bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_0183_orf5
Length=274
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_060240 CCR4-NOT transcription complex subunit, puta... 448 1e-125
pfa:MAL8P1.104 CAF1 family ribonuclease, putative; K12581 CCR4... 381 1e-105
bbo:BBOV_III006830 17.m07605; CAF1 family ribonuclease contain... 363 4e-100
tpv:TP04_0580 hypothetical protein; K12581 CCR4-NOT transcript... 350 3e-96
mmu:18983 Cnot7, AU022737, Caf1, Pop2; CCR4-NOT transcription ... 297 3e-80
hsa:29883 CNOT7, CAF1, hCAF-1; CCR4-NOT transcription complex,... 297 4e-80
xla:734751 cnot7, MGC130876, caf1; CCR4-NOT transcription comp... 295 1e-79
dre:768119 cnot7, CAF1, fd59c07, fj07d05, wu:fd59c07, wu:fj07d... 295 1e-79
hsa:9337 CNOT8, CAF1, CALIF, POP2, hCAF1; CCR4-NOT transcripti... 288 1e-77
mmu:69125 Cnot8, 1500015I04Rik, 1810022F04Rik, AA536816, AU015... 288 2e-77
dre:406788 cnot8, wu:fe49a05, zgc:63844; CCR4-NOT transcriptio... 286 4e-77
xla:379811 cnot8, MGC52767; CCR4-NOT transcription complex, su... 283 4e-76
ath:AT1G80780 CCR4-NOT transcription complex protein, putative... 274 2e-73
ath:AT2G32070 CCR4-NOT transcription complex protein, putative 271 1e-72
cpv:cgd3_350 Pop2p-like 3'5' exonuclease, CCR4-NOT transcripti... 268 1e-71
dre:100334227 CCR4-NOT transcription complex, subunit 8-like 266 6e-71
ath:AT5G10960 CCR4-NOT transcription complex protein, putative... 258 1e-68
ath:AT1G15920 CCR4-NOT transcription complex protein, putative 240 5e-63
cel:Y56A3A.20 ccf-1; yeast CCR4 Associated Factor family membe... 218 2e-56
ath:AT5G22250 CCR4-NOT transcription complex protein, putative 202 1e-51
ath:AT3G44260 CCR4-NOT transcription complex protein, putative 187 3e-47
sce:YNR052C POP2, CAF1; Pop2p (EC:3.1.13.4); K12581 CCR4-NOT t... 172 8e-43
ath:AT1G61470 CCR4-NOT transcription complex protein, putative 140 3e-33
ath:AT1G06450 CCR4-NOT transcription complex protein, putative 139 1e-32
ath:AT1G27820 CCR4-NOT transcription complex protein, putative 133 6e-31
ath:AT1G27890 CCR4-NOT transcription complex protein, putative 130 5e-30
ath:AT3G44240 CCR4-NOT transcription complex protein, putative 127 5e-29
dre:568260 si:dkey-40i22.3; K13202 target of EGR1 protein 1 42.4
tpv:TP04_0261 hypothetical protein; K13202 target of EGR1 prot... 40.0 0.009
dre:791461 parn, MGC56067, zgc:56067; poly(A)-specific ribonuc... 38.5 0.024
sce:YJL207C LAA1; AP-1 accessory protein; colocalizes with cla... 38.1 0.033
mmu:240023 Pnldc1, FLJ35820, Gm313; poly(A)-specific ribonucle... 36.6 0.11
mmu:74108 Parn, 1200003I18Rik, DAN; poly(A)-specific ribonucle... 35.4 0.24
tpv:TP02_0676 hypothetical protein; K01148 poly(A)-specific ri... 34.7 0.36
xla:394409 parn, parn-A, xparn; poly(A)-specific ribonuclease ... 34.7 0.38
hsa:154197 PNLDC1, FLJ40240, MGC138451, dJ195P10.2; poly(A)-sp... 34.3 0.49
hsa:23230 VPS13A, CHAC, CHOREIN, FLJ42030, KIAA0986; vacuolar ... 31.2 4.3
tgo:TGME49_033930 poly(A)-specific ribonuclease, putative (EC:... 30.8 5.9
hsa:64800 EFCAB6, DJBP, FLJ23588, HSCBCIP1, KIAA1672, dJ185D5.... 30.4 6.9
> tgo:TGME49_060240 CCR4-NOT transcription complex subunit, putative
(EC:3.1.13.4); K12581 CCR4-NOT transcription complex
subunit 7/8
Length=617
Score = 448 bits (1152), Expect = 1e-125, Method: Compositional matrix adjust.
Identities = 212/264 (80%), Positives = 229/264 (86%), Gaps = 1/264 (0%)
Query 11 MNGYGDGLRGQIIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTSNALDYNYR 70
MNG G R QI+EVW HNLEEE RIRDVVER+ YIA+DTEFPGIVARPT N DYNY+
Sbjct 1 MNGE-CGEREQIVEVWEHNLEEEFARIRDVVERFQYIAMDTEFPGIVARPTGNVTDYNYQ 59
Query 71 TVKYNVDLLKVIQLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDF 130
TVKYNVDLLKVIQLG+TFAD+ G LAEGT TWQFNFRFDLNEDMYAQ+SIDFLKQSGIDF
Sbjct 60 TVKYNVDLLKVIQLGITFADADGNLAEGTSTWQFNFRFDLNEDMYAQDSIDFLKQSGIDF 119
Query 131 DKQQKKGVEVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFE 190
DKQQKKG++V DFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTC LP SE FFE
Sbjct 120 DKQQKKGIDVQDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCAPLPHSEAQFFE 179
Query 191 LVQDFFPSLYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFF 250
L+ DFFPSLYDIK+LLR + NFNLS G SLQK++E L V R+GPQHQAGSDSLVTCRTFF
Sbjct 180 LLHDFFPSLYDIKYLLRSIHNFNLSGGCSLQKIAEHLQVTRVGPQHQAGSDSLVTCRTFF 239
Query 251 NLVESYFDGKIDEAKFSGVIYGLG 274
LVE YFD ID+ +SGVIYGLG
Sbjct 240 KLVELYFDSSIDDCGYSGVIYGLG 263
> pfa:MAL8P1.104 CAF1 family ribonuclease, putative; K12581 CCR4-NOT
transcription complex subunit 7/8
Length=1774
Score = 381 bits (979), Expect = 1e-105, Method: Composition-based stats.
