bitscore colors: <40, 40-50 , 50-80, 80-200, >200




           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
           164,496 sequences; 82,071,388 total letters



Query=  Eace_1806_orf1
Length=168
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  tgo:TGME49_058150  proteasome subunit alpha type 7, putative (E...   207    2e-53
  cpv:cgd2_1440  proteasome regulatory subunit, NTN hydrolase fol...   198    7e-51
  pfa:MAL13P1.270  proteasome subunit, putative (EC:3.4.25.1); K0...   182    4e-46
  tpv:TP04_0828  proteasome subunit alpha type (EC:3.4.25.1); K02...   175    6e-44
  bbo:BBOV_III009200  17.m07804; proteasome A-type and B-type fam...   169    4e-42
  ath:AT5G66140  PAD2; PAD2 (PROTEASOME ALPHA SUBUNIT D 2); endop...   156    3e-38
  ath:AT3G51260  PAD1; PAD1 (20s proteasome alpha subunit pad1); ...   155    9e-38
  mmu:73677  Psma8, 2410072D24Rik, MGC151367, MGC151369; proteaso...   150    1e-36
  dre:406445  psma8, psma7, zgc:77139; proteasome (prosome, macro...   145    6e-35
  mmu:26444  Psma7, C6-I; proteasome (prosome, macropain) subunit...   144    1e-34
  sce:YOL038W  PRE6; Alpha 4 subunit of the 20S proteasome; may r...   144    2e-34
  hsa:5688  PSMA7, C6, HSPC, MGC3755, RC6-1, XAPC7; proteasome (p...   144    2e-34
  hsa:143471  PSMA8, MGC26605, PSMA7L; proteasome (prosome, macro...   142    4e-34
  xla:394357  psma7-a, hspc, psma4-B, psma7, rc6-1, xapc7; protea...   140    2e-33
  xla:399109  psma7-b, MGC83409, hspc, psma7, rc6-1, xapc7; prote...   140    2e-33
  cel:C36B1.4  pas-4; Proteasome Alpha Subunit family member (pas...   129    4e-30
  xla:399279  psma2, MGC82351; proteasome (prosome, macropain) su...   103    3e-22
  tgo:TGME49_039500  proteasome subunit alpha type 4, subunit (EC...   101    1e-21
  cpv:cgd7_3660  proteasome subunit alpha2, protease of the acyla...   100    2e-21
  hsa:5683  PSMA2, HC3, MU, PMSA2, PSC2; proteasome (prosome, mac...   100    3e-21
  tgo:TGME49_087210  proteasome subunit alpha type 2, putative (E...  99.8    3e-21
  mmu:19166  Psma2, Lmpc3; proteasome (prosome, macropain) subuni...  99.8    4e-21
  ath:AT1G79210  20S proteasome alpha subunit B, putative; K02726...  99.8    4e-21
  ath:AT1G16470  PAB1; PAB1 (PROTEASOME SUBUNIT PAB1); endopeptid...  99.4    5e-21
  dre:403015  Psma2; si:rp71-45k5.4 (EC:3.4.25.1); K02726 20S pro...  98.6    8e-21
  pfa:PFF0420c  proteasome subunit alpha type 2, putative (EC:3.4...  97.8    1e-20
  dre:554153  psma2, wu:faa49c06, wu:fb98h03, zgc:110710; proteas...  97.4    2e-20
  bbo:BBOV_III000310  17.m07053; proteasome A-type and B-type fam...  96.7    3e-20
  bbo:BBOV_III009190  17.m07803; proteasome A-type and B-type fam...  94.4    2e-19
  cpv:cgd4_250  proteasome subunit alpha type 4, NTN hydrolase fo...  94.0    2e-19
  tpv:TP04_0827  proteasome subunit alpha type (EC:3.4.25.1); K02...  94.0    2e-19
  tpv:TP03_0809  proteasome subunit alpha type 2 (EC:3.4.25.1); K...  93.6    3e-19
  sce:YGR135W  PRE9; Alpha 3 subunit of the 20S proteasome, the o...  93.2    4e-19
  sce:YML092C  PRE8; Alpha 2 subunit of the 20S proteasome (EC:3....  91.7    1e-18
  ath:AT3G22110  PAC1; PAC1; endopeptidase/ peptidase/ threonine-...  89.0    6e-18
  pfa:PF13_0282  proteasome subunit, putative (EC:3.4.25.1); K027...  89.0    7e-18
  cel:D1054.2  pas-2; Proteasome Alpha Subunit family member (pas...  88.2    1e-17
  hsa:5685  PSMA4, HC9, HsT17706, MGC111191, MGC12467, MGC24813, ...  82.8    5e-16
  mmu:26441  Psma4, C9; proteasome (prosome, macropain) subunit, ...  81.3    2e-15
  xla:734876  hypothetical protein MGC132180; K02728 20S proteaso...  81.3    2e-15
  dre:326687  psma4, wu:fe05d10, zgc:56176; proteasome (prosome, ...  80.5    3e-15
  xla:380382  psma4, MGC52990; proteasome (prosome, macropain) su...  80.1    3e-15
  cel:Y110A7A.14  pas-3; Proteasome Alpha Subunit family member (...  76.6    4e-14
  ath:AT5G35590  PAA1; PAA1 (PROTEASOME ALPHA SUBUNIT A 1); endop...  71.2    1e-12
  cpv:cgd5_1820  proteasome subunit alpha type 5 ; K02729 20S pro...  71.2    2e-12
  pfa:PF07_0112  proteasome subunit alpha type 5, putative (EC:3....  70.5    3e-12
  ath:AT2G05840  PAA2; PAA2 (20S PROTEASOME SUBUNIT PAA2); endope...  69.3    6e-12
  cel:F25H2.9  pas-5; Proteasome Alpha Subunit family member (pas...  68.9    7e-12
  ath:AT1G53850  PAE1; PAE1; endopeptidase/ peptidase/ threonine-...  68.2    1e-11
  ath:AT3G14290  PAE2; PAE2; endopeptidase/ peptidase/ threonine-...  67.8    2e-11


> tgo:TGME49_058150  proteasome subunit alpha type 7, putative 
(EC:3.4.25.1); K02731 20S proteasome subunit alpha 4 [EC:3.4.25.1]
Length=245

 Score =  207 bits (526),  Expect = 2e-53, Method: Compositional matrix adjust.
 Identities = 94/160 (58%), Positives = 126/160 (78%), Gaps = 0/160 (0%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGLHADARVL+ K ++E QSYRLN  TAP+ DY++++IAQVQQKYTHRGGVRPFGLS L+
Sbjct  74   AGLHADARVLINKTRVECQSYRLNTATAPSVDYISKFIAQVQQKYTHRGGVRPFGLSCLI  133

