bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_0671_orf2
Length=126
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_073090 cell division protein 48, putative (EC:3.4.2... 158 3e-39
cpv:cgd1_330 CDC48 like AAA ATPase ortholog ; K13525 transitio... 141 6e-34
bbo:BBOV_IV008360 23.m05756; cell division control protein 48;... 127 8e-30
pfa:PFF0940c cell division cycle protein 48 homologue, putativ... 114 7e-26
tpv:TP01_0937 cell division cycle protein 48; K13525 transitio... 111 7e-25
cel:C06A1.1 cdc-48.1; Cell Division Cycle related family membe... 79.0 3e-15
cel:C41C4.8 cdc-48.2; Cell Division Cycle related family membe... 75.1 6e-14
xla:380491 vcp, MGC52611; valosin containing protein; K13525 t... 74.3 1e-13
dre:563679 MGC136908; zgc:136908 73.9 1e-13
ath:AT3G09840 CDC48; CDC48 (CELL DIVISION CYCLE 48); ATPase/ i... 72.4 3e-13
ath:AT5G03340 cell division cycle protein 48, putative / CDC48... 69.3 3e-12
tpv:TP03_0490 cell division cycle protein 48; K13525 transitio... 68.2 6e-12
tgo:TGME49_121640 cell division protein 48, putative ; K13525 ... 66.2 2e-11
dre:327197 vcp, CDC48, wu:fd16d05, wu:fj63d11; valosin contain... 65.5 4e-11
bbo:BBOV_IV001700 21.m02769; cell division cycle protein ATPas... 64.3 8e-11
ath:AT3G53230 cell division cycle protein 48, putative / CDC48... 62.8 3e-10
mmu:269523 Vcp, 3110001E05, CDC48, p97, p97/VCP; valosin conta... 60.5 1e-09
hsa:7415 VCP, IBMPFD, MGC131997, MGC148092, MGC8560, TERA, p97... 60.5 1e-09
sce:YDL126C CDC48; ATPase in ER, nuclear membrane and cytosol ... 56.2 2e-08
pfa:PF07_0047 cell division cycle ATPase, putative 53.1 2e-07
mmu:231912 Katnal1, MGC40859; katanin p60 subunit A-like 1 (EC... 46.2 2e-05
dre:492790 katnal1, zgc:101696; katanin p60 subunit A-like 1 (... 45.4 4e-05
hsa:84056 KATNAL1, MGC2599; katanin p60 subunit A-like 1 (EC:3... 44.7 7e-05
ath:AT3G01610 CDC48C; CDC48C; ATP binding / ATPase/ nucleoside... 41.6 6e-04
sce:YLR397C AFG2, DRG1; ATPase of the CDC48/PAS1/SEC18 (AAA) f... 40.8 0.001
dre:553631 katna1, MGC110580, si:dkey-15j16.1, zgc:110580; kat... 40.4 0.002
dre:368672 atad1a, ATPase, si:zc156n3.1, zgc:101570; ATPase fa... 39.7 0.003
dre:569539 fignl1, fb82h05, wu:fb82h05, wu:fj99a11, zgc:193664... 38.9 0.004
tpv:TP01_1158 AAA family ATPase; K14571 ribosome biogenesis AT... 37.4 0.011
dre:792998 si:ch73-197b13.2; K13339 peroxin-6 37.4 0.012
mmu:23924 Katna1; katanin p60 (ATPase-containing) subunit A1 (... 36.6 0.022
ath:AT3G27120 ATP binding / ATPase/ nucleoside-triphosphatase/... 36.6 0.023
cel:Y47G6A.10 spg-7; human SPG (spastic paraplegia) family mem... 36.6 0.023
xla:399380 katna1; katanin p60 (ATPase containing) subunit A 1... 36.2 0.024
sce:YPL074W YTA6; Putative ATPase of the CDC48/PAS1/SEC18 (AAA... 36.2 0.026
dre:368412 atad1b, atad1, bZ1G13.1, si:bz1g13.1, wu:fc15a10, z... 35.0 0.058
mmu:67979 Atad1, 4921525H23Rik, AW107648; ATPase family, AAA d... 35.0 0.060
hsa:84896 ATAD1, AFDC1, FLJ14600; ATPase family, AAA domain co... 35.0 0.060
mmu:60344 Fign, fi, fidget; fidgetin 34.7 0.070
cel:K04G2.3 cdc-48.3; Cell Division Cycle related family membe... 34.7 0.074
hsa:4931 NVL; nuclear VCP-like; K14571 ribosome biogenesis ATPase 34.7 0.077
tgo:TGME49_044590 p60 katanin, putative ; K07767 microtubule-s... 34.7 0.079
tgo:TGME49_035610 ATPase, AAA family domain-containing protein 34.3 0.11
ath:AT3G56690 CIP111; CIP111 (CAM INTERACTING PROTEIN 111); AT... 33.9 0.13
hsa:55137 FIGN; fidgetin 33.1 0.20
mmu:67459 Nvl, 1200009I24Rik; nuclear VCP-like; K14571 ribosom... 33.1 0.21
ath:AT1G80350 ERH3; ERH3 (ECTOPIC ROOT HAIR 3); ATP binding / ... 33.1 0.21
tgo:TGME49_115680 vacuolar sorting ATPase Vps4, putative ; K12... 33.1 0.25
cel:C24B5.2 spas-1; SPAStin (human neurodegeneration-associate... 32.7 0.26