Identities = 180/256 (70%), Positives = 219/256 (85%), Gaps = 1/256 (0%)
Query 19 RGQIIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTSNALDYNYRTVKYNVDL 78
R +I++VWA+NLEEE +RIRD+VE++PY+A+DTEFPGIVARPT N LDYNY+T+K NVDL
Sbjct 4 RTKIVDVWANNLEEEFERIRDIVEKHPYVAIDTEFPGIVARPTGNVLDYNYQTIKCNVDL 63
Query 79 LKVIQLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKKGV 138
LKVIQLG+TF++ +G + TWQFNF+FDL+ DMYAQNSIDFLK SGI+F+K Q G+
Sbjct 64 LKVIQLGVTFSNGKGEMPN-VSTWQFNFKFDLDSDMYAQNSIDFLKLSGINFEKHQSLGI 122
Query 139 EVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFFPS 198
E+ FGE+IM+SGLVMNEDVKWISFHGCYDF YLLK+LTC ALP +E AFFEL+ DFFPS
Sbjct 123 ELLHFGEVIMSSGLVMNEDVKWISFHGCYDFAYLLKILTCSALPHNEAAFFELLNDFFPS 182
Query 199 LYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESYFD 258
LYDIK+LL +L LS+ SLQK+SE L+V+RIG QHQAGSDSLVTC+TFF L+E YFD
Sbjct 183 LYDIKYLLLNLNIKQLSRTFSLQKISEILSVKRIGRQHQAGSDSLVTCKTFFKLMEMYFD 242
Query 259 GKIDEAKFSGVIYGLG 274
KID+ K+SG+IYGLG
Sbjct 243 NKIDDKKYSGIIYGLG 258
> bbo:BBOV_III006830 17.m07605; CAF1 family ribonuclease containing
protein; K12581 CCR4-NOT transcription complex subunit
7/8
Length=374
Score = 363 bits (931), Expect = 4e-100, Method: Compositional matrix adjust.
Identities = 166/254 (65%), Positives = 212/254 (83%), Gaps = 1/254 (0%)
Query 21 QIIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTSNALDYNYRTVKYNVDLLK 80
+I++VW+ NLE+ +RIRDV+ERYPY+++DTEFPGIVA+PT+ DYNY+TVK NVDLLK
Sbjct 6 KIVDVWSDNLEDAFERIRDVLERYPYVSIDTEFPGIVAKPTTYQEDYNYQTVKCNVDLLK 65
Query 81 VIQLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKKGVEV 140
+IQLGLTFAD+ G+ G TWQFNF+FDL DMYA +SI+ LKQSGIDF+K Q+KG++V
Sbjct 66 LIQLGLTFADADGQTPSGVSTWQFNFKFDLQRDMYAYDSIELLKQSGIDFEKHQRKGIDV 125
Query 141 HDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFFPSLY 200
FGELI+ SGLVMNEDV W+SFHG YDF Y+LKLLTC LP +++ FF+L+ DFFPSLY
Sbjct 126 AHFGELIIASGLVMNEDVVWVSFHGSYDFAYVLKLLTCTTLPTNQSDFFDLLHDFFPSLY 185
Query 201 DIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESYFDGK 260
DIK+LL D + L+ SSLQ+++E L+V+RIGPQHQAGSDSLVTCRTFF L++ YF+ K
Sbjct 186 DIKYLL-DERSIKLTSRSSLQRIAEHLDVKRIGPQHQAGSDSLVTCRTFFKLMQRYFENK 244
Query 261 IDEAKFSGVIYGLG 274
+D+ K+ G+IYGLG
Sbjct 245 LDDEKYQGIIYGLG 258
> tpv:TP04_0580 hypothetical protein; K12581 CCR4-NOT transcription
complex subunit 7/8
Length=562
Score = 350 bits (898), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 165/254 (64%), Positives = 206/254 (81%), Gaps = 1/254 (0%)
Query 21 QIIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTSNALDYNYRTVKYNVDLLK 80
QI++VW+ NLE+ DRIRD++E+YPY+++DTEFPGIV RPTS DYNY+TVK NVDLL
Sbjct 6 QIVDVWSDNLEDAFDRIRDLLEQYPYVSIDTEFPGIVVRPTSYLEDYNYQTVKCNVDLLN 65
Query 81 VIQLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKKGVEV 140
+IQLGLTFADS G TWQFNF+FDL+ DMYAQNSID LK SGIDF+ Q++G+++
Sbjct 66 IIQLGLTFADSDGSSPNSASTWQFNFKFDLHHDMYAQNSIDLLKNSGIDFESHQRRGIDL 125
Query 141 HDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFFPSLY 200
FGELIM+SGLVMNE++ WISFHG YDF YLLKLLTC LP +++ FFEL+ DFFPSLY
Sbjct 126 VHFGELIMSSGLVMNEEIVWISFHGSYDFAYLLKLLTCTNLPSNQSLFFELLHDFFPSLY 185
Query 201 DIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESYFDGK 260
DIKFLL D + LS SLQK+++ L+V+R+G QHQAGSDSLVT RTFF L++ YF+ K
Sbjct 186 DIKFLL-DERSIELSGRLSLQKLADHLDVKRVGLQHQAGSDSLVTSRTFFKLMQRYFENK 244
Query 261 IDEAKFSGVIYGLG 274
+D+ K+ G+IYGLG
Sbjct 245 LDDQKYQGIIYGLG 258
> mmu:18983 Cnot7, AU022737, Caf1, Pop2; CCR4-NOT transcription
complex, subunit 7; K12581 CCR4-NOT transcription complex
subunit 7/8
Length=285
Score = 297 bits (760), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/258 (55%), Positives = 190/258 (73%), Gaps = 9/258 (3%)
Query 21 QIIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPT----SNALDYNYRTVKYNV 76
+I EVWA NL+EE+ +IR V+ +Y Y+A+DTEFPG+VARP SNA DY Y+ ++ NV
Sbjct 11 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNA-DYQYQLLRCNV 69
Query 77 DLLKVIQLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKK 136
DLLK+IQLGLTF + +G GT TWQFNF+F+L EDMYAQ+SI+ L SGI F K +++
Sbjct 70 DLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEE 129
Query 137 GVEVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFF 196
G+E F EL+M SG+V+ E VKW+SFH YDFGYL+K+LT LPE E FFE+++ FF
Sbjct 130 GIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF 189
Query 197 PSLYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESY 256
P +YD+K+L++ N LQ+V+EQL +ERIGPQHQAGSDSL+T FF + E +
Sbjct 190 PVIYDVKYLMKSCKNLK----GGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMF 245
Query 257 FDGKIDEAKFSGVIYGLG 274
F+ ID+AK+ G +YGLG
Sbjct 246 FEDHIDDAKYCGHLYGLG 263
> hsa:29883 CNOT7, CAF1, hCAF-1; CCR4-NOT transcription complex,
subunit 7; K12581 CCR4-NOT transcription complex subunit
7/8
Length=285
Score = 297 bits (760), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/258 (55%), Positives = 190/258 (73%), Gaps = 9/258 (3%)
Query 21 QIIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPT----SNALDYNYRTVKYNV 76
+I EVWA NL+EE+ +IR V+ +Y Y+A+DTEFPG+VARP SNA DY Y+ ++ NV
Sbjct 11 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNA-DYQYQLLRCNV 69
Query 77 DLLKVIQLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKK 136
DLLK+IQLGLTF + +G GT TWQFNF+F+L EDMYAQ+SI+ L SGI F K +++
Sbjct 70 DLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEE 129
Query 137 GVEVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFF 196