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISAV  120
            AG + +G++ALYQTEPSGI AKWK  A+GKN +TVQEYLEKNY  D++E+    LA+ A+
Sbjct  134  AGAEHDGSIALYQTEPSGICAKWKGAAMGKNYRTVQEYLEKNYAPDLDEDGAVHLAVGAL  193

Query  121  AEVVEAGKRNVECVIITKTNTEFVSPDKIAQELEKLEAQK  160
             EVVEAG R++E  ++ K    F+  D++ +E +++E+ K
Sbjct  194  MEVVEAGHRHIEVAVVKKEQFYFLDEDRLEKEAQRVESLK  233


> cpv:cgd2_1440  proteasome regulatory subunit, NTN hydrolase fold 
; K02731 20S proteasome subunit alpha 4 [EC:3.4.25.1]
Length=256

 Score =  198 bits (503),  Expect = 7e-51, Method: Compositional matrix adjust.
 Identities = 98/168 (58%), Positives = 129/168 (76%), Gaps = 1/168 (0%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGLHADARVL+ K +LE Q++RLN + AP  DY+AR+ AQ QQKYTHRGGVRPFG+S L+
Sbjct  87   AGLHADARVLVNKIRLECQNFRLNIEDAPPVDYIARFTAQQQQKYTHRGGVRPFGVSTLI  146

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISAV  120
            AGV  +G+  LYQT+PSGI  +WKAQA+G+N+KTVQE+LEKNYK DM +E+T  LAISA+
Sbjct  147  AGVHNDGSPGLYQTDPSGIALEWKAQAVGQNSKTVQEFLEKNYKHDMAKEETINLAISAL  206

Query  121  AEVVEAGKRNVECVIITKTNTEFVSPDKIAQELEKLEAQKKSAEEEVK  168
             EVVE+G RN+E V++ K    F+S ++    +  +E+ K +AE E K
Sbjct  207  LEVVESGSRNMEIVVVDKKGCNFLSDEETDMLVSAIES-KIAAENENK  253


> pfa:MAL13P1.270  proteasome subunit, putative (EC:3.4.25.1); 
K02731 20S proteasome subunit alpha 4 [EC:3.4.25.1]
Length=241

 Score =  182 bits (463),  Expect = 4e-46, Method: Compositional matrix adjust.
 Identities = 84/166 (50%), Positives = 119/166 (71%), Gaps = 0/166 (0%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL+ADARVL+ K +LE Q Y LN D     DY+A+Y+A+VQQK+THRGGVRPFG++ L+
Sbjct  74   AGLNADARVLVNKTRLECQRYYLNMDEPAPVDYIAKYVAKVQQKFTHRGGVRPFGIATLI  133

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISAV  120
            AG      + +YQTEPSGI+A WKAQA+GKNAK VQE+LEKNY+E+M ++D   LA+ A+
Sbjct  134  AGFKNNKEICIYQTEPSGIYAAWKAQAIGKNAKIVQEFLEKNYQENMEQKDCIFLALKAI  193

Query  121  AEVVEAGKRNVECVIITKTNTEFVSPDKIAQELEKLEAQKKSAEEE  166
             EVVE   +NVE  ++T+ +  F+   +I   +E ++ ++    E+
Sbjct  194  FEVVELSSKNVEVALLTEKDLTFIEEQEINSMVELIDQERTKNNEQ  239


> tpv:TP04_0828  proteasome subunit alpha type (EC:3.4.25.1); K02731 
20S proteasome subunit alpha 4 [EC:3.4.25.1]
Length=239

 Score =  175 bits (443),  Expect = 6e-44, Method: Compositional matrix adjust.
 Identities = 81/160 (50%), Positives = 118/160 (73%), Gaps = 0/160 (0%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL+ADARVL  K +LE Q Y+LN D A +  Y+A+YIA++QQKYTH+GGVR FG+S+L+
Sbjct  74   AGLNADARVLANKTRLECQRYKLNMDEAASVGYIAKYIARLQQKYTHKGGVRLFGVSLLI  133

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISAV  120
             G D  G  AL+QTEPSGI++ WKAQ++GKN+K VQEYLEKNYK+D++ ++  +LA+ A+
Sbjct  134  VGFDYNGKPALFQTEPSGIYSSWKAQSIGKNSKHVQEYLEKNYKDDLSSDEAVMLAVKAL  193

Query  121  AEVVEAGKRNVECVIITKTNTEFVSPDKIAQELEKLEAQK  160
             EVVE   +++E  ++     + +    + + +EKL A+K
Sbjct  194  FEVVEVSAKSLELAVLVPGGMKILEESALEKIVEKLNAEK  233


> bbo:BBOV_III009200  17.m07804; proteasome A-type and B-type family 
protein; K02731 20S proteasome subunit alpha 4 [EC:3.4.25.1]
Length=236

 Score =  169 bits (428),  Expect = 4e-42, Method: Compositional matrix adjust.
 Identities = 79/160 (49%), Positives = 112/160 (70%), Gaps = 0/160 (0%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL+ADARVL+ K +LE Q YRLN D   +  Y+A+YIA++QQKYTHRGGVR FG+++L+
Sbjct  74   AGLNADARVLINKTRLECQRYRLNADEVASVGYIAKYIARLQQKYTHRGGVRLFGVALLI  133

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISAV  120
             G D  G   LYQTEPSGI + WKAQ++G+ +K+ QE+LE NYKE MN E++  L+I A+
Sbjct  134  IGYDSNGKPGLYQTEPSGIHSSWKAQSIGRGSKSAQEFLEINYKEGMNVEESVTLSIKAL  193

Query  121  AEVVEAGKRNVECVIITKTNTEFVSPDKIAQELEKLEAQK  160
             EV+E   +N+E  I+  T  + +  + I+  L+ +   K
Sbjct  194  VEVMEVSAKNIEVAILGPTGLQILDEEAISHVLKNINEAK  233


> ath:AT5G66140  PAD2; PAD2 (PROTEASOME ALPHA SUBUNIT D 2); endopeptidase/ 
peptidase/ threonine-type endopeptidase; K02731 
20S proteasome subunit alpha 4 [EC:3.4.25.1]
Length=250

 Score =  156 bits (395),  Expect = 3e-38, Method: Compositional matrix adjust.
 Identities = 77/142 (54%), Positives = 103/142 (72%), Gaps = 2/142 (1%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL ADARVL+ KA++E QS+RL  +   T +Y+ RYIA +QQKYT  GGVRPFGLS L+
Sbjct  75   AGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLI  134

Query  61   AGVDLEGNL-ALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISA  119
             G D    L +LYQT+PSG F+ WKA A G+N+ +++E+LEKNYKE   +E T  LAI A
Sbjct  135  VGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESSGQE-TIKLAIRA  193