xla:495930 atad1; ATPase family, AAA domain containing 1 32.7
> tgo:TGME49_073090 cell division protein 48, putative (EC:3.4.21.53);
K13525 transitional endoplasmic reticulum ATPase
Length=811
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 97/109 (88%), Gaps = 4/109 (3%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARA-AGTEGMDED---ESNVKYEITRK 56
A KTAGFSGAD+AE+CQRAAKAAIRDAIAAEELA+ AG + MD + ++++ YEITRK
Sbjct 682 AQKTAGFSGADLAELCQRAAKAAIRDAIAAEELAQVNAGADEMDAEEEEKTDIVYEITRK 741
Query 57 HFEEGLAGARRSVSQTDLSKYDSFRMKFDPIYKSQAAGGDGTIIVDWPN 105
HFEEGLAGARRSVSQTDL+KYD+FRMKFDP+YKSQAAGG+ ++++WP+
Sbjct 742 HFEEGLAGARRSVSQTDLTKYDNFRMKFDPLYKSQAAGGETQVLIEWPD 790
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEE 60
A T GF GAD+A++C AA + IR+ + +L + +D N +T++HF
Sbjct 406 AANTHGFVGADLAQLCTEAALSCIREKMDLIDLE----DDTIDAQVLN-SMAVTQEHFTS 460
Query 61 GL-----AGARRSVSQTDLSKYD 78
L + R +V + K+D
Sbjct 461 ALQCCNPSSLRETVVEVPNVKWD 483
> cpv:cgd1_330 CDC48 like AAA ATPase ortholog ; K13525 transitional
endoplasmic reticulum ATPase
Length=820
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 98/130 (75%), Gaps = 9/130 (6%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGM----DEDESNVKYEITRK 56
A KT GFSGAD+AE+CQRAAKAAIRDAIAAEEL +A+G + DE +S++ YEI RK
Sbjct 696 AQKTEGFSGADLAELCQRAAKAAIRDAIAAEELKKASGDDSAMKIEDEVDSHI-YEIGRK 754
Query 57 HFEEGLAGARRSVSQTDLSKYDSFRMKFDPIYKSQAAGGDGTIIVDWPNTDGAATDVGRV 116
HFEE AGARRSVS TDL+KYD FRMKFDP+Y +Q +GG+G +DWP++ A +
Sbjct 755 HFEEAFAGARRSVSITDLAKYDQFRMKFDPVYVTQ-SGGEG-FTIDWPDSTHAQYS-API 811
Query 117 DEGDDDDLYS 126
D+ D DDLYS
Sbjct 812 DD-DADDLYS 820
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAI 28
A T GF GAD+A++C AA IR+ +
Sbjct 420 AANTHGFVGADLAQLCTEAALCCIREKM 447
> bbo:BBOV_IV008360 23.m05756; cell division control protein 48;
K13525 transitional endoplasmic reticulum ATPase
Length=804
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 65/105 (61%), Positives = 79/105 (75%), Gaps = 5/105 (4%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEE 60
A KTAGFSGAD+AEMCQ AA++AIRDAIA EE TEG + YEI RKHF+E
Sbjct 686 AQKTAGFSGADLAEMCQIAARSAIRDAIAYEEKHGKTPTEGT----PDFTYEIQRKHFQE 741
Query 61 GLAGARRSVSQTDLSKYDSFRMKFDPIYKSQAAGGDGTIIVDWPN 105
GLA AR SV+ TDL+K+D+FR KFDP+YK++ AGGD I +DWP+
Sbjct 742 GLANARHSVTSTDLAKFDNFRNKFDPLYKTRGAGGD-EIDIDWPD 785
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELAR-AAGTEGMDEDESNVKYEITRKHFE 59
A + GF GAD+A++C AA IR+ + A +L T +D +T++HF
Sbjct 410 AANSHGFVGADLAQLCTEAALGCIREKMGAIDLEEDTIDTAILD------SMAVTQEHFN 463
Query 60 EGLA-----GARRSVSQTDLSKYD 78
+A R +V + K+D
Sbjct 464 AAIATCNPSSLRETVVEIPNVKWD 487
> pfa:PFF0940c cell division cycle protein 48 homologue, putative;
K13525 transitional endoplasmic reticulum ATPase
Length=828
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 94/153 (61%), Gaps = 30/153 (19%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDE---------------- 44
A KTAGFSGAD+AE+CQRAA+AAIRDAI AEE+ + + E ++
Sbjct 679 AQKTAGFSGADLAELCQRAARAAIRDAIDAEEMNKKSKLELSNKKENEQNETNENDVHNK 738
Query 45 -----------DESNVKYEITRKHFEEGLAGARRSVSQTDLSKYDSFRMKFDPIYKSQAA 93
D+ N+KYEITR HF+EGLAGARRSVSQ DL KYD+FR+KFDP+YK++
Sbjct 739 TEQQANDQQKNDDDNIKYEITRHHFKEGLAGARRSVSQADLIKYDNFRIKFDPLYKTKTG 798
Query 94 GGDGTIIVDWPNTDGAATDVGRVDEGDDDDLYS 126
G I+DWP+ D V D+DLYS
Sbjct 799 GTGDDFIIDWPDEDNNDDTPAYV---VDEDLYS 828
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEE 60
A+ T GF GAD+A++C AA IR+ + +L + + + E +T+ HF
Sbjct 403 ASNTHGFVGADLAQLCTEAALTCIREKMDVIDLE-----DEIIDKEVLESMCVTQDHFNM 457
Query 61 GL-----AGARRSVSQTDLSKYD 78
L + R +V + K+D
Sbjct 458 ALGTCNPSSLRETVVEVPNVKWD 480
> tpv:TP01_0937 cell division cycle protein 48; K13525 transitional
endoplasmic reticulum ATPase
Length=811
Score = 111 bits (277), Expect = 7e-25, Method: Composition-based stats.