G+E F EL+M SG+V+ E VKW+SFH YDFGYL+K+LT LPE E FFE+++ FF
Sbjct 130 GIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF 189
Query 197 PSLYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESY 256
P +YD+K+L++ N LQ+V+EQL +ERIGPQHQAGSDSL+T FF + E +
Sbjct 190 PVIYDVKYLMKSCKNLK----GGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMF 245
Query 257 FDGKIDEAKFSGVIYGLG 274
F+ ID+AK+ G +YGLG
Sbjct 246 FEDHIDDAKYCGHLYGLG 263
> xla:734751 cnot7, MGC130876, caf1; CCR4-NOT transcription complex,
subunit 7; K12581 CCR4-NOT transcription complex subunit
7/8
Length=285
Score = 295 bits (756), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/258 (55%), Positives = 189/258 (73%), Gaps = 9/258 (3%)
Query 21 QIIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPT----SNALDYNYRTVKYNV 76
+I EVWA NL++++ RIR V+ +Y Y+A+DTEFPG+VARP SNA DY Y+ ++ NV
Sbjct 11 RICEVWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNA-DYQYQLLRCNV 69
Query 77 DLLKVIQLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKK 136
DLLK+IQLGLTF + +G GT TWQFNF+F+L EDMYAQ+SI+ L SGI F K +++
Sbjct 70 DLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTSSGIQFKKHEEE 129
Query 137 GVEVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFF 196
G+E F EL M SG+V+ E VKW+SFH YDFGYL+K+LT LPE E FFE+++ FF
Sbjct 130 GIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEVEQDFFEILRLFF 189
Query 197 PSLYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESY 256
P +YD+K+L++ N LQ+V+EQL +ERIGPQHQAGSDSL+T FF + E +
Sbjct 190 PVIYDVKYLMKSCKNLK----GGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMF 245
Query 257 FDGKIDEAKFSGVIYGLG 274
F+ ID+AK+ G +YGLG
Sbjct 246 FEDHIDDAKYCGHLYGLG 263
> dre:768119 cnot7, CAF1, fd59c07, fj07d05, wu:fd59c07, wu:fj07d05,
zgc:153168; CCR4-NOT transcription complex, subunit 7;
K12581 CCR4-NOT transcription complex subunit 7/8
Length=286
Score = 295 bits (755), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/258 (55%), Positives = 189/258 (73%), Gaps = 9/258 (3%)
Query 21 QIIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPT----SNALDYNYRTVKYNV 76
+I EVWA NLEEE+ RIR V ++ YIA+DTEFPG+VARP SNA DY Y+ ++ NV
Sbjct 11 RICEVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGEFRSNA-DYQYQLLRCNV 69
Query 77 DLLKVIQLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKK 136
DLLK+IQLGLTF + +G GT TWQFNF+F+L EDMYAQ+SI+ L SGI F K +++
Sbjct 70 DLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTSSGIQFKKHEEE 129
Query 137 GVEVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFF 196
G+E F EL+M SG+V+ E VKW+SFH YDFGYL+K+L+ LP+ E FFE+++ FF
Sbjct 130 GIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLPDEEVDFFEILRLFF 189
Query 197 PSLYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESY 256
P +YD+K+L++ N LQ+V+EQL +ERIGPQHQAGSDSL+T FF + E +
Sbjct 190 PIIYDVKYLMKSCKNLK----GGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMF 245
Query 257 FDGKIDEAKFSGVIYGLG 274
F+ ID+AK+ G +YGLG
Sbjct 246 FEDHIDDAKYCGHLYGLG 263
> hsa:9337 CNOT8, CAF1, CALIF, POP2, hCAF1; CCR4-NOT transcription
complex, subunit 8; K12581 CCR4-NOT transcription complex
subunit 7/8
Length=292
Score = 288 bits (738), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 134/256 (52%), Positives = 188/256 (73%), Gaps = 7/256 (2%)
Query 22 IIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTS---NALDYNYRTVKYNVDL 78
I EVWA NLEEE+ +IR++V Y YIA+DTEFPG+V RP +++DY Y+ ++ NVDL
Sbjct 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query 79 LKVIQLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKKGV 138
LK+IQLGLTF + +G G TWQFNF+F+L EDMY+Q+SID L SG+ F K +++G+
Sbjct 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGI 131
Query 139 EVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFFPS 198
+ F EL+M SG+V+ ++VKW+SFH YDFGY++KLLT LPE E+ FF ++ FFPS
Sbjct 132 DTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPS 191
Query 199 LYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESYFD 258
+YD+K+L++ N LQ+V++QL+++RIG QHQAGSDSL+T FF + E +F+
Sbjct 192 IYDVKYLMKSCKNLK----GGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKELFFE 247
Query 259 GKIDEAKFSGVIYGLG 274
ID+AK+ G +YGLG
Sbjct 248 DSIDDAKYCGRLYGLG 263
> mmu:69125 Cnot8, 1500015I04Rik, 1810022F04Rik, AA536816, AU015770,
AU043059; CCR4-NOT transcription complex, subunit 8;
K12581 CCR4-NOT transcription complex subunit 7/8
Length=292
Score = 288 bits (737), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 134/256 (52%), Positives = 188/256 (73%), Gaps = 7/256 (2%)
Query 22 IIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTS---NALDYNYRTVKYNVDL 78
I EVWA NLEEE+ +IR++V Y YIA+DTEFPG+V RP +++DY Y+ ++ NVDL
Sbjct 12 ICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDL 71
Query 79 LKVIQLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKKGV 138
LK+IQLGLTF + +G G TWQFNF+F+L EDMY+Q+SID L SG+ F K +++G+
Sbjct 72 LKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGI 131
Query 139 EVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFFPS 198
+ F EL+M SG+V+ ++VKW+SFH YDFGY++KLLT LPE E+ FF ++ FFPS
Sbjct 132 DTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPS 191
Query 199 LYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESYFD 258
+YD+K+L++ N LQ+V++QL+++RIG QHQAGSDSL+T FF + E +F+
Sbjct 192 IYDVKYLMKSCKNLK----GGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKELFFE 247
Query 259 GKIDEAKFSGVIYGLG 274
ID+AK+ G +YGLG
Sbjct 248 DSIDDAKYCGRLYGLG 263