Query  120  VAEVVEAGKRNVECVIITKTNT  141
            + EVVE+G +N+E  ++T+  T
Sbjct  194  LLEVVESGGKNIEVAVMTREET  215


> ath:AT3G51260  PAD1; PAD1 (20s proteasome alpha subunit pad1); 
endopeptidase/ peptidase/ threonine-type endopeptidase; K02731 
20S proteasome subunit alpha 4 [EC:3.4.25.1]
Length=243

 Score =  155 bits (391),  Expect = 9e-38, Method: Compositional matrix adjust.
 Identities = 76/139 (54%), Positives = 102/139 (73%), Gaps = 2/139 (1%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL ADARVL+ KA++E QS+RL  +   T +Y+ RYIA +QQKYT  GGVRPFGLS L+
Sbjct  75   AGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLI  134

Query  61   AGVDLEGNL-ALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISA  119
             G D    + ALYQT+PSG F+ WKA A G+N+ +++E+LEKNYKE   +E T  LAI A
Sbjct  135  VGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESAGQE-TVKLAIRA  193

Query  120  VAEVVEAGKRNVECVIITK  138
            + EVVE+G +N+E  ++T+
Sbjct  194  LLEVVESGGKNIEVAVMTR  212


> mmu:73677  Psma8, 2410072D24Rik, MGC151367, MGC151369; proteasome 
(prosome, macropain) subunit, alpha type, 8 (EC:3.4.25.1); 
K02731 20S proteasome subunit alpha 4 [EC:3.4.25.1]
Length=250

 Score =  150 bits (380),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 76/168 (45%), Positives = 116/168 (69%), Gaps = 3/168 (1%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL ADARV++++A++E QS++L  +   T +Y+ R+IA ++QKYT   G RPFG+S L+
Sbjct  76   AGLTADARVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALI  135

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDM--NEEDTFLLAIS  118
             G D +G   LYQT+PSG +  WKA A+G++AKTV+E+LEKNY ED   N+++   LAI 
Sbjct  136  VGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIK  195

Query  119  AVAEVVEAGKRNVECVIITKTNT-EFVSPDKIAQELEKLEAQKKSAEE  165
            A+ EVV++G +N+E  II +    +  S  +I  E+ ++E +K  AE+
Sbjct  196  ALLEVVQSGGKNIELAIIRRDQPLKMFSAKEIELEVSEIEREKDEAEK  243


> dre:406445  psma8, psma7, zgc:77139; proteasome (prosome, macropain) 
subunit, alpha type, 8 (EC:3.4.25.1); K02731 20S proteasome 
subunit alpha 4 [EC:3.4.25.1]
Length=251

 Score =  145 bits (366),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 73/162 (45%), Positives = 110/162 (67%), Gaps = 9/162 (5%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL ADAR+++ +A++E QS+RL  +   T +Y+ RYIA ++Q+YT   G RPFG+S L+
Sbjct  76   AGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALI  135

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKED--MNEEDTFLLAIS  118
             G D +G   LYQT+PSG +  WKA A+G++AKTV+E+LEKNY ++   ++ D   LAI 
Sbjct  136  VGFDYDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIK  195

Query  119  AVAEVVEAGKRNVECVIITKTNTEFVSPDKI--AQELEKLEA  158
            A+ EVV++G +N+E  +I +       P KI  ++E+E L A
Sbjct  196  ALLEVVQSGGKNIELAVIRRNQ-----PLKILESKEIETLVA  232


> mmu:26444  Psma7, C6-I; proteasome (prosome, macropain) subunit, 
alpha type 7 (EC:3.4.25.1); K02731 20S proteasome subunit 
alpha 4 [EC:3.4.25.1]
Length=248

 Score =  144 bits (364),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 68/152 (44%), Positives = 105/152 (69%), Gaps = 3/152 (1%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL ADAR+++ +A++E QS+RL  +   T +Y+ RYIA ++Q+YT   G RPFG+S L+
Sbjct  74   AGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALI  133

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEED--TFLLAIS  118
             G D +G   LYQT+PSG +  WKA A+G+ AK+V+E+LEKNY +D  E D  T  L I 
Sbjct  134  VGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIK  193

Query  119  AVAEVVEAGKRNVECVIITKTNT-EFVSPDKI  149
            A+ EVV++G +N+E  ++ +    + ++P++I
Sbjct  194  ALLEVVQSGGKNIELAVMRRDQPLKILNPEEI  225


> sce:YOL038W  PRE6; Alpha 4 subunit of the 20S proteasome; may 
replace alpha 3 subunit (Pre9p) under stress conditions to 
create a more active proteasomal isoform; GFP-fusion protein 
relocates from cytosol to the mitochondrial surface upon oxidative 
stress (EC:3.4.25.1); K02731 20S proteasome subunit 
alpha 4 [EC:3.4.25.1]
Length=254

 Score =  144 bits (363),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 70/151 (46%), Positives = 106/151 (70%), Gaps = 9/151 (5%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            +GL+AD+R+L+ KA++E QS+RL  +   T +Y+ RY+A VQQ+YT  GGVRPFG+S L+
Sbjct  76   SGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLI  135

Query  61   AGVDLEGN-LALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNE-----EDTFL  114
            AG D   +   LYQTEPSGI++ W AQ +G+N+KTV+E+LEKNY  D  E     E+   
Sbjct  136  AGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNY--DRKEPPATVEECVK  193

Query  115  LAISAVAEVVEAGKRNVECVIITKTNTEFVS  145
            L + ++ EVV+ G +N+E + + K +++ V+
Sbjct  194  LTVRSLLEVVQTGAKNIE-ITVVKPDSDIVA  223


> hsa:5688  PSMA7, C6, HSPC, MGC3755, RC6-1, XAPC7; proteasome 
(prosome, macropain) subunit, alpha type, 7 (EC:3.4.25.1); K02731 
20S proteasome subunit alpha 4 [EC:3.4.25.1]
Length=248

 Score =  144 bits (362),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 67/152 (44%), Positives = 106/152 (69%), Gaps = 3/152 (1%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL ADAR+++ +A++E QS+RL  +   T +Y+ RYIA ++Q+YT   G RPFG+S L+
Sbjct  74   AGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALI  133

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEED--TFLLAIS  118
             G D +G   LYQT+PSG +  WKA A+G+ AK+V+E+LEKNY ++  E D  T  L I 
Sbjct  134  VGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIK  193

Query  119  AVAEVVEAGKRNVECVIITKTNT-EFVSPDKI  149
            A+ EVV++G +N+E  ++ +  + + ++P++I
Sbjct  194  ALLEVVQSGGKNIELAVMRRDQSLKILNPEEI  225


> hsa:143471  PSMA8, MGC26605, PSMA7L; proteasome (prosome, macropain) 
subunit, alpha type, 8 (EC:3.4.25.1); K02731 20S proteasome 
subunit alpha 4 [EC:3.4.25.1]
Length=250