Identities = 66/126 (52%), Positives = 86/126 (68%), Gaps = 5/126 (3%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEE 60
A KT GFSGAD+AEMCQ AA+AAIRDAI EE+ + + + KYEITRKHF+E
Sbjct 691 AQKTNGFSGADLAEMCQIAARAAIRDAIKHEEMMNNSSDANGMPNGTEFKYEITRKHFQE 750
Query 61 GLAGARRSVSQTDLSKYDSFRMKFDPIYKSQAAGGDGTIIVDWPNTDGAATDVGRVDEGD 120
GLA AR SV+ +D++KYD+FR KFDP+YK++ + G I +DWP D +D +
Sbjct 751 GLANARHSVTSSDITKYDAFRTKFDPLYKNRNSTGQNDIDIDWPENDEVI-----MDPIE 805
Query 121 DDDLYS 126
+DDLYS
Sbjct 806 EDDLYS 811
Score = 28.9 bits (63), Expect = 4.3, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 0/33 (0%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEEL 33
A + GF GAD+A++C +A + IR+ + +L
Sbjct 415 AANSHGFVGADLAQLCTESALSCIREKMGVIDL 447
> cel:C06A1.1 cdc-48.1; Cell Division Cycle related family member
(cdc-48.1); K13525 transitional endoplasmic reticulum ATPase
Length=809
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 72/134 (53%), Gaps = 15/134 (11%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAE-------ELARAAGTEGMDEDESNVKYEI 53
A T GFSGAD+ E+CQRA K AIR++I E + +A G E M++D + EI
Sbjct 683 AKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEI 742
Query 54 TRKHFEEGLAGARRSVSQTDLSKYDSFRMKFDPIYKSQAAGGDGTIIVDWPNTD-GAATD 112
TR HFEE + ARRSV+ D+ KY+ F + +S+ G + +P G+
Sbjct 743 TRAHFEEAMKFARRSVTDNDIRKYEMFAQT---LQQSRGFGNN----FKFPGEQRGSDAP 795
Query 113 VGRVDEGDDDDLYS 126
V DDDDLY+
Sbjct 796 SAPVPAQDDDDLYN 809
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAI 28
AN+ GF GAD+A +C AA IR+ +
Sbjct 406 ANECHGFVGADLASLCSEAALQQIREKM 433
> cel:C41C4.8 cdc-48.2; Cell Division Cycle related family member
(cdc-48.2); K13525 transitional endoplasmic reticulum ATPase
Length=810
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAE---ELAR----AAGTEGMDEDESNVKYEI 53
A T GFSGAD+ E+CQRA K AIR++I E E R A G E M+++ ++ EI
Sbjct 681 AKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADPVPEI 740
Query 54 TRKHFEEGLAGARRSVSQTDLSKYDSF 80
TR HFEE + ARRSV+ D+ KY+ F
Sbjct 741 TRAHFEEAMKFARRSVTDNDIRKYEMF 767
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAI 28
AN+ GF GAD+A +C AA IR+ +
Sbjct 405 ANECHGFVGADLASLCSEAAIQQIREKM 432
> xla:380491 vcp, MGC52611; valosin containing protein; K13525
transitional endoplasmic reticulum ATPase
Length=805
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAE---ELARAAGTEGMDEDESNVKYEITRKH 57
A T GFSGAD+ E+CQRA K AIR++I E E R M+ +E + EI R H
Sbjct 676 AKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRDH 735
Query 58 FEEGLAGARRSVSQTDLSKYDSF 80
FEE + ARRSVS D+ KY+ F
Sbjct 736 FEEAMRLARRSVSDNDIRKYEMF 758
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 0/25 (0%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIR 25
AN+T G GAD+A +C AA AIR
Sbjct 400 ANETHGHVGADLAALCSEAALQAIR 424
> dre:563679 MGC136908; zgc:136908
Length=805
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 52/81 (64%), Gaps = 5/81 (6%)
Query 4 TAGFSGADIAEMCQRAAKAAIRDAIAAE---ELARAAGTE-GMDEDESNVKYEITRKHFE 59
T GFSGAD+ E+CQRA K AIR+AI AE E R A E MD+D V EI + HFE
Sbjct 681 TEGFSGADLTEICQRACKLAIREAIEAEIRAERQRQARKETAMDDDYDPVP-EIRKDHFE 739
Query 60 EGLAGARRSVSQTDLSKYDSF 80
E + ARRSVS D+ KY+ F
Sbjct 740 EAMRFARRSVSDNDIRKYEMF 760
> ath:AT3G09840 CDC48; CDC48 (CELL DIVISION CYCLE 48); ATPase/
identical protein binding; K13525 transitional endoplasmic
reticulum ATPase
Length=809
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAI---AAEELARAAGTEGMDEDESNVKYEITRKH 57
A T GFSGADI E+CQRA K AIR+ I +E R+ E M+ED + EI H
Sbjct 680 AKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAH 739
Query 58 FEEGLAGARRSVSQTDLSKYDSF 80
FEE + ARRSVS D+ KY +F
Sbjct 740 FEESMKYARRSVSDADIRKYQAF 762
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query 4 TAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEEGLA 63
T G+ GAD+A +C AA IR+ + +L + +D + N +T +HF L
Sbjct 406 THGYVGADLAALCTEAALQCIREKMDVIDLE----DDSIDAEILN-SMAVTNEHFHTALG 460
Query 64 GARRS 68
+ S
Sbjct 461 NSNPS 465
> ath:AT5G03340 cell division cycle protein 48, putative / CDC48,