> dre:406788 cnot8, wu:fe49a05, zgc:63844; CCR4-NOT transcription
complex, subunit 8; K12581 CCR4-NOT transcription complex
subunit 7/8
Length=285
Score = 286 bits (733), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 134/256 (52%), Positives = 188/256 (73%), Gaps = 7/256 (2%)
Query 22 IIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTS---NALDYNYRTVKYNVDL 78
I EVWA N+EEE+ +IR +++ Y YIA+DTEFPG+V RP + +DY Y+ ++ NVDL
Sbjct 12 ICEVWASNVEEEMRKIRQIIQNYNYIAMDTEFPGVVVRPIGEFRSTVDYQYQLLRCNVDL 71
Query 79 LKVIQLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKKGV 138
LK++QLGLTF + G GT TWQFNF+F+L EDMY+Q+SID L+ SG+ F K +++G+
Sbjct 72 LKIVQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSGLQFKKHEEEGI 131
Query 139 EVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFFPS 198
+ F EL+M SGLV+ E+VKW+SFH YDFGYL+KLLT LPE E+ FF+++ FFP+
Sbjct 132 DTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDSRLPEEEHEFFQILNLFFPA 191
Query 199 LYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESYFD 258
+YD+K+L++ N LQ+V++QL ++RIG QHQAGSDSL+T FF + E +F+
Sbjct 192 IYDVKYLMKSCKNLK----GGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFRMKELFFE 247
Query 259 GKIDEAKFSGVIYGLG 274
ID+AK+ G +YGLG
Sbjct 248 DNIDDAKYCGRLYGLG 263
> xla:379811 cnot8, MGC52767; CCR4-NOT transcription complex,
subunit 8; K12581 CCR4-NOT transcription complex subunit 7/8
Length=289
Score = 283 bits (725), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 133/256 (51%), Positives = 187/256 (73%), Gaps = 7/256 (2%)
Query 22 IIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTS---NALDYNYRTVKYNVDL 78
I EVWA NLEEE+ +IR++V + YIA+DTEFPG+V RP + +DY Y+ ++ NVDL
Sbjct 12 ICEVWAVNLEEEMRKIRELVRTHGYIAMDTEFPGVVVRPIGEFRSTIDYQYQLLRCNVDL 71
Query 79 LKVIQLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKKGV 138
LK+IQLGLTF + +G G TWQFNF+F+L EDMY+Q+SID L SG+ F K +++G+
Sbjct 72 LKIIQLGLTFTNEKGEYPPGINTWQFNFKFNLTEDMYSQDSIDLLANSGLQFQKHEEEGI 131
Query 139 EVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFFPS 198
+ F EL+M SG+V+ ++VKW+SFH YDFGY++KLLT LPE E+ FF ++ FFPS
Sbjct 132 DTLTFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFFPS 191
Query 199 LYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESYFD 258
+YD+K+L++ N LQ+V++QL+++RIG QHQAGSDSL+T FF + E +F+
Sbjct 192 IYDVKYLMKSCKNLK----GGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFRMKELFFE 247
Query 259 GKIDEAKFSGVIYGLG 274
ID+AK+ G +YGLG
Sbjct 248 DHIDDAKYCGRLYGLG 263
> ath:AT1G80780 CCR4-NOT transcription complex protein, putative;
K12581 CCR4-NOT transcription complex subunit 7/8
Length=274
Score = 274 bits (701), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/263 (55%), Positives = 192/263 (73%), Gaps = 16/263 (6%)
Query 21 QIIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPT----SNALDYNYRTVKYNV 76
QI EVW NL+EE+D IRDVV+ +PY+A+DTEFPGIV RP SNA DY+Y T+K NV
Sbjct 11 QIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNA-DYHYETLKTNV 69
Query 77 DLLKVIQLGLTFADSRGRLAE-GT---CTWQFNFR-FDLNEDMYAQNSIDFLKQSGIDFD 131
++LK+IQLGLTF++ +G L GT C WQFNFR FDL+ D++A +SI+ LKQSGID
Sbjct 70 NILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLA 129
Query 132 KQQKKGVEVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFEL 191
K G++ F EL+M+SG+V+NE+V W++FH YDFGYLLKLLTC+ LP+S+ FF+L
Sbjct 130 KNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKL 189
Query 192 VQDFFPSLYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFN 251
+ +FP++YDIK L++ F S L K++E L VER+G HQAGSDSL+T TF
Sbjct 190 INVYFPTVYDIKHLMK----FCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRK 245
Query 252 LVESYFDGKIDEAKFSGVIYGLG 274
L E++F G + K+SGV+YGLG
Sbjct 246 LKENFFVGPL--HKYSGVLYGLG 266
> ath:AT2G32070 CCR4-NOT transcription complex protein, putative
Length=275
Score = 271 bits (694), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/263 (53%), Positives = 189/263 (71%), Gaps = 15/263 (5%)
Query 21 QIIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPT---SNALDYNYRTVKYNVD 77
QI EVW NLE E+ IR+VV+ +P++A+DTEFPGIV RP +Y+Y T+K NV+
Sbjct 11 QIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEYHYETLKTNVN 70
Query 78 LLKVIQLGLTFADSRGRLAE-GT----CTWQFNFR-FDLNEDMYAQNSIDFLKQSGIDFD 131
+LK+IQLGLTF+D +G L GT C WQFNFR FDL D+YA +SI+ L+QSGIDF
Sbjct 71 ILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFV 130
Query 132 KQQKKGVEVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFEL 191
K + G++ F EL+M+SG+V+NE+V W++FH YDFGYLLKLLTC+ LPE++ FFE+
Sbjct 131 KNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEM 190
Query 192 VQDFFPSLYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFN 251
+ +FP +YDIK L++ F S L K++E L+VER+G HQAGSDSL+T TF
Sbjct 191 ISVYFPRVYDIKHLMK----FCNSLHGGLNKLAELLDVERVGICHQAGSDSLLTSCTFRK 246
Query 252 LVESYFDGKIDEAKFSGVIYGLG 274
L E++F G ++ K+SGV+YGLG
Sbjct 247 LQENFFIGSME--KYSGVLYGLG 267
> cpv:cgd3_350 Pop2p-like 3'5' exonuclease, CCR4-NOT transcription
complex ; K12581 CCR4-NOT transcription complex subunit
7/8
Length=277
Score = 268 bits (686), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/257 (52%), Positives = 189/257 (73%), Gaps = 3/257 (1%)
Query 19 RGQIIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTSNALDYNYRTVKYNVDL 78
+G I EVW +N+ E I ++++ +PY+A+DTEFPG+V RPT+N +Y Y+TV++NVDL
Sbjct 15 KGVIYEVWQNNINEAFQMISEIMDDFPYVAIDTEFPGVVVRPTNNYYEYYYQTVRFNVDL 74
Query 79 LKVIQLGLTFADSRGRLAEGTC-TWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKKG 137