 Score =  142 bits (359),  Expect = 4e-34, Method: Compositional matrix adjust.
 Identities = 69/140 (49%), Positives = 99/140 (70%), Gaps = 2/140 (1%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL ADARV++ +A++E QS++L  +   T +Y+ R+IA ++QKYT   G RPFG+S L+
Sbjct  76   AGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALI  135

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDT--FLLAIS  118
             G D +G   LYQT+PSG +  WKA A+G++AKTV+E+LEKNY ED    D+    LAI 
Sbjct  136  VGFDDDGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIK  195

Query  119  AVAEVVEAGKRNVECVIITK  138
            A+ EVV++G +N+E  II +
Sbjct  196  ALLEVVQSGGKNIELAIIRR  215


> xla:394357  psma7-a, hspc, psma4-B, psma7, rc6-1, xapc7; proteasome 
(prosome, macropain) subunit, alpha type, 7 (EC:3.4.25.1); 
K02731 20S proteasome subunit alpha 4 [EC:3.4.25.1]
Length=248

 Score =  140 bits (354),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 105/152 (69%), Gaps = 3/152 (1%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL ADAR+++ +A++E QS+RL  +   T +Y+ RYIA ++Q+YT   G RPFG+S L+
Sbjct  74   AGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALI  133

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEED--TFLLAIS  118
             G D +G   LYQT+PSG +  WKA A+G+ AK+V+E+LEK+Y ++  E D  T  L I 
Sbjct  134  VGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIK  193

Query  119  AVAEVVEAGKRNVECVIITKTNT-EFVSPDKI  149
            A+ EVV++G +N+E  ++ +    + ++P++I
Sbjct  194  ALLEVVQSGGKNIELAVMRRDQPLKILNPEEI  225


> xla:399109  psma7-b, MGC83409, hspc, psma7, rc6-1, xapc7; proteasome 
(prosome, macropain) subunit, alpha type, 7 (EC:3.4.25.1); 
K02731 20S proteasome subunit alpha 4 [EC:3.4.25.1]
Length=247

 Score =  140 bits (354),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 66/152 (43%), Positives = 105/152 (69%), Gaps = 3/152 (1%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL ADAR+++ +A++E QS+RL  +   T +Y+ RYIA ++Q+YT   G RPFG+S L+
Sbjct  74   AGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALI  133

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEED--TFLLAIS  118
             G D +G   LYQT+PSG +  WKA A+G+ AK+V+E+LEK+Y ++  E D  T  L I 
Sbjct  134  VGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIK  193

Query  119  AVAEVVEAGKRNVECVIITKTNT-EFVSPDKI  149
            A+ EVV++G +N+E  ++ +    + ++P++I
Sbjct  194  ALLEVVQSGGKNIELAVMRRDQPLKILNPEEI  225


> cel:C36B1.4  pas-4; Proteasome Alpha Subunit family member (pas-4); 
K02731 20S proteasome subunit alpha 4 [EC:3.4.25.1]
Length=253

 Score =  129 bits (325),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 62/145 (42%), Positives = 96/145 (66%), Gaps = 2/145 (1%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL ADARVL+ +A++E QSY+L  +   T  Y++RYIA  +Q++T   G RPFG+S+L+
Sbjct  75   AGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLI  134

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKED--MNEEDTFLLAIS  118
             G D +G   L++TEPSG + ++ A A G+  K V+EYLE+ Y E+  ++E  T  L + 
Sbjct  135  GGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEATTLKLVVK  194

Query  119  AVAEVVEAGKRNVECVIITKTNTEF  143
            ++A+VV  G +N+E  ++ K N E 
Sbjct  195  SLAQVVPPGSQNIEIAVMKKVNDEL  219


> xla:399279  psma2, MGC82351; proteasome (prosome, macropain) 
subunit, alpha type, 2 (EC:3.4.25.1); K02726 20S proteasome 
subunit alpha 2 [EC:3.4.25.1]
Length=234

 Score =  103 bits (256),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 91/156 (58%), Gaps = 5/156 (3%)

Query  1    AGLHADARVLLAKAQ-LEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVL  59
            +G+  D RVL+ +A+ L  Q Y +  +  PTA  + R +A V Q+YT  GGVRPFG+S+L
Sbjct  77   SGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQR-VASVMQEYTQSGGVRPFGVSLL  135

Query  60   LAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISA  119
            +AG D EG   L+Q++PSG +  WKA A+GKN    + +LEK Y ED+  ED    AI  
Sbjct  136  IAGWD-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILT  194

Query  120  VAEVVEA--GKRNVECVIITKTNTEFVSPDKIAQEL  153
            + E  E    + N+E  I  +   + ++P ++   L
Sbjct  195  LKESFEGQMTEDNIEVGICNEAGFKRLTPAEVKDYL  230


> tgo:TGME49_039500  proteasome subunit alpha type 4, subunit (EC:3.4.25.1); 
K02728 20S proteasome subunit alpha 3 [EC:3.4.25.1]
Length=252

 Score =  101 bits (252),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 91/168 (54%), Gaps = 3/168 (1%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL ADA +L+ +A+L GQ Y    D     + +   I  V+Q YT  GG+RPFG+S L 
Sbjct  77   AGLTADANILINQARLTGQRYLYAYDEPQPIEQLVLQICDVKQSYTQFGGLRPFGVSFLF  136

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISAV  120
            AG D      LY T+PSG ++ WKA A+G N+++ Q  L++ +KED++ +   LLA   +
Sbjct  137  AGWDRHYGFQLYHTDPSGNYSGWKATAIGVNSQSAQSILKQEWKEDLDVDGALLLAAKVL  196

Query  121  AEVVEAGKRNVECVIITKTNTEFVSPDKIAQEL---EKLEAQKKSAEE  165
             + ++      + + I     +     ++ Q L   E++ A  K A+E
Sbjct  197  NKTMDTAAPTADKLEIAIVRKDPADDSRLIQRLLSNEEVTALIKKAQE  244


> cpv:cgd7_3660  proteasome subunit alpha2, protease of the acylase 
family and NTN hydrolase fold ; K02726 20S proteasome subunit 
alpha 2 [EC:3.4.25.1]
Length=283

 Score =  100 bits (250),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 92/164 (56%), Gaps = 11/164 (6%)

Query  1    AGLHADARVLLAK----AQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGL  56
            AG+ AD RV+L K    AQ+   +YR   +  P  + + R IA V Q++T  GGVRPFG+
Sbjct  124  AGMPADFRVILKKSRKIAQVYYNTYR---EQIPVCE-LVREIATVMQEFTQSGGVRPFGI  179

Query  57   SVLLAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLA  116
            S+L+AG D      L+Q +PSG +  WKA A+GK+ +  + +LEK Y  D+  ED    A
Sbjct  180  SLLVAGFDSTRGPQLFQVDPSGAYFGWKASAIGKDMQNAKSFLEKRYNPDVEIEDALHTA  239