putative; K13525 transitional endoplasmic reticulum ATPase
Length=810
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAE---ELARAAGTEGMDEDESNVKY-EITRK 56
A T GFSGADI E+CQRA K AIR+ I + E R+ E M+ED + + EI
Sbjct 679 AKYTQGFSGADITEICQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDEVSEIRAA 738
Query 57 HFEEGLAGARRSVSQTDLSKYDSF 80
HFEE + ARRSVS D+ KY +F
Sbjct 739 HFEESMKYARRSVSDADIRKYQAF 762
Score = 27.7 bits (60), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 0/25 (0%)
Query 4 TAGFSGADIAEMCQRAAKAAIRDAI 28
T G+ GAD+A +C AA IR+ +
Sbjct 406 THGYVGADLAALCTEAALQCIREKM 430
> tpv:TP03_0490 cell division cycle protein 48; K13525 transitional
endoplasmic reticulum ATPase
Length=954
Score = 68.2 bits (165), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEE 60
A + G+SGADIAE+C RAA+ AIR++I EE+ R E ++D IT KHF+
Sbjct 873 AQQLDGYSGADIAEICHRAAREAIRESI-EEEIKRKRPLEKGEKDPVPF---ITNKHFQV 928
Query 61 GLAGARRSVSQTDLSKYDSFRMK 83
L +R+SV Q+D+ Y+SF+ K
Sbjct 929 ALRNSRKSVEQSDIQLYESFKNK 951
Score = 34.7 bits (78), Expect = 0.080, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEE 60
A + GF GADIA++C AA + I++ I + + + E + +D + + + KHF E
Sbjct 593 AKECHGFVGADIAQLCFEAAMSCIKENINSPAIHQYYYAEEIPQDILS-RMLVRNKHFME 651
Query 61 GLA 63
L+
Sbjct 652 ALS 654
> tgo:TGME49_121640 cell division protein 48, putative ; K13525
transitional endoplasmic reticulum ATPase
Length=963
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEE 60
A + GFSGADI E+CQRAAK A+R++I AE A + E E + I++KHF+E
Sbjct 846 ARRLEGFSGADITEICQRAAKNAVRESIQAE----VARGRPLAEGEKDPVPFISKKHFDE 901
Query 61 GLAGARRSVSQTDLSKYDSF 80
GARRSV + + Y F
Sbjct 902 AFKGARRSVPEDMVKVYTQF 921
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query 6 GFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDE--DESNVKYEITRKHFEEGLA 63
GF GAD+A++C AA +R+ + + DE E+ K+++ HF L+
Sbjct 575 GFVGADMAQLCLEAAMQCVRENCQFVDFDK-------DEVDPETLAKFQVRMPHFVHALS 627
> dre:327197 vcp, CDC48, wu:fd16d05, wu:fj63d11; valosin containing
protein; K13525 transitional endoplasmic reticulum ATPase
Length=806
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARA---AGTEGMDEDESNVKYEITRKH 57
A T GFSGAD+ E+CQRA K AIR++I E M+ +E + EI + H
Sbjct 676 AKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAMEVEEDDPVPEIRKDH 735
Query 58 FEEGLAGARRSVSQTDLSKYDSF 80
FEE + ARRSVS D+ KY+ F
Sbjct 736 FEEAMRFARRSVSDNDIRKYEMF 758
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 0/25 (0%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIR 25
AN+T G GAD+A +C AA AIR
Sbjct 400 ANETHGHVGADLAALCSEAALQAIR 424
> bbo:BBOV_IV001700 21.m02769; cell division cycle protein ATPase;
K13525 transitional endoplasmic reticulum ATPase
Length=922
Score = 64.3 bits (155), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEE 60
A + G+SGADIAE+C RAA+ AIR++I E+ R G + +E V Y IT +HF
Sbjct 838 AEELEGYSGADIAEICHRAAREAIRESI-EHEIKR--GRRLKEGEEDPVPY-ITNEHFRV 893
Query 61 GLAGARRSVSQTDLSKYDSFRMKF 84
+A AR+SV + D+ +Y+ F+ K
Sbjct 894 AMANARKSVRKEDIKRYEQFKKKL 917
Score = 33.1 bits (74), Expect = 0.23, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEE 60
A + G+ GADIA++C AA IR+ +A+ ++ + E E K I +HF E
Sbjct 557 AGECHGYVGADIAQLCFEAAMCCIRENLASMDMLQ---FEDKVSPEVLNKLVIQNRHFAE 613
Query 61 GL 62
L
Sbjct 614 AL 615
> ath:AT3G53230 cell division cycle protein 48, putative / CDC48,
putative; K13525 transitional endoplasmic reticulum ATPase
Length=815
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 70/140 (50%), Gaps = 18/140 (12%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIA--AEELARAAGTEGMDEDESNVKYEITRKHF 58
A T GFSGADI E+CQR+ K AIR+ I E+ + A + E++ EI HF
Sbjct 680 AKYTQGFSGADITEICQRSCKYAIRENIEKDIEKERKRAESPEAMEEDEEEIAEIKAGHF 739
Query 59 EEGLAGARRSVSQTDLSKYDSFRMKFDPIYKSQAAGGDGTIIVDWPN-----TDGAATDV 113
EE + ARRSVS D+ KY +F + +S+ G + D P GAA V
Sbjct 740 EESMKYARRSVSDADIRKYQAFAQT---LQQSRGFGSEFR-FPDAPTGTTGAFPGAAATV 795
Query 114 GRVDE-------GDDDDLYS 126
G VD DDDDLYS
Sbjct 796 GGVDPFATSGGAADDDDLYS 815
> mmu:269523 Vcp, 3110001E05, CDC48, p97, p97/VCP; valosin containing