LKVIQ+GL+F + G+ C T+QFNF+FD+ D+Y+Q SI FL+ SGI+FDK G
Sbjct 75 LKVIQIGLSFRNKYGQAPTNICSTFQFNFKFDMECDIYSQESIQFLRHSGIEFDKHLNSG 134
Query 138 VEVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFFP 197
++ FGE + SGLV+N VKWISFHGCYDF YL+K+L+ + LPE+E F ELV+ FP
Sbjct 135 IDFLCFGEYMYGSGLVLNPKVKWISFHGCYDFAYLVKILSSQPLPETETNFIELVKALFP 194
Query 198 SLYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESYF 257
+LYD+KF+L+ L +LS SSLQK+SE L ++RIG HQAGSD+LVTC TFF L + +
Sbjct 195 TLYDLKFILKQL--SSLSHLSSLQKLSEHLKIQRIGIAHQAGSDALVTCCTFFKLFKLHL 252
Query 258 DGKIDEAKFSGVIYGLG 274
+ ++D+ F+G IYG G
Sbjct 253 NSQVDDNLFNGQIYGFG 269
> dre:100334227 CCR4-NOT transcription complex, subunit 8-like
Length=247
Score = 266 bits (680), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 126/240 (52%), Positives = 174/240 (72%), Gaps = 7/240 (2%)
Query 22 IIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTS---NALDYNYRTVKYNVDL 78
I EVWA N+EEE+ +IR +++ Y YIA+DTEFPG+V RP + +DY Y+ ++ NVDL
Sbjct 12 ICEVWASNVEEEMRKIRQIIQNYNYIAMDTEFPGVVVRPIGEFRSTVDYQYQLLRCNVDL 71
Query 79 LKVIQLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKKGV 138
LK+IQLGLTF + G GT TWQFNF+F+L EDMY+Q+SID L+ SG+ F K +++G+
Sbjct 72 LKIIQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSGLQFKKHEEEGI 131
Query 139 EVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFFPS 198
+ F EL+M SGLV+ E+VKW+SFH YDFGYL+KLLT LPE E+ FF+++ FFP+
Sbjct 132 DTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDSRLPEEEHEFFQILNLFFPA 191
Query 199 LYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESYFD 258
+YD+K+L++ N LQ+V++QL ++RIG QHQAGSDSL+T FF + E D
Sbjct 192 IYDVKYLMKSCKNLK----GGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFRMKEVCID 247
> ath:AT5G10960 CCR4-NOT transcription complex protein, putative;
K12581 CCR4-NOT transcription complex subunit 7/8
Length=277
Score = 258 bits (660), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/262 (51%), Positives = 184/262 (70%), Gaps = 14/262 (5%)
Query 21 QIIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTSNAL---DYNYRTVKYNVD 77
I EVW +NL EE IR++V+++ YIA+DTEFPG+V +P + D NYRT+K NVD
Sbjct 11 MIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTLKENVD 70
Query 78 LLKVIQLGLTFADSRGRLAE-GT---CTWQFNFR-FDLNEDMYAQNSIDFLKQSGIDFDK 132
LLK+IQ+GLTF+D G L GT C WQFNFR F++ ED+YA SI+ L+Q GIDF K
Sbjct 71 LLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCGIDFKK 130
Query 133 QQKKGVEVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELV 192
+KG++V FGEL+M+SG+V+N+ + W++FHG YDFGYL+KLLTC+ LP + FF+L+
Sbjct 131 NIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLL 190
Query 193 QDFFPSLYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNL 252
+FP++YDIK L+ F L +++E + VER+G HQAGSDSL+T +F L
Sbjct 191 YVYFPTVYDIKHLM----TFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRKL 246
Query 253 VESYFDGKIDEAKFSGVIYGLG 274
E YF G + K++GV+YGLG
Sbjct 247 KERYFPGSTE--KYTGVLYGLG 266
> ath:AT1G15920 CCR4-NOT transcription complex protein, putative
Length=286
Score = 240 bits (612), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 180/267 (67%), Gaps = 20/267 (7%)
Query 21 QIIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVAR---------PTSNALDYNYRT 71
+I EVW HNLE+E+ I ++ +PY+A+DTEFPGIV + P S +YNY T
Sbjct 15 EIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDT 74
Query 72 VKYNVDLLKVIQLGLTFADSRGRLAE-GT---CTWQFNFR-FDLNEDMYAQNSIDFLKQS 126
+K NV++LK+IQLGLT +D +G L GT C WQFNFR F++ DM+A +SI+ L++S
Sbjct 75 LKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKS 134
Query 127 GIDFDKQQKKGVEVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESEN 186
ID +K + GV+ F EL+M SG+V+N+ + W++FH YDFGYLLKLL+ + LPE +
Sbjct 135 AIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEIS 194
Query 187 AFFELVQDFFPSLYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTC 246
FF+ ++ FFP +YDIK+L+ F + L+K++E L V+R+G HQAGSDSL+T
Sbjct 195 DFFDQMEKFFPVVYDIKYLM----GFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTL 250
Query 247 RTFFNLVESYFDGKIDEAKFSGVIYGL 273
RTF + E +F G + K+SG ++GL
Sbjct 251 RTFIKMKEFFFTGSL--LKYSGFLFGL 275
> cel:Y56A3A.20 ccf-1; yeast CCR4 Associated Factor family member
(ccf-1); K12581 CCR4-NOT transcription complex subunit 7/8
Length=310
Score = 218 bits (555), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/259 (42%), Positives = 160/259 (61%), Gaps = 5/259 (1%)
Query 21 QIIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTS---NALDYNYRTVKYNVD 77
+I V+ N+EEE RIR VE YPY+A+DTEFPG+VA P + D+NY+ V NV+
Sbjct 22 KIHNVYMSNVEEEFARIRGFVEDYPYVAMDTEFPGVVATPLGTFRSKEDFNYQQVFCNVN 81
Query 78 LLKVIQLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKKG 137
+LK+IQ+G + +G L WQFNF F EDM++ S++ L+Q+GIDF Q G
Sbjct 82 MLKLIQVGFAMVNDKGELPPTGDVWQFNFNFSFAEDMFSHESVEMLRQAGIDFTLLQNNG 141
Query 138 VEVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFFP 197
+ FGEL+ SGL+ + + W++F YDFGYLLK +T LP+ E+ FF + FP
Sbjct 142 IPTAVFGELLTTSGLITDPRITWLTFSSGYDFGYLLKSITLGDLPKEESTFFMCHKTLFP 201
Query 198 SLYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESYF 257
+ +DIK LLR + LQ+V++QL+V+R G +HQAGSD+L+T TFF + + +F
Sbjct 202 TSFDIKILLRTPNCASAKLKGGLQEVADQLDVKRQGVRHQAGSDALLTAATFFKIKKQFF 261
Query 258 DGKIDEAK--FSGVIYGLG 274
++ G ++GLG
Sbjct 262 GDNWNQIAPLICGHMFGLG 280
> ath:AT5G22250 CCR4-NOT transcription complex protein, putative
Length=278
Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/268 (43%), Positives = 169/268 (63%), Gaps = 22/268 (8%)