Query  117  ISAVAEVVEAG--KRNVECVIITKT-NTEFVSPDKIAQELEKLE  157
            +  + E  E    + N+E  II +  N   +SP +I   L ++E
Sbjct  240  LLTLKECFEGAMNEDNIEVGIIGEDKNFTILSPQEIKDYLGEVE  283


> hsa:5683  PSMA2, HC3, MU, PMSA2, PSC2; proteasome (prosome, macropain) 
subunit, alpha type, 2 (EC:3.4.25.1); K02726 20S proteasome 
subunit alpha 2 [EC:3.4.25.1]
Length=234

 Score =  100 bits (248),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 89/156 (57%), Gaps = 5/156 (3%)

Query  1    AGLHADARVLLAKAQ-LEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVL  59
            +G+  D RVL+ +A+ L  Q Y +  +  PTA  + R +A V Q+YT  GGVRPFG+S+L
Sbjct  77   SGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQR-VASVMQEYTQSGGVRPFGVSLL  135

Query  60   LAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISA  119
            + G + EG   L+Q++PSG +  WKA A+GKN    + +LEK Y ED+  ED    AI  
Sbjct  136  ICGWN-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILT  194

Query  120  VAEVVEA--GKRNVECVIITKTNTEFVSPDKIAQEL  153
            + E  E    + N+E  I  +     ++P ++   L
Sbjct  195  LKESFEGQMTEDNIEVGICNEAGFRRLTPTEVKDYL  230


> tgo:TGME49_087210  proteasome subunit alpha type 2, putative 
(EC:3.4.25.1); K02726 20S proteasome subunit alpha 2 [EC:3.4.25.1]
Length=236

 Score = 99.8 bits (247),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 91/160 (56%), Gaps = 4/160 (2%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AG+ AD RV++ K + E  +Y L  ++  +   + + +A V Q+YT  GGVRPFGLS+L+
Sbjct  78   AGMPADYRVVMKKGRKEAAAYNLFYNSPISVSQLVQDVAAVMQEYTQSGGVRPFGLSLLV  137

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISAV  120
            AG D  G   LYQ +PSG +  WKA A+G++ +  + +LEK Y  D+  ED    AI  +
Sbjct  138  AGYDEYGP-QLYQVDPSGAYFGWKASAIGRDMQNAKTFLEKRYNPDIELEDAIHTAILTL  196

Query  121  AEVVEAG--KRNVECVIITKTNT-EFVSPDKIAQELEKLE  157
             E  E    + N+E  ++ +      ++P +I   L ++E
Sbjct  197  KEGFEGAMNEHNIEIGVVGEDRKFRILTPAEIKDYLGEVE  236


> mmu:19166  Psma2, Lmpc3; proteasome (prosome, macropain) subunit, 
alpha type 2 (EC:3.4.25.1); K02726 20S proteasome subunit 
alpha 2 [EC:3.4.25.1]
Length=234

 Score = 99.8 bits (247),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 89/156 (57%), Gaps = 5/156 (3%)

Query  1    AGLHADARVLLAKAQ-LEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVL  59
            +G+  D RVL+ +A+ L  Q Y +  +  PTA  + R +A V Q+YT  GGVRPFG+S+L
Sbjct  77   SGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQR-VASVMQEYTQSGGVRPFGVSLL  135

Query  60   LAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISA  119
            + G + EG   L+Q++PSG +  WKA A+GKN    + +LEK Y ED+  ED    AI  
Sbjct  136  ICGWN-EGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILT  194

Query  120  VAEVVEA--GKRNVECVIITKTNTEFVSPDKIAQEL  153
            + E  E    + N+E  I  +     ++P ++   L
Sbjct  195  LKESFEGQMTEDNIEVGICNEAGFRRLTPTEVRDYL  230


> ath:AT1G79210  20S proteasome alpha subunit B, putative; K02726 
20S proteasome subunit alpha 2 [EC:3.4.25.1]
Length=235

 Score = 99.8 bits (247),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 79/136 (58%), Gaps = 5/136 (3%)

Query  1    AGLHADARVLLAKAQLEGQSY-RLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVL  59
            +G+  D RVL+ K++ + + Y RL  +  P    + R  A V Q++T  GGVRPFG+S+L
Sbjct  77   SGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQ-LVRETATVMQEFTQSGGVRPFGVSLL  135

Query  60   LAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISA  119
            +AG D +G   LYQ +PSG +  WKA A+GKN    + +LEK Y EDM  +D    AI  
Sbjct  136  VAGYDDKGP-QLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILT  194

Query  120  VAEVVEA--GKRNVEC  133
            + E  E     +N+E 
Sbjct  195  LKEGFEGEISSKNIEI  210


> ath:AT1G16470  PAB1; PAB1 (PROTEASOME SUBUNIT PAB1); endopeptidase/ 
peptidase/ threonine-type endopeptidase; K02726 20S proteasome 
subunit alpha 2 [EC:3.4.25.1]
Length=235

 Score = 99.4 bits (246),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 79/136 (58%), Gaps = 5/136 (3%)

Query  1    AGLHADARVLLAKAQLEGQSY-RLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVL  59
            +G+  D RVL+ K++ + + Y RL  +  P    + R  A V Q++T  GGVRPFG+S+L
Sbjct  77   SGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQ-LVRETATVMQEFTQSGGVRPFGVSLL  135

Query  60   LAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISA  119
            +AG D +G   LYQ +PSG +  WKA A+GKN    + +LEK Y EDM  +D    AI  
Sbjct  136  VAGYDDKGP-QLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILT  194

Query  120  VAEVVEA--GKRNVEC  133
            + E  E     +N+E 
Sbjct  195  LKEGFEGEISSKNIEI  210


> dre:403015  Psma2; si:rp71-45k5.4 (EC:3.4.25.1); K02726 20S proteasome 
subunit alpha 2 [EC:3.4.25.1]
Length=234

 Score = 98.6 bits (244),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 87/156 (55%), Gaps = 5/156 (3%)

Query  1    AGLHADARVLLAKAQLEGQSYRL-NNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVL  59
            +G+  D RVL+ +A+   Q Y L   +  PT   + R +A V Q+YT  GGVRPFG+S+L
Sbjct  77   SGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQR-VASVMQEYTQSGGVRPFGVSLL  135

Query  60   LAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISA  119
            +AG D E    L+Q++PSG +  WKA A+GKN    + +LEK Y ED+  ED    AI  
Sbjct  136  IAGWD-EDRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILT  194

Query  120  VAEVVEA--GKRNVECVIITKTNTEFVSPDKIAQEL  153
            + E  E    + N+E  I  +     +SP ++   L
Sbjct  195  LKESFEGQMTEDNIEVGICNEAGFRRLSPAEVKDYL  230