protein; K13525 transitional endoplasmic reticulum ATPase
Length=806
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARA---AGTEGMDEDESNVKYEITRKH 57
A T GFSGAD+ E+CQRA K AIR++I +E M+ +E + EI R H
Sbjct 676 AKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDH 735
Query 58 FEEGLAGARRSVSQTDLSKYDSF 80
FEE + ARRSVS D+ KY+ F
Sbjct 736 FEEAMRFARRSVSDNDIRKYEMF 758
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 0/25 (0%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIR 25
AN+T G GAD+A +C AA AIR
Sbjct 400 ANETHGHVGADLAALCSEAALQAIR 424
> hsa:7415 VCP, IBMPFD, MGC131997, MGC148092, MGC8560, TERA, p97;
valosin containing protein; K13525 transitional endoplasmic
reticulum ATPase
Length=806
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARA---AGTEGMDEDESNVKYEITRKH 57
A T GFSGAD+ E+CQRA K AIR++I +E M+ +E + EI R H
Sbjct 676 AKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDH 735
Query 58 FEEGLAGARRSVSQTDLSKYDSF 80
FEE + ARRSVS D+ KY+ F
Sbjct 736 FEEAMRFARRSVSDNDIRKYEMF 758
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 0/25 (0%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIR 25
AN+T G GAD+A +C AA AIR
Sbjct 400 ANETHGHVGADLAALCSEAALQAIR 424
> sce:YDL126C CDC48; ATPase in ER, nuclear membrane and cytosol
with homology to mammalian p97; in a complex with Npl4p and
Ufd1p participates in retrotranslocation of ubiquitinated
proteins from the ER into the cytosol for degradation by the
proteasome; K13525 transitional endoplasmic reticulum ATPase
Length=835
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 15/95 (15%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAA---EELARAAGTEGMD------------ED 45
A T GFSGAD+ + QRAAK AI+D+I A E + EG D E
Sbjct 686 AKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEMTDEGAKAEQEP 745
Query 46 ESNVKYEITRKHFEEGLAGARRSVSQTDLSKYDSF 80
E + IT++HF E + A+RSVS +L +Y+++
Sbjct 746 EVDPVPYITKEHFAEAMKTAKRSVSDAELRRYEAY 780
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAI 28
A +T G+ GADIA +C AA IR+ +
Sbjct 410 AAETHGYVGADIASLCSEAAMQQIREKM 437
> pfa:PF07_0047 cell division cycle ATPase, putative
Length=1229
Score = 53.1 bits (126), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYE-------- 52
A +T GFSGADI +CQ A AI++ I + + E +++++ K +
Sbjct 1131 AKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKIDDTDTYDPV 1190
Query 53 --ITRKHFEEGLAGARRSVSQTDLSKYDSFRMKF 84
+++KHF+ AR S+ D+ KY+ F+ K
Sbjct 1191 PTLSKKHFDLAFKNARISIQPEDVLKYEKFKEKL 1224
Score = 29.6 bits (65), Expect = 2.5, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGM----DEDESNVKYE 52
A + G+ GAD+A++C AA I++ I +L E M DED+ N+ E
Sbjct 723 AKECHGYVGADLAQLCFEAAIQCIKEHIHFLDLDEEDFIEFMKISVDEDKKNMGNE 778
> mmu:231912 Katnal1, MGC40859; katanin p60 subunit A-like 1 (EC:3.6.4.3);
K07767 microtubule-severing ATPase [EC:3.6.4.3]
Length=488
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIR---DAIAAEELARAAGTEGMDEDESNVKYEITRKH 57
A+KT G+SGADI +C+ A+ A+R + ++ EE+ RA E ++ +TR
Sbjct 407 ADKTEGYSGADITNICRDASLMAMRRRINGLSPEEI-RALSKE-------ELQMPVTRGD 458
Query 58 FEEGLAGARRSVSQTDLSKYDSFRMKF 84
E L +SVS DL KY+ + ++F
Sbjct 459 LELALKKIAKSVSAADLEKYEKWMVEF 485
> dre:492790 katnal1, zgc:101696; katanin p60 subunit A-like 1
(EC:3.6.4.3); K07767 microtubule-severing ATPase [EC:3.6.4.3]
Length=488
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAI---AAEELARAAGTEGMDEDESNVKYEITRKH 57
A K G+SGADI +C+ A+ A+R I + EE+ + +DE ++ +T +
Sbjct 407 AEKIEGYSGADITNVCRDASMMAMRRRIQGLSPEEI------RALSKDE--LQMPVTMED 458
Query 58 FEEGLAGARRSVSQTDLSKYDSFRMKF 84
FE L +SVS DL KY+S+ +F
Sbjct 459 FELALKKISKSVSAADLEKYESWMSEF 485
> hsa:84056 KATNAL1, MGC2599; katanin p60 subunit A-like 1 (EC:3.6.4.3);
K07767 microtubule-severing ATPase [EC:3.6.4.3]
Length=490
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIR---DAIAAEELARAAGTEGMDEDESNVKYEITRKH 57
A K G+SGADI +C+ A+ A+R + ++ EE+ RA E ++ +T+
Sbjct 409 AEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEI-RALSKE-------ELQMPVTKGD 460
Query 58 FEEGLAGARRSVSQTDLSKYDSFRMKF 84
FE L +SVS DL KY+ + ++F