Query 22 IIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTSNAL-----DYNYRTVKYNV 76
I +VWA+NLE E D IR +VE YP+I++DTEFPG++ + + L +Y Y +K NV
Sbjct 14 IRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNPNYLYNLLKSNV 73
Query 77 DLLKVIQLGLTFADSRGRLAE------GTCTWQFNFR-FDLNEDMYAQNSIDFLKQSGID 129
D L +IQ+GLT +D+ G L + W+FNFR FD+ D +A +SI+ L++ GID
Sbjct 74 DALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRHGID 133
Query 130 FDKQQKKGVEVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFF 189
F++ +++GVE F EL+M+SGL+ NE V W++FH YDFGYL+K+LT LP + F
Sbjct 134 FERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALREFL 193
Query 190 ELVQDFF-PSLYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVER-IGPQHQAGSDSLVTCR 247
L++ FF +YD+K ++R L G L +V+ L V R +G HQAGSDSL+T +
Sbjct 194 GLLRAFFGDRVYDVKHIMR-FCEQRLYGG--LDRVARSLEVNRAVGKCHQAGSDSLLTWQ 250
Query 248 TFFNLVESYF--DGKIDEAKFSGVIYGL 273
F + + YF DG K +GV+YGL
Sbjct 251 AFQRMRDLYFVEDGA---EKHAGVLYGL 275
> ath:AT3G44260 CCR4-NOT transcription complex protein, putative
Length=280
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 165/272 (60%), Gaps = 21/272 (7%)
Query 16 DGLRGQIIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPT---SNALDYNYRTV 72
DG+ EVWA NLE E + I ++++ YP+I++DTEFPG++ + +N D Y +
Sbjct 13 DGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDL-YTLL 71
Query 73 KYNVDLLKVIQLGLTFADSRGRLAE------GTCTWQFNFR-FDLNEDMYAQNSIDFLKQ 125
K NVD L +IQ+GLT +D G L + W+FNFR FD+ D +A +SI+ L++
Sbjct 72 KANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRR 131
Query 126 SGIDFDKQQKKGVEVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESE 185
GIDF++ + GVE F EL+M+SGLV NE+V W++FH YDFGYL+K+LT LP +
Sbjct 132 QGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGAL 191
Query 186 NAFFELVQDFF-PSLYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVER-IGPQHQAGSDSL 243
F +++ F +YD+K +++ L G L +V+ L V R +G HQAGSDSL
Sbjct 192 GEFKRVMRVLFGERVYDVKHMMK-FCERRLFGG--LDRVARTLEVNRAVGKCHQAGSDSL 248
Query 244 VTCRTFFNLVESYF--DGKIDEAKFSGVIYGL 273
+T F + + YF DG K +GV+YGL
Sbjct 249 LTWHAFQRMRDLYFVQDGP---EKHAGVLYGL 277
> sce:YNR052C POP2, CAF1; Pop2p (EC:3.1.13.4); K12581 CCR4-NOT
transcription complex subunit 7/8
Length=433
Score = 172 bits (437), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 156/270 (57%), Gaps = 18/270 (6%)
Query 22 IIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTS---NALDYNYRTVKYNVDL 78
+ +VW NL E IR +V +Y ++++ TEF G +ARP + +DY+Y+T++ NVD
Sbjct 160 VRDVWKSNLYSEFAVIRQLVSQYNHVSISTEFVGTLARPIGTFRSKVDYHYQTMRANVDF 219
Query 79 LKVIQLGLTFADSRGRLAE-GTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKKG 137
L IQLGL+ +D+ G + G TWQFNF FD +++ + S++ L++SGI+F+K + G
Sbjct 220 LNPIQLGLSLSDANGNKPDNGPSTWQFNFEFDPKKEIMSTESLELLRKSGINFEKHENLG 279
Query 138 VEVHDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFFP 197
++V +F +L+M+SGL+M++ V WI++H YD G+L+ +L +++P ++ F V + P
Sbjct 280 IDVFEFSQLLMDSGLMMDDSVTWITYHAAYDLGFLINILMNDSMPNNKEDFEWWVHQYMP 339
Query 198 SLYDIKFLLRDLPNFN-----------LSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTC 246
+ YD+ + + + F Q SL ++++L + R G SL+
Sbjct 340 NFYDLNLVYKIIQEFKNPQLQQSSQQQQQQQYSLTTLADELGLPRFSIFTTTGGQSLLML 399
Query 247 RTFFNLVE---SYFDGKIDEAKFSGVIYGL 273
+F L + F D AK+ GVIYG+
Sbjct 400 LSFCQLSKLSMHKFPNGTDFAKYQGVIYGI 429
> ath:AT1G61470 CCR4-NOT transcription complex protein, putative
Length=278
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 132/238 (55%), Gaps = 20/238 (8%)
Query 24 EVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTSNALD-YNYRTVKYNVDLLKVI 82
EVW N + E++ IRD ++ IA+DTEFPG + +A D YR +K+NVD +I
Sbjct 4 EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63
Query 83 QLGLTFADSRGRLAEG-TCTWQFNFRFDLNEDMYAQN--SIDFLKQSGIDFDKQQKKGVE 139
QLGLT +G T TW+ N D NE +N SI FLK +G+D DK +++G+
Sbjct 64 QLGLTL------FGKGITKTWEINLS-DFNESKSLKNDKSIAFLKNNGLDLDKIREEGIG 116
Query 140 VHDFGELIMNSGLVMNED---VKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFF 196
+ +F M ++NE ++W++F G YD YLLK LT + LPE+ F E VQ
Sbjct 117 IEEF---FMEFSQILNEKHGKMRWVTFQGSYDKAYLLKGLTRKPLPETSKEFDETVQQLL 173
Query 197 PS-LYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLV 253
+YD+K + LS LQ++++ L + R+G H AGSDS +T R F L+
Sbjct 174 GRFVYDVKKMAGLCS--GLSSRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKLI 229
> ath:AT1G06450 CCR4-NOT transcription complex protein, putative
Length=360
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 136/253 (53%), Gaps = 12/253 (4%)
Query 25 VWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPT-SNALDYNYRTVKYNVDLLKVIQ 83
VW N++EE+ R+ + ++R+P IA DTE+PGI+ R ++ D YR +K NV+ K+IQ
Sbjct 12 VWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVENTKLIQ 71
Query 84 LGLTFADSRGRLAEGTCTWQFNF-RFDLNEDMYAQNSIDFLKQSGIDFDKQQKKGVEVHD 142
G T +++G + W+ NF F D + SI+FL++ G+D K + +GV++
Sbjct 72 CGFTLFNAKGEIGG---VWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVDMFG 128
Query 143 FGELI-MNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFFPSLYD 201
+G + + + V++++F G YDF Y L +L LPE+ F V F +YD
Sbjct 129 YGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILNHGKLPETHGEFATEVVKVFGQVYD 188
Query 202 IKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESYFDGKI 261
K + L + L K+++ L + R+G H AGSDSL+T F L Y D +
Sbjct 189 TKVMAGFCE--GLGEHLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVYEDSRF 246
