = 1/160 (0%)
Query 86 IAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRLIGCT 145
I ++R+ LPI+ + +LL AI + LIV+GETGSGKTTQ+ QY+ E G G +IG T
Sbjct 302 ILQERQKLPIYYYRTELLSAIKKYKTLIVVGETGSGKTTQIPQYLHEVGYSRAG-VIGIT 360
Query 146 QPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPRL 205
QPRRVAAMSVA RV++E ++G VGY IRFED TS++T IKYMTDG+LLRE +P L
Sbjct 361 QPRRVAAMSVATRVSKELNVKMGSTVGYCIRFEDYTSSNTKIKYMTDGILLREFASNPTL 420
Query 206 QRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
+ YSV+M+DEAHERT+ TDV+FGL+K+ R R DF+LI++
Sbjct 421 ENYSVIMIDEAHERTLHTDVIFGLVKDLIRYRNDFRLIIS 460
> bbo:BBOV_I004340 19.m02126; pre-mRNA splicing factor RNA helicase;
K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase
DHX15/PRP43 [EC:3.6.4.13]
Length=703
Score = 192 bits (488), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/160 (57%), Positives = 121/160 (75%), Gaps = 1/160 (0%)
Query 85 SIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRLIGC 144
+I E+RR LP + ++ +K + NQV+I++GETGSGKTTQ+ Q++ + L G +
Sbjct 51 TILEKRRELPAWSARKNFVKLLRRNQVIILVGETGSGKTTQIPQFVVNSKL-NQGLQVAV 109
Query 145 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPR 204
TQPRRVAAMSVA RVA+E LG+ VGYSIRFED TS +T+IK+MTDG+LLREA+ DP
Sbjct 110 TQPRRVAAMSVAARVADEMDVELGETVGYSIRFEDKTSKNTVIKFMTDGMLLREAITDPM 169
Query 205 LQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIV 244
L+ Y V++LDEAHERT+STDVLFGL+KE R D K++V
Sbjct 170 LRNYGVIILDEAHERTVSTDVLFGLIKEVAGSREDLKIVV 209
> cel:F56D2.6 hypothetical protein; K12820 pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13]
Length=739
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/167 (54%), Positives = 120/167 (71%), Gaps = 7/167 (4%)
Query 85 SIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAE-------AGLVT 137
+I E+R LP+++ KE+ ++ + NNQ + ++GETGSGKTTQ+ Q+ E
Sbjct 68 AIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPG 127
Query 138 PGRLIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLR 197
RL+ CTQPRRVAAMSVA RVAEE LGQEVGYSIRFEDC S T++KY TDG+LLR
Sbjct 128 QARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLR 187
Query 198 EALVDPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIV 244
EA+ P L +Y V++LDEAHERT++TD+L GL+KE R R D K+++
Sbjct 188 EAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVI 234
> ath:AT4G18465 RNA helicase, putative; K13117 ATP-dependent RNA
helicase DDX35 [EC:3.6.4.13]
Length=704
Score = 189 bits (481), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 126/171 (73%), Gaps = 10/171 (5%)
Query 85 SIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRLIGC 144
+I +QR+ LP++K + ++L + N+ I++GETGSGKTTQ+ QY+ EAG GR+I C
Sbjct 40 NIEKQRQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIAC 99
Query 145 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFED-CTSADTIIKYMTDGLLLREALVDP 203
TQPRR+A +V+ RVAEE G LG+EVGY+IRFED TS T +K++TDG+L+RE + DP
Sbjct 100 TQPRRLAVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDP 159
Query 204 RLQRYSVVMLDEAHERTISTDVLFGLLKECC---------RQRPDFKLIVT 245
L +YSV+M+DEAHER+ISTD+L GLLK+ R+RP+ +LI++
Sbjct 160 LLTKYSVIMIDEAHERSISTDILLGLLKKVSQSNTVLIIQRRRPELRLIIS 210
> tpv:TP01_0544 RNA helicase
Length=910
Score = 188 bits (477), Expect = 2e-47, Method: Composition-based stats.
Identities = 102/216 (47%), Positives = 129/216 (59%), Gaps = 53/216 (24%)
Query 81 KSTLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAE-------- 132
++ SI E+RR LPIFKL++++++ I NQ+LIVIGETGSGKTTQ+ QY+ E
Sbjct 137 RTNRSIQEERRGLPIFKLRDEIIREIIENQILIVIGETGSGKTTQIPQYLYESHFHHYHT 196
Query 133 ----------------------------------AGLVTPGR---------LIGCTQPRR 149
A + R +IG TQPRR
Sbjct 197 FLTLIHNTTDNTTDNSVDNSTDNTVDSVEGTVQTAAVTAADRVNKANRISCMIGITQPRR 256
Query 150 VAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPRLQRYS 209
++ +++AKRV++E GC +G EVGY IRF D TS TIIKYMTDG+LLRE L DP L Y+
Sbjct 257 ISCINIAKRVSDEIGCTVGDEVGYCIRFSDVTSDKTIIKYMTDGMLLREILHDPLLTNYT 316
Query 210 VVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
+MLDEAHERTI+TDVLF LLK QR DF+LIVT
Sbjct 317 TIMLDEAHERTIATDVLFSLLK--VSQRSDFRLIVT 350
> tpv:TP01_1019 ATP-dependent RNA helicase; K12820 pre-mRNA-splicing
factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13]
Length=729
Score = 183 bits (464), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 119/160 (74%), Gaps = 1/160 (0%)
Query 85 SIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRLIGC 144
++ E R+ LP + ++ +K + NQVL+++GETGSGKTTQMTQ+ +AGL + + I
Sbjct 72 NVLEGRKKLPAWSARKNFVKLVKRNQVLVLVGETGSGKTTQMTQFALDAGL-SGLKPIAI 130
Query 145 TQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALVDPR 204
TQPRRVAAMSVA RVAEE LG VGY+IRFED +S T++++MTDG+LL+E D
Sbjct 131 TQPRRVAAMSVATRVAEEMDVELGATVGYTIRFEDKSSEKTMLRFMTDGMLLKEITTDKM 190
Query 205 LQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIV 244
L Y +V+LDEAHERTI+TDVLFGLLK+ +QR + KL++
Sbjct 191 LSHYGMVILDEAHERTIATDVLFGLLKDLIKQRSELKLVI 230
> cel:Y67D2.6 hypothetical protein; K13117 ATP-dependent RNA helicase
DDX35 [EC:3.6.4.13]
Length=732
Score = 179 bits (453), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 120/164 (73%), Gaps = 0/164 (0%)
Query 82 STLSIAEQRRSLPIFKLKEQLLKAITNNQVLIVIGETGSGKTTQMTQYMAEAGLVTPGRL 141
++L+I +QR LPIFK + +L + +I++GETG GK+TQ+ Q++ EAG GR
Sbjct 66 ASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQ 125
Query 142 IGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYSIRFEDCTSADTIIKYMTDGLLLREALV 201
I TQPRRVA +++A RVAEE C LG +VGY++RF+D + DT +K+MTDGLLLRE L
Sbjct 126 IVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILA 185
Query 202 DPRLQRYSVVMLDEAHERTISTDVLFGLLKECCRQRPDFKLIVT 245
DP L +YS++M+DEAHER+ +TD+L GLL++ + R D ++IV+
Sbjct 186 DPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVS 229
Lambda K H
0.319 0.134 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 8636871780
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40