Sbjct 461 FELALKKIAKSVSAADLEKYEKWMVEF 487
> ath:AT3G01610 CDC48C; CDC48C; ATP binding / ATPase/ nucleoside-triphosphatase/
nucleotide binding; K14571 ribosome biogenesis
ATPase
Length=820
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query 2 NKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNV-KYEITRKHFEE 60
N GFSGAD+A + Q+A A+ + I + +E ++D +++ + I +HFE+
Sbjct 725 NNCEGFSGADLAHLVQKATFQAVEEMIGS--------SESSEDDVTDITQCTIKTRHFEQ 776
Query 61 GLAGARRSVSQTDLSKYDSFRMKF 84
L+ SV++ YD+ K
Sbjct 777 ALSLVSPSVNKQQRRHYDALSTKL 800
> sce:YLR397C AFG2, DRG1; ATPase of the CDC48/PAS1/SEC18 (AAA)
family, forms a hexameric complex; is essential for pre-60S
maturation and release of several preribosome maturation factors;
may be involved in degradation of aberrant mRNAs; K14575
AAA family ATPase
Length=780
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 20/83 (24%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEE 60
A++T G+SGA++ +CQ A AAI ED K E+ +HFE+
Sbjct 713 ADRTEGYSGAEVVLLCQEAGLAAIM------------------EDLDVAKVEL--RHFEK 752
Query 61 GLAGARRSVSQTDLSKYDSFRMK 83
G R ++ LS Y+ F ++
Sbjct 753 AFKGIARGITPEMLSYYEEFALR 775
> dre:553631 katna1, MGC110580, si:dkey-15j16.1, zgc:110580; katanin
p60 (ATPase-containing) subunit A 1 (EC:3.6.4.3); K07767
microtubule-severing ATPase [EC:3.6.4.3]
Length=485
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIR---DAIAAEELARAAGTEGMDEDESNVKYEITRKH 57
A + G+SGADI +C+ A+ A+R + + EE+ + +DE ++ T +
Sbjct 404 AEQMEGYSGADITNVCRDASLMAMRRRIEGLTPEEI------RNLPKDEMHMP--TTMED 455
Query 58 FEEGLAGARRSVSQTDLSKYDSFRMKF 84
FE L +SVS DL KY+ + +F
Sbjct 456 FETALKKVSKSVSAADLEKYEKWIAEF 482
> dre:368672 atad1a, ATPase, si:zc156n3.1, zgc:101570; ATPase
family, AAA domain containing 1a
Length=380
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 33/49 (67%), Gaps = 0/49 (0%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNV 49
A+++ G+SG+D+ E+C+ AA +RD + +++ + A +DE+E +V
Sbjct 291 ASQSEGYSGSDLKELCRDAAMYRVRDYVRKQQMKQIAQQFQLDEEEEHV 339
> dre:569539 fignl1, fb82h05, wu:fb82h05, wu:fj99a11, zgc:193664;
fidgetin-like 1
Length=661
Score = 38.9 bits (89), Expect = 0.004, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query 4 TAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEEGLA 63
T GFSGAD+ ++C+ AA IR +I+ ++A M E + Y F+E L
Sbjct 587 TEGFSGADMTQLCREAALGPIR-SISLSDIATI-----MAEQVRPILYS----DFQEALK 636
Query 64 GARRSVSQTDLSKYDSFRMKF 84
R SVS DL Y+ + F
Sbjct 637 TVRPSVSSKDLELYEEWNKTF 657
> tpv:TP01_1158 AAA family ATPase; K14571 ribosome biogenesis
ATPase
Length=727
Score = 37.4 bits (85), Expect = 0.011, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEE 60
A +T G GAD+A +C+ A+ AI D I + + E++V + +HF++
Sbjct 649 AQRTNG--GADLASLCREASIIAI-DEIRMSMSESSVSDYKLSAPENSV---LKMEHFQK 702
Query 61 GLAGARRSVSQTDLSKYDSFRMKF 84
L + SV Q + Y +FR+K+
Sbjct 703 ALLKVKPSVKQQQIDFYHNFRLKY 726
> dre:792998 si:ch73-197b13.2; K13339 peroxin-6
Length=956
Score = 37.4 bits (85), Expect = 0.012, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query 7 FSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEEGLAGAR 66
+GAD+ +C A A++ I+ TEG+D + S++ + + F E L+G +
Sbjct 885 LTGADLYSLCSDAMMCAVKRKISRI-------TEGVDSELSSLT--LCSEDFSEALSGLQ 935
Query 67 RSVSQTDLSKYDSFRMKF 84
SVS+ +S+Y + K
Sbjct 936 PSVSEQQISRYQLLQQKL 953
> mmu:23924 Katna1; katanin p60 (ATPase-containing) subunit A1
(EC:3.6.4.3); K07767 microtubule-severing ATPase [EC:3.6.4.3]
Length=493
Score = 36.6 bits (83), Expect = 0.022, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIR---DAIAAEELARAAGTEGMDEDESNVKYEITRKH 57
A G+SGADI +C+ A+ A+R + + EE+ R E M T +
Sbjct 412 AENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEI-RNLSREAM-------HMPTTMED 463
Query 58 FEEGLAGARRSVSQTDLSKYDSFRMKF 84
FE L +SVS D+ +Y+ + ++F
Sbjct 464 FEMALKKISKSVSAADIERYEKWIVEF 490
> ath:AT3G27120 ATP binding / ATPase/ nucleoside-triphosphatase/
nucleotide binding
Length=476
Score = 36.6 bits (83), Expect = 0.023, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query 2 NKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEEG 61