Query 262 DEAKFSGVIYGLG 274
G+IYG+G
Sbjct 247 AR----GLIYGIG 255
> ath:AT1G27820 CCR4-NOT transcription complex protein, putative
Length=310
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 129/238 (54%), Gaps = 18/238 (7%)
Query 24 EVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVAR-PTSNALDYNYRTVKYNVDLLKVI 82
EVW N E E++ IRD ++ IA+DTEFPG + P + + YR +K+NVD +I
Sbjct 8 EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 67
Query 83 QLGLTFADSRGRLAEGTCTWQFNFR-FDLNEDMYAQNSIDFLKQSGIDFDKQQKKGVEV- 140
QLG T D RG TW+ N FD ++ SI FLK +G++ DK +++G+ +
Sbjct 68 QLGFTLFDRRGFAK----TWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGID 123
Query 141 ---HDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLT-CEALPESENAFFELVQDFF 196
DF +++ + + W++F G YD YL+K LT + LPE++ F E VQ
Sbjct 124 EFFRDFSQILTEK----DGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLL 179
Query 197 PS-LYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLV 253
++D+K + LS LQ++++ L ++R+G H AGSDS +T R F L
Sbjct 180 GKFVFDVKKIAESCS--GLSSQFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKLT 235
> ath:AT1G27890 CCR4-NOT transcription complex protein, putative
Length=302
Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 131/239 (54%), Gaps = 20/239 (8%)
Query 24 EVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVAR-PTSNALDYNYRTVKYNVDLLKVI 82
EVW N E E+D IRD ++ + IA+DTEFPG + P + + YR +K+NVD +I
Sbjct 3 EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 62
Query 83 QLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQN--SIDFLKQSGIDFDKQQKKGVEV 140
QLG T D RG T TW+ N D NE +N SI FLK +G++ DK ++G+ +
Sbjct 63 QLGFTLFDRRGI----TKTWEINLS-DFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGI 117
Query 141 ----HDFGELIMNSGLVMNEDVKWISFHGCYDFGYLLKLLT-CEALPESENAFFELVQDF 195
DF +++ + + W++F G YD YL+K LT + LPE++ F E V+
Sbjct 118 EEFFRDFSQILKEK----DGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQL 173
Query 196 FPS-LYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLV 253
++D+K + LS LQ++++ L ++R+G H AGSDS +T R F L
Sbjct 174 LGKFVFDVKKIAESCS--GLSSRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKLT 230
> ath:AT3G44240 CCR4-NOT transcription complex protein, putative
Length=239
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 117/221 (52%), Gaps = 6/221 (2%)
Query 37 IRDVVERYPYIALDTEFPGIVARPTSNALDY-NYRTVKYNVDLLKVIQLGLTFADSRGRL 95
I D + Y +IA+DTEFP + T +A D Y + ++VD K+IQLGLT D GR+
Sbjct 4 IEDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRI 63
Query 96 AEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKKGVEVHDFGELIMNSGLVMN 155
TW+ NF +D + SI+FL+++G+D K +++G+ + F +
Sbjct 64 G---GTWEINFSDFGVDDARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTR 120
Query 156 EDVKWISFHGCYDFGYLLKLLTCEALPESENAFFELVQDFFPSLYDIKFLLRDLPNFNLS 215
++ W++FHG YD YLLK T EALP + F + V S+YD+K + LS
Sbjct 121 RNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVMAGRCE--GLS 178
Query 216 QGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESY 256
L+ ++ + + R+G H AGS++ +T F ++ +
Sbjct 179 SRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPF 219
> dre:568260 si:dkey-40i22.3; K13202 target of EGR1 protein 1
Length=483
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 31/205 (15%)
Query 22 IIEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPT--SNALDYNYRTVKYNVDLL 79
+I+V +N +E + ++ +IA+DTE G+ +R + +++ Y + +
Sbjct 9 VIDVQGNNFKELWAAMVIAIKTSSFIAIDTELSGLGSRKALLAESIEDRYNAICHAARTR 68
Query 80 KVIQLGLTFADSRGRLAEGTCTWQ-FNFRFDLNED-MYAQNSIDFLKQSGIDFDKQQKKG 137
V+ LG AE T Q +N +E+ + S+ FL Q G DF+KQ +G
Sbjct 69 SVLSLGFACYKELENKAETTYLVQVYNLTLLCSEEYIIEPQSVQFLVQHGFDFNKQYAEG 128
Query 138 VEVHD----------------FGELI-MNSGLVMNEDVKWISFHGCYDFGYLLKLLTCEA 180
+ + F EL+ N LV++ +G D +L +
Sbjct 129 IPYYKGNDKGGDAHGVNIRSLFVELLRANKPLVLH--------NGLIDLVFLYQCFYAH- 179
Query 181 LPESENAFFELVQDFFPS-LYDIKF 204
LP+ F + FPS +YD K+
Sbjct 180 LPDRLGTFTADLSQMFPSGIYDTKY 204
> tpv:TP04_0261 hypothetical protein; K13202 target of EGR1 protein
1
Length=277
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query 32 EELDRIRDVVERYPYIALDTEFPGIVARPTS-NALDYNYRTVKYNVDLLKVIQLGLTFA- 89
+LD I D + +I +D EF GI + S LD ++K +V+ ++Q+G A
Sbjct 9 SDLDSILDKIPNSKFIVIDCEFSGINPKSKSIRTLDDYLLSLKDDVEEYALLQIGFCLAM 68
Query 90 DSRGRLAEGTCTWQ------FNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKKGVEVHDF 143
+S+ E WQ + ++ ++ S+ +L+ +G DK +G++
Sbjct 69 NSQNSEQE---LWQLYPYSFYTLSSEITNTIFLNESMKWLRDNGFSLDKWIDQGMDFKRL 125
Query 144 GELIMNSG 151
G+ NSG
Sbjct 126 GDRYYNSG 133
> dre:791461 parn, MGC56067, zgc:56067; poly(A)-specific ribonuclease
(deadenylation nuclease) (EC:3.1.13.4); K01148 poly(A)-specific
ribonuclease [EC:3.1.13.4]
Length=647
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 35/141 (24%)
Query 23 IEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTSNALDYNYRTVKYNVDLLKVI 82
+EV N +E L + + V+ +I++D EF GI P+ +AL T + L+
Sbjct 1 MEVTRQNFKEVLPEVCNAVQEADFISIDGEFTGISDGPSVSALTNGLDTPEERYTKLRKH 60
Query 83 QLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMY-------------------------AQ 117
+ G CT FR+D N+ Y
Sbjct 61 SMNFLL------FQFGVCT----FRYDQNQSTYITKAFNFYIFPKPFSRTSPDIKFICQS 110
Query 118 NSIDFLKQSGIDFDKQQKKGV 138
+SIDFL G DF+K + G+
Sbjct 111 SSIDFLASQGFDFNKVFRSGI 131
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 18/94 (19%)
Query 178 CEALPESENAFFELVQDFFPSLYDIKFLLRDLPNFNLSQGSSLQKVSEQLNVERIGPQ-- 235
C LPE + F E+ FP L D K + P + +SL ++ +QL + P