> pfa:PFF0420c  proteasome subunit alpha type 2, putative (EC:3.4.25.1); 
K02726 20S proteasome subunit alpha 2 [EC:3.4.25.1]
Length=235

 Score = 97.8 bits (242),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 76/134 (56%), Gaps = 3/134 (2%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AG+  D RVLL +A+ E   Y L   +      + + IA + Q++T  GGVRPFGLS+L+
Sbjct  77   AGMPGDFRVLLKRARKEAIRYSLQYGSEILVKELVKIIASIVQEFTQTGGVRPFGLSLLI  136

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISAV  120
             GVD+ G   LYQ +PSG +  W A  +GK+ +    +LEK Y +D+  ED    AI  +
Sbjct  137  CGVDVYG-YHLYQIDPSGCYFNWMATCVGKDYQNNMSFLEKRYNKDIEIEDAIHTAILTL  195

Query  121  AEVVEA--GKRNVE  132
             E  E    ++N+E
Sbjct  196  KESYEGVLNEKNIE  209


> dre:554153  psma2, wu:faa49c06, wu:fb98h03, zgc:110710; proteasome 
(prosome, macropain) subunit, alpha type, 2 (EC:3.4.25.1); 
K02726 20S proteasome subunit alpha 2 [EC:3.4.25.1]
Length=234

 Score = 97.4 bits (241),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 87/156 (55%), Gaps = 5/156 (3%)

Query  1    AGLHADARVLLAKAQLEGQSYRL-NNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVL  59
            +G+  D RVL+ +A+   Q Y L   +  PT   + R +A V Q+YT  GGVRPFG+S+L
Sbjct  77   SGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQR-VASVMQEYTQSGGVRPFGVSLL  135

Query  60   LAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISA  119
            +AG D E    L+Q++PSG +  WKA A+GKN    + +LEK Y ED+  ED    AI  
Sbjct  136  IAGWD-EDRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILT  194

Query  120  VAEVVEA--GKRNVECVIITKTNTEFVSPDKIAQEL  153
            + E  E    + N+E  I  +     ++P ++   L
Sbjct  195  LKESFEGQMTEDNIEVGICNEAGFRRLTPAEVKDYL  230


> bbo:BBOV_III000310  17.m07053; proteasome A-type and B-type family 
protein; K02726 20S proteasome subunit alpha 2 [EC:3.4.25.1]
Length=236

 Score = 96.7 bits (239),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 5/139 (3%)

Query  1    AGLHADARVLLAKAQLEGQSYRL-NNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVL  59
            AG+ AD R++L K + +   Y+L   D  P A+ + + +A + Q+YTH GGVRPFG+S+L
Sbjct  78   AGMPADFRIVLKKGRKQAIKYKLLYGDDIPGAE-LVKEVASIMQEYTHSGGVRPFGISLL  136

Query  60   LAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISA  119
            LA  D +G   LYQ +PSG +  W+A A+G   +    +LEK Y  D+  ED   +AI  
Sbjct  137  LASYDSDGP-QLYQIDPSGAYFGWRATAIGDRMQNNMTFLEKRYNPDLELEDAIHIAILT  195

Query  120  VAEVVEA--GKRNVECVII  136
            + E  E      N+E  I+
Sbjct  196  LKEGFEGEMTTDNIEIGIV  214


> bbo:BBOV_III009190  17.m07803; proteasome A-type and B-type family 
protein; K02728 20S proteasome subunit alpha 3 [EC:3.4.25.1]
Length=257

 Score = 94.4 bits (233),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 12/176 (6%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL ADA VL+   +L  Q +R         +     I  ++Q YT  GG+RPFG+S L 
Sbjct  77   AGLTADATVLINTCKLYAQRHRYAYGEPQDVEQHVVQICNLKQSYTQFGGLRPFGVSFLF  136

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISAV  120
            AG D      LY T+PSG ++ WKA A+G N++  Q  L + +KE MN ++   LA+  +
Sbjct  137  AGWDSHLGFQLYHTDPSGNYSGWKATAIGHNSQPAQSMLRQEWKEGMNLDEALYLAVKVL  196

Query  121  AEVVEAGKRNVECVII----------TKTNTEFVSPDKIAQELEKL--EAQKKSAE  164
             + +++     + + +           +   E VS  ++A+ L KL  EA  K+ E
Sbjct  197  TKSMDSTMPKADKIEVGMLWRGPNGDGEPTVEMVSESRVAEILSKLTDEAAAKAVE  252


> cpv:cgd4_250  proteasome subunit alpha type 4, NTN hydrolase 
fold ; K02728 20S proteasome subunit alpha 3 [EC:3.4.25.1]
Length=271

 Score = 94.0 bits (232),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 11/174 (6%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL ADA +L+A+A+++ Q Y+         + +   I   +Q YT  GG+RPFG+S L 
Sbjct  87   AGLTADANILIAQARIDSQRYQYTYGEEQPVEQLVTQICDRKQSYTQFGGLRPFGVSFLF  146

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISAV  120
            AG D      LYQ++PSG F+ WKA A+G+N +T    L++ + ED+  E    L    +
Sbjct  147  AGYDKNYGYQLYQSDPSGNFSGWKATAIGQNNQTATSLLKQEWNEDLTLEQGLHLVAKVL  206

Query  121  AEVVEAGKRN---VECVIITKTN------TEFVSPDKIAQELEKLEAQKKSAEE  165
             + ++         E  I+T  N       + +S  +I + LEK+  QK+ A E
Sbjct  207  TKTMDTTSPTADKFEFSILTHNNESNKCSQKILSEKEIGELLEKV--QKEIASE  258


> tpv:TP04_0827  proteasome subunit alpha type (EC:3.4.25.1); K02728 
20S proteasome subunit alpha 3 [EC:3.4.25.1]
Length=254

 Score = 94.0 bits (232),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 4/172 (2%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AGL ADA VL+   +L  Q +R +     + +     I  ++Q YT  GG+RPFG+S L 
Sbjct  77   AGLTADANVLINMCKLYAQRHRYSYGEPQSIEQHIIQICDLKQSYTQFGGLRPFGVSFLF  136

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISAV  120
             G D      LY T+PSG ++ WKA A+G N+++ Q  L++ +KED+  E    LAI  +
Sbjct  137  GGWDENLGFQLYHTDPSGNYSGWKATAIGMNSQSAQSILKQEWKEDLTLEQAVRLAIRVL  196

Query  121  AEVVEAGKRN---VECVIITKTNTEFVSPDKIAQELEKLEAQKKS-AEEEVK  168
             + +++       +E  +++K  T    P       +K++   KS A+E+VK
Sbjct  197  TKAMDSSTPQADKIEVGVLSKGETGEFEPFVEMLNNDKVDTLLKSIAQEDVK  248