N T G+SG+D+ + + A +R+A L R + +D+ + +T + F++
Sbjct 397 NLTEGYSGSDMKNLVKDATMGPLREA-----LKRGIDITNLTKDDMRL---VTLQDFKDA 448
Query 62 LAGARRSVSQTDLSKYDSFRMKF 84
L R SVSQ +L Y+++ +F
Sbjct 449 LQEVRPSVSQNELGIYENWNNQF 471
> cel:Y47G6A.10 spg-7; human SPG (spastic paraplegia) family member
(spg-7); K08956 AFG3 family protein [EC:3.4.24.-]
Length=782
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 22/62 (35%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEE 60
A T GFSGADI+ +C AA A RDA +EI+ KHFE+
Sbjct 495 AAHTPGFSGADISNVCNEAALIAARDA----------------------NHEISNKHFEQ 532
Query 61 GL 62
+
Sbjct 533 AI 534
> xla:399380 katna1; katanin p60 (ATPase containing) subunit A
1 (EC:3.6.4.3); K07767 microtubule-severing ATPase [EC:3.6.4.3]
Length=488
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 17/85 (20%)
Query 6 GFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDE------SNVKYEITRKHFE 59
G+SGADI +C+ A+ A+R I EG+ +E ++ T + FE
Sbjct 412 GYSGADITNVCRDASLMAMRRRI-----------EGLTPEEIRNLSRDDMHMPTTMEDFE 460
Query 60 EGLAGARRSVSQTDLSKYDSFRMKF 84
L +SVS +D+ KY+ + +F
Sbjct 461 MALKKVSKSVSASDIEKYEKWIEEF 485
> sce:YPL074W YTA6; Putative ATPase of the CDC48/PAS1/SEC18 (AAA)
family, localized to the cortex of mother cells but not
to daughter cells
Length=754
Score = 36.2 bits (82), Expect = 0.026, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query 4 TAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEEGLA 63
T GFSG+D+ + + AA IRD G + M D ++ I K F+ L
Sbjct 680 TEGFSGSDLTSLAKEAAMEPIRD----------LGDKLMFADFDKIR-GIEIKDFQNALL 728
Query 64 GARRSVSQTDLSKYDSFRMKF 84
++SVS L KY+ + KF
Sbjct 729 TIKKSVSSESLQKYEEWSSKF 749
> dre:368412 atad1b, atad1, bZ1G13.1, si:bz1g13.1, wu:fc15a10,
zgc:110042; ATPase family, AAA domain containing 1b
Length=362
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 0/31 (0%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAE 31
A +T GFSG+D+ EMC+ AA +RD + E
Sbjct 292 AKQTDGFSGSDLREMCRDAALLCVRDFVHQE 322
> mmu:67979 Atad1, 4921525H23Rik, AW107648; ATPase family, AAA
domain containing 1
Length=361
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDE 46
A +T GFSG+D+ EMC+ AA +R E + E DEDE
Sbjct 288 AQETDGFSGSDLKEMCRDAALLCVR------EYVNSTSEESHDEDE 327
> hsa:84896 ATAD1, AFDC1, FLJ14600; ATPase family, AAA domain
containing 1
Length=361
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDE 46
A +T GFSG+D+ EMC+ AA +R E + E DEDE
Sbjct 288 AQETDGFSGSDLKEMCRDAALLCVR------EYVNSTSEESHDEDE 327
> mmu:60344 Fign, fi, fidget; fidgetin
Length=759
Score = 34.7 bits (78), Expect = 0.070, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query 3 KTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEEGL 62
+T GFSG D+A +CQ AA + A+ A +L+ ++ +T + FE
Sbjct 684 RTEGFSGLDVAHLCQEAAVGPLH-AMPATDLSAIMPSQ---------LRPVTYQDFENAF 733
Query 63 AGARRSVSQTDLSKYDSFRMKF 84
+ S+SQ +L Y + F
Sbjct 734 CKIQPSISQKELDMYVEWNKMF 755
> cel:K04G2.3 cdc-48.3; Cell Division Cycle related family member
(cdc-48.3); K13525 transitional endoplasmic reticulum ATPase
Length=724
Score = 34.7 bits (78), Expect = 0.074, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 20/79 (25%)
Query 3 KTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEEGL 62
KT+G+SGA++ +C+ AA A+R++I D + V++ HFE+ L
Sbjct 659 KTSGYSGAELVAVCRTAAMFAMRESI----------------DATIVQW----THFEQAL 698
Query 63 AGARRSVSQTDLSKYDSFR 81
A L YD F+
Sbjct 699 AAVVSRTEAYLLEIYDDFK 717
> hsa:4931 NVL; nuclear VCP-like; K14571 ribosome biogenesis ATPase
Length=856
Score = 34.7 bits (78), Expect = 0.077, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query 7 FSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEEGLAGAR 66
++GAD++ + + A+ A+R +A ++ G + +++ KHFEE R
Sbjct 788 YTGADLSALVREASICALRQEMARQKSGNEKG-----------ELKVSHKHFEEAFKKVR 836
Query 67 RSVSQTDLSKYDSFR 81
S+S+ D Y+ +
Sbjct 837 SSISKKDQIMYERLQ 851
Score = 30.0 bits (66), Expect = 1.9, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEE 60
A+ T GF GAD+ +C+ AA A+ + + + E D V+ EE