Sbjct 299 CGPLPEELDDFKEVAMTVFPRLLDTKLMASTQPFKEIIHNTSLAELHKQLRQKPFRPPTT 358
Query 236 ----------------HQAGSDSLVTCRTFFNLV 253
H+AG D+ +T F ++
Sbjct 359 ECPEGLQSYDTSTEQLHEAGYDAFITGLCFISMA 392
> sce:YJL207C LAA1; AP-1 accessory protein; colocalizes with clathrin
to the late-Golgi apparatus; involved in TGN-endosome
transport; physically interacts with AP-1; similar to the
mammalian p200; may interact with ribosomes; YJL207C is a non-essential
gene
Length=2014
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query 202 IKFLLRDL-PNFNLSQGSSLQKVSEQLNVERIGPQHQAGSDSLVTCRTFFNLVESYFDGK 260
IK +D+ N +LSQ S K+ Q + E I HQ S S+ C +FF S + K
Sbjct 1893 IKRFFQDIQTNDSLSQASIKTKLIIQFSEEVIKQDHQKASLSIALCLSFFAAYHSAYTEK 1952
Query 261 IDEAKFSGVI 270
ID SG++
Sbjct 1953 IDNEVASGIV 1962
> mmu:240023 Pnldc1, FLJ35820, Gm313; poly(A)-specific ribonuclease
(PARN)-like domain containing 1
Length=531
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query 23 IEVWAHNLEEELDRIRDVVERYPYIALDTEFPGI---VARPTSNAL----DYNYRTVKYN 75
++V A E+ L ++++V ++ LD EF G+ ++RP +L Y + +
Sbjct 1 MDVGADEFEQSLPLLQELVAGADFVGLDIEFTGLRSNLSRPQQISLFDLPSEWYLKTRQS 60
Query 76 VDLLKVIQLGLTF-----ADSRGRLAEGTCTWQFNFRFDL--NEDMYAQNSIDFLKQSGI 128
V + Q+GL+ +S +A + F F + +E + +S+ FL Q G
Sbjct 61 VQQFTICQIGLSMFSSIEGESNKYVAHSCNFFLFPTTFGILDSEFSFQASSVQFLNQYGF 120
Query 129 DFDKQQKKGV 138
D++K K G+
Sbjct 121 DYNKFLKNGI 130
> mmu:74108 Parn, 1200003I18Rik, DAN; poly(A)-specific ribonuclease
(deadenylation nuclease) (EC:3.1.13.4); K01148 poly(A)-specific
ribonuclease [EC:3.1.13.4]
Length=624
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 19/127 (14%)
Query 23 IEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTSNALDYNYRTV--------KY 74
+E+ N + L ++ +E + A+D EF GI P+ AL + T K+
Sbjct 1 MEIIRSNFKINLHKVYQAIEEADFFAIDGEFSGISNGPSVTALTSGFDTPEERYQKLKKH 60
Query 75 NVDLLKVIQLGLTFADSRGRLAEGTCTWQFNF--------RFDLNEDMYAQ-NSIDFLKQ 125
++D L + Q GL A T FNF R + Q +SIDFL
Sbjct 61 SMDFL-LFQFGLC-AFKYDHTDSKHVTKSFNFYVFPKPFSRSSPDVKFVCQSSSIDFLAS 118
Query 126 SGIDFDK 132
G DF+K
Sbjct 119 QGFDFNK 125
> tpv:TP02_0676 hypothetical protein; K01148 poly(A)-specific
ribonuclease [EC:3.1.13.4]
Length=624
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query 37 IRDVVERYPYIALDTEFPGI-VARPTSNALDYNYRTVKYNVDLLKVIQLGLTFADSRGRL 95
I +++ER ++ALD E+ G+ V +D Y + Q+GLT A +
Sbjct 101 ITELIERSDFVALDVEYTGLHVKDERFIGVDKCYESHSLGAKKFIPCQIGLTMAKYENNI 160
Query 96 AEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKKGV 138
T T F + ++++FLK + DF+ + G+
Sbjct 161 WNLTTTSLFTIPSEGKSFSVNMSTLNFLKDNNFDFNSWIRNGI 203
> xla:394409 parn, parn-A, xparn; poly(A)-specific ribonuclease
(deadenylation nuclease) (EC:3.1.13.4); K01148 poly(A)-specific
ribonuclease [EC:3.1.13.4]
Length=631
Score = 34.7 bits (78), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 15/131 (11%)
Query 23 IEVWAHNLEEELDRIRDVVERYPYIALDTEFPGIVARPTSNALDYNYRTVKYNVDLLK-- 80
+E+ N ++ L ++ +E ++A+D EF GI P+ + L + T + LK
Sbjct 1 MEITRSNFKDTLPKVYKAIEEADFLAIDGEFSGISDGPSVSTLTNGFDTPEERYTKLKKH 60
Query 81 -----VIQLGL---TFADSRGR-LAEGTCTWQFNFRFDLNED----MYAQNSIDFLKQSG 127
+ Q GL + ++ + L + + F F+ N + +SIDFL G
Sbjct 61 SMEFLLFQFGLCTFNYDNTEAKYLMKSFNFYIFPKPFNRNSPDKKFVCQSSSIDFLANQG 120
Query 128 IDFDKQQKKGV 138
DF+K + G+
Sbjct 121 FDFNKVFRNGI 131
> hsa:154197 PNLDC1, FLJ40240, MGC138451, dJ195P10.2; poly(A)-specific
ribonuclease (PARN)-like domain containing 1
Length=520
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query 179 EALPESENAFFELVQDFFPSLYDIKFLLRDL-PNFNLSQGSSLQKVSEQLNVERIGPQHQ 237
LPES + F + + FP L D K + +D+ N + S+L +V E LN + + P
Sbjct 270 RPLPESYDQFKQNIHSLFPVLIDTKSVTKDIWKEMNFPRVSNLSEVYEVLNSD-LNPTKN 328
Query 238 AGSDSLVTCRTFFNLVESYFDGKID-EAKFSGVIYG 272
+G + + R E Y + K EA + + G
Sbjct 329 SGPEIVHASR-----CEKYVETKCPHEAAYDAFLCG 359
> hsa:23230 VPS13A, CHAC, CHOREIN, FLJ42030, KIAA0986; vacuolar
protein sorting 13 homolog A (S. cerevisiae)
Length=3135
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query 75 NVDLLKVIQLGLTFADSRGRLAEGTCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQ 134
D+L + + G+ F ++G + TC WQ++F ++ + I ++ I+ ++
Sbjct 3044 KTDMLMITRRGVLFV-TKGTFGQLTCEWQYSF-----DEFTKEPFIVHGRRLRIEAKERV 3097
Query 135 KKGVEVHDFGELIMNSGLVMNEDVKWI 161
K +FG++I ED +WI
Sbjct 3098 KSVFHAREFGKII---NFKTPEDARWI 3121
> tgo:TGME49_033930 poly(A)-specific ribonuclease, putative (EC:3.1.13.4);
K01148 poly(A)-specific ribonuclease [EC:3.1.13.4]
Length=1022
Score = 30.8 bits (68), Expect = 5.9, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
Query 24 EVWAHNLEEELDRIRDVVERYPYIALDTEFPGI-VARPTSNALDYNYRTVKYNVDLLKVI 82
E W +LE +R+V+ + ++ALD E G+ + +D Y +
Sbjct 316 ESWPTHLEA----LREVLAKAEFVALDVELTGLHMKNEKFLGVDRCYEAHCEGAKNFLPV 371
Query 83 QLGLTFADSRGRLAEG-----TCTWQFNFRFDLNEDMYAQNSIDFLKQSGIDFDKQQKKG 137
QLGL A R AE T + F D + ++ FL+++G DF+K +G
Sbjct 372 QLGLC-AARRASAAEPHKWILTPASVYMFPRDARLFQASTGTLMFLRENGFDFNKWLDQG 430
Query 138 V 138
+
Sbjct 431 I 431
> hsa:64800 EFCAB6, DJBP, FLJ23588, HSCBCIP1, KIAA1672, dJ185D5.1;
EF-hand calcium binding domain 6
Length=1501
Score = 30.4 bits (67), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 0/34 (0%)
Query 124 KQSGIDFDKQQKKGVEVHDFGELIMNSGLVMNED 157
K+ +DF K+ + VHDF +++ ++G+ M++D
Sbjct 640 KKRFLDFSKEPNGKINVHDFKKVLEDTGMPMDDD 673
Lambda K H
0.322 0.141 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 10401410116
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40