> tpv:TP03_0809  proteasome subunit alpha type 2 (EC:3.4.25.1); 
K02726 20S proteasome subunit alpha 2 [EC:3.4.25.1]
Length=240

 Score = 93.6 bits (231),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 82/155 (52%), Gaps = 17/155 (10%)

Query  1    AGLHADARVLLAKAQLE----GQSYR-LNNDTAPTADYMARYIAQVQQKYTHRGGVRPFG  55
            AG+ AD RV+L K + E       Y+ +  D  P A  + + +A + Q++TH GGVRPFG
Sbjct  78   AGMPADFRVVLKKGRKEVDNTAMKYKAMYGDDIPGAQ-LVKDVASIMQEFTHSGGVRPFG  136

Query  56   LSVLLAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLL  115
            +S+LLA  D +G   LYQ +PSG F  WKA A+G   +    +LEK Y  D+  ED   +
Sbjct  137  ISLLLASYDDDGP-QLYQIDPSGAFFGWKATAIGNRMQNNNTFLEKRYHPDLELEDAIHI  195

Query  116  AISAVAEVVEA--GKRNVECVIITKTNTEFVSPDK  148
            AI  + E  E      N+E  +        V PDK
Sbjct  196  AILTLKEGFEGELTSENIEIGV--------VGPDK  222


> sce:YGR135W  PRE9; Alpha 3 subunit of the 20S proteasome, the 
only nonessential 20S subunit; may be replaced by the alpha 
4 subunit (Pre6p) under stress conditions to create a more 
active proteasomal isoform (EC:3.4.25.1); K02728 20S proteasome 
subunit alpha 3 [EC:3.4.25.1]
Length=258

 Score = 93.2 bits (230),  Expect = 4e-19, Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 75/127 (59%), Gaps = 2/127 (1%)

Query  1    AGLHADARVLLAKAQLEGQSY-RLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVL  59
            AGL ADA +L+  A++  Q+Y +  N+  P  + + R ++ ++Q YT  GG+RPFG+S +
Sbjct  78   AGLTADAEILINTARIHAQNYLKTYNEDIP-VEILVRRLSDIKQGYTQHGGLRPFGVSFI  136

Query  60   LAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISA  119
             AG D      LY + PSG +  WKA ++G N    Q  L+ +YK+DM  +D   LA+  
Sbjct  137  YAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKT  196

Query  120  VAEVVEA  126
            +++  ++
Sbjct  197  LSKTTDS  203


> sce:YML092C  PRE8; Alpha 2 subunit of the 20S proteasome (EC:3.4.25.1); 
K02726 20S proteasome subunit alpha 2 [EC:3.4.25.1]
Length=250

 Score = 91.7 bits (226),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 9/168 (5%)

Query  1    AGLHADARVLLAKAQ-LEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVL  59
            +G+  D RVL+ K++ +   SY+      P    +   +A++ Q+ T  GGVRPFG+S+L
Sbjct  76   SGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLL  135

Query  60   LAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISA  119
            +AG D     +LYQ +PSG +  WKA A+GK +   + +LEK + +++  ED   +A+  
Sbjct  136  IAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELELEDAIHIALLT  195

Query  120  VAEVVEAGKRN---VECVIITKTNTEFVS----PDKIAQELEKLEAQK  160
            + E VE G+ N   +E  II   N + +     P        KL +Q+
Sbjct  196  LKESVE-GEFNGDTIELAIIGDENPDLLGYTGIPTDKGPRFRKLTSQE  242


> ath:AT3G22110  PAC1; PAC1; endopeptidase/ peptidase/ threonine-type 
endopeptidase; K02728 20S proteasome subunit alpha 3 
[EC:3.4.25.1]
Length=250

 Score = 89.0 bits (219),  Expect = 6e-18, Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 0/126 (0%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AG+ +DA +L+  A+++ Q Y          + + + +   +Q YT  GG+RPFG+S L 
Sbjct  77   AGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLF  136

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISAV  120
            AG D      LY ++PSG +  WKA A+G N +  Q  L+++YK+D   E+   LA+  +
Sbjct  137  AGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELALKVL  196

Query  121  AEVVEA  126
             + +++
Sbjct  197  TKTMDS  202


> pfa:PF13_0282  proteasome subunit, putative (EC:3.4.25.1); K02728 
20S proteasome subunit alpha 3 [EC:3.4.25.1]
Length=246

 Score = 89.0 bits (219),  Expect = 7e-18, Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 2/112 (1%)

Query  1    AGLHADARVLLAKAQLEGQSYRLN-NDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVL  59
            AGL+ADA +L+ +++L  Q Y  N N+  P +  + + I  ++Q YT  GG+RP+G+S L
Sbjct  77   AGLNADANILINQSRLYAQRYLYNYNEVQPVSQLVVQ-ICDIKQSYTQYGGLRPYGVSFL  135

Query  60   LAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEED  111
            + G D +    LY T+PSG ++ W A A+G N  T    L++ +K DM  E+
Sbjct  136  IGGYDTKDGYQLYHTDPSGNYSGWFATAIGTNNLTASSVLKQEWKNDMTLEE  187


> cel:D1054.2  pas-2; Proteasome Alpha Subunit family member (pas-2); 
K02726 20S proteasome subunit alpha 2 [EC:3.4.25.1]
Length=231

 Score = 88.2 bits (217),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 5/160 (3%)

Query  1    AGLHADARVLLAKAQLEGQSYRLN-NDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVL  59
            +G+  D R+L+ KA+     Y +   +  PT   +   IA V Q+YT  GGVRPFG S+L
Sbjct  73   SGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTD-IAAVMQEYTQSGGVRPFGASLL  131

Query  60   LAGVDLE-GNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAIS  118
            +AG D   G   L+Q +PSG +  WKA ALGKN    + +LEK + E +  +D    A+ 
Sbjct  132  IAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFSEALELDDGIHTALL  191

Query  119  AVAEVVEAG--KRNVECVIITKTNTEFVSPDKIAQELEKL  156
             + E  + G  + NVE  +   T    ++  ++   L  L
Sbjct  192  TLRESFDVGMNENNVEVAVCNSTGFHRLTKQQVHDHLGTL  231


> hsa:5685  PSMA4, HC9, HsT17706, MGC111191, MGC12467, MGC24813, 
PSC9; proteasome (prosome, macropain) subunit, alpha type, 
4 (EC:3.4.25.1); K02728 20S proteasome subunit alpha 3 [EC:3.4.25.1]
Length=261

 Score = 82.8 bits (203),  Expect = 5e-16, Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 4/160 (2%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AG+ +DA VL  + +L  Q Y L        + +   +  ++Q YT  GG RPFG+S+L 
Sbjct  77   AGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLY  136

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKE-DMNEEDTFLLAISA  119
             G D      LYQ++PSG +  WKA  +G N+      L+++YKE +M  +    LAI  
Sbjct  137  IGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKV  196

Query  120  VAEVVEAGKRN---VECVIITKTNTEFVSPDKIAQELEKL  156
            + + ++  K +   VE   +T+ N + V      +E+E+L
Sbjct  197  LNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQL  236


> mmu:26441  Psma4, C9; proteasome (prosome, macropain) subunit, 
alpha type 4 (EC:3.4.25.1); K02728 20S proteasome subunit 
alpha 3 [EC:3.4.25.1]
Length=261

 Score = 81.3 bits (199),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 1/143 (0%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AG+ +DA VL  + +L  Q Y L        + +   +  ++Q YT  GG RPFG+S+L 
Sbjct  77   AGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLY  136

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKE-DMNEEDTFLLAISA  119
             G D      LYQ++PSG +  WKA  +G N+      L+++YKE +M  +    LA+  
Sbjct  137  IGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAVKV  196

Query  120  VAEVVEAGKRNVECVIITKTNTE  142
            + + ++  K + E V I     E
Sbjct  197  LNKTMDVSKLSAEKVEIATLTRE  219


> xla:734876  hypothetical protein MGC132180; K02728 20S proteasome 
subunit alpha 3 [EC:3.4.25.1]
Length=261

 Score = 81.3 bits (199),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 4/144 (2%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AG+ +DA VL  + +L  Q Y L        + +   +  ++Q YT  GG RPFG+S+L 
Sbjct  77   AGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLY  136

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKE-DMNEEDTFLLAISA  119
             G D      LYQ++PSG +  WKA  +G N+      L+++YKE +M  +    LA+  
Sbjct  137  IGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAVKV  196

Query  120  VAEVVEAGKRN---VECVIITKTN  140
            + + ++  K +   VE   +T+ N
Sbjct  197  LNKTMDVSKLSAEKVELATLTREN  220


> dre:326687  psma4, wu:fe05d10, zgc:56176; proteasome (prosome, 
macropain) subunit, alpha type, 4 (EC:3.4.25.1); K02728 20S 
proteasome subunit alpha 3 [EC:3.4.25.1]
Length=261

 Score = 80.5 bits (197),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 4/144 (2%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AG+ +DA VL  + +L  Q Y L        + +   +  ++Q YT  GG RPFG+S+L 
Sbjct  77   AGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLY  136

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKE-DMNEEDTFLLAISA  119
             G D      LYQ++PSG +  WKA  +G N+      L+++YKE +M       LA+  
Sbjct  137  MGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLSAALALAVKV  196

Query  120  VAEVVEAGKRN---VECVIITKTN  140
            + + ++  K +   VE   +T+ N
Sbjct  197  LNKTMDVSKLSAEKVEIATLTREN  220


> xla:380382  psma4, MGC52990; proteasome (prosome, macropain) 
subunit, alpha type, 4 (EC:3.4.25.1); K02728 20S proteasome 
subunit alpha 3 [EC:3.4.25.1]
Length=261

 Score = 80.1 bits (196),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 4/144 (2%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AG+ +DA VL  + +L  Q Y L        + +   +  ++Q YT  GG RPFG+S+L 
Sbjct  77   AGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLY  136

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKE-DMNEEDTFLLAISA  119
             G D      LYQ++PSG +  WKA  +G N+      L+++YKE  M  +    LA+  
Sbjct  137  IGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGGMTLKSALALAVKV  196

Query  120  VAEVVEAGKRN---VECVIITKTN  140
            + + ++  K +   VE   +T+ N
Sbjct  197  LNKTMDVSKLSAEKVELATLTREN  220


> cel:Y110A7A.14  pas-3; Proteasome Alpha Subunit family member 
(pas-3); K02728 20S proteasome subunit alpha 3 [EC:3.4.25.1]
Length=250

 Score = 76.6 bits (187),  Expect = 4e-14, Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 3/158 (1%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLL  60
            AG+ ADA +L+   +    SYR +       + + + +   +Q+YT  GG RPFG+S+L 
Sbjct  77   AGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLY  136

Query  61   AGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAISAV  120
             G D      LYQ++PSG +  WKA  +G N +     L++ YK   N E+   LAI  +
Sbjct  137  IGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSP-NLEEAKQLAIKVL  195

Query  121  AEV--VEAGKRNVECVIITKTNTEFVSPDKIAQELEKL  156
             +   V+     VE  ++T+ + + V  +   +E++ L
Sbjct  196  WKTLDVKLASEKVEMAVLTRRDGKTVLEELTTKEVDAL  233


> ath:AT5G35590  PAA1; PAA1 (PROTEASOME ALPHA SUBUNIT A 1); endopeptidase/ 
peptidase/ threonine-type endopeptidase; K02730 
20S proteasome subunit alpha 1 [EC:3.4.25.1]
Length=246

 Score = 71.2 bits (173),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)

Query  2    GLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLLA  61
            G+ ADAR L+ +A+ +   +R         D +A++IA   Q YT    +RP G+  ++ 
Sbjct  82   GITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVM  141

Query  62   GVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKED--MNEEDTFLLAISA  119
            GVD E    LY+ +P+G F   KA + G   +    +LEK  KE+     ++T   AISA
Sbjct  142  GVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISA  201

Query  120  VAEVVEAGKR--NVECVIITKTNTEF  143
            +  V++   +   +E  ++   N EF
Sbjct  202  LQSVLQEDFKATEIEVGVVRAENPEF  227


> cpv:cgd5_1820  proteasome subunit alpha type 5 ; K02729 20S proteasome 
subunit alpha 5 [EC:3.4.25.1]
Length=255

 Score = 71.2 bits (173),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 77/132 (58%), Gaps = 7/132 (5%)

Query  1    AGLHADARVLLAKAQLEGQSYRLN-NDTAPTADY------MARYIAQVQQKYTHRGGVRP  53
            +GL ADA+ ++  A++E Q+Y    N+  PT         +A   + +++K   +   RP
Sbjct  79   SGLVADAKTMIDHARVESQNYFFTYNENIPTQSVVQSISDLALDFSDIKEKGKKKSMSRP  138

Query  54   FGLSVLLAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTF  113
            FG+++L+AG D +G+ +L+ T+PSG + ++ A A+G   +  +  L +NY  +M+ ++  
Sbjct  139  FGVAMLIAGADSDGSSSLWMTDPSGTYTQYSAAAIGTAQEGAEAILLENYNSNMSLKEAE  198

Query  114  LLAISAVAEVVE  125
             LA+  + +V+E
Sbjct  199  DLALIVLRQVME  210


> pfa:PF07_0112  proteasome subunit alpha type 5, putative (EC:3.4.25.1); 
K02729 20S proteasome subunit alpha 5 [EC:3.4.25.1]
Length=256

 Score = 70.