Sbjct 463 AHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSKGVQ--------EE 514
Query 61 GLAGARRSVSQTDLSKYDSFRMKFDPIYKSQAAG 94
L S +Q +L + DP+ + Q G
Sbjct 515 RLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQG 548
> tgo:TGME49_044590 p60 katanin, putative ; K07767 microtubule-severing
ATPase [EC:3.6.4.3]
Length=410
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEEL-----ARAAGTEGMDEDESNVKYEITR 55
AN+T FSGAD+ +C+ A +R A L R AG G E+++ V +
Sbjct 325 ANRTEQFSGADLQHLCREACMNPLRRVFADLPLDEIKAKREAGAFG--EEQTRV----SM 378
Query 56 KHFEEGLAGARRSVSQTDLSKYDSFRMKF 84
FE+ L A + +++K++ + +F
Sbjct 379 ADFEQALEKANPATHAAEIAKFEKWNAEF 407
> tgo:TGME49_035610 ATPase, AAA family domain-containing protein
Length=746
Score = 34.3 bits (77), Expect = 0.11, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 23/29 (79%), Gaps = 0/29 (0%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIA 29
A+ T G+SGA+I +C+ A+ AA+R+A+A
Sbjct 634 ASATHGYSGAEIVMICREASMAAVREAVA 662
> ath:AT3G56690 CIP111; CIP111 (CAM INTERACTING PROTEIN 111);
ATPase/ calmodulin binding
Length=1022
Score = 33.9 bits (76), Expect = 0.13, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 26/34 (76%), Gaps = 0/34 (0%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELA 34
A+ T G++GADI+ +C+ AA AA+ +++ EE++
Sbjct 922 ASITKGYTGADISLICREAAIAALEESLEMEEIS 955
> hsa:55137 FIGN; fidgetin
Length=759
Score = 33.1 bits (74), Expect = 0.20, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 10/82 (12%)
Query 3 KTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEEGL 62
+T GFSG D+A +CQ A + A+ A +L+ ++ +T + FE
Sbjct 684 RTEGFSGLDVAHLCQEAVVGPLH-AMPATDLSAIMPSQ---------LRPVTYQDFENAF 733
Query 63 AGARRSVSQTDLSKYDSFRMKF 84
+ S+SQ +L Y + F
Sbjct 734 CKIQPSISQKELDMYVEWNKMF 755
> mmu:67459 Nvl, 1200009I24Rik; nuclear VCP-like; K14571 ribosome
biogenesis ATPase
Length=855
Score = 33.1 bits (74), Expect = 0.21, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query 7 FSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEEGLAGAR 66
++GAD+ + + A+ A+R I A++ AG + +++ KHFE+ +
Sbjct 787 YTGADLTALVREASLCALRQEITAQKNGVGAG-----------ELKVSHKHFEDAFKKVK 835
Query 67 RSVSQTDLSKYDSFR 81
S+S D Y++ +
Sbjct 836 PSISIKDQVMYEALQ 850
> ath:AT1G80350 ERH3; ERH3 (ECTOPIC ROOT HAIR 3); ATP binding
/ nucleoside-triphosphatase/ nucleotide binding; K07767 microtubule-severing
ATPase [EC:3.6.4.3]
Length=523
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEE 60
A +T G+SG D+ +C+ A+ +R IA + R +D SN + FEE
Sbjct 441 ARRTEGYSGDDLTNVCRDASMNGMRRKIAGK--TRDEIKNMSKDDISNDPVAMC--DFEE 496
Query 61 GLAGARRSVSQTDLSKYDSFRMKF 84
+ + SVS +D+ K++ + +F
Sbjct 497 AIRKVQPSVSSSDIEKHEKWLSEF 520
> tgo:TGME49_115680 vacuolar sorting ATPase Vps4, putative ; K12196
vacuolar protein-sorting-associated protein 4
Length=502
Score = 33.1 bits (74), Expect = 0.25, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 21/105 (20%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARA--AGTEGM------DEDESNVKY- 51
A +T GFSGADI+ + + A +R AA R GT + D D S V+
Sbjct 393 ARQTEGFSGADISVVVRDALFQPLRKCRAATHFKRVFLDGTHFLSPCPPGDSDPSKVEMR 452
Query 52 ------------EITRKHFEEGLAGARRSVSQTDLSKYDSFRMKF 84
E++ + F L AR SVS+ D+ +++ + +F
Sbjct 453 LMEVPPNRLLPPELSMEDFIAVLRNARPSVSEEDIRRHEEWTRRF 497
> cel:C24B5.2 spas-1; SPAStin (human neurodegeneration-associated
AAA ATPase) related family member (spas-1)
Length=451
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAIAAEELARAAGTEGMDEDESNVKYEITRKHFEE 60
A+ T+GFS +D+ +C+ AA IR+ + ++ + T+G ++ +I F+
Sbjct 376 ASNTSGFSNSDLVALCKEAAMVPIREI----DRSKLSMTDG-----EKIR-KIRASDFDT 425
Query 61 GLAGARRSVSQTDLSKYDSFRMKF 84
L R S SQ +SK F F
Sbjct 426 ALRTIRPSTSQKIMSKLSDFSRSF 449
> xla:495930 atad1; ATPase family, AAA domain containing 1
Length=360
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 0/28 (0%)
Query 1 ANKTAGFSGADIAEMCQRAAKAAIRDAI 28
A + GFSG+D+ EMC+ AA +RD++
Sbjct 288 ARSSDGFSGSDLKEMCRDAALLCVRDSV 315
Lambda K H
0.311 0.129 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2059772308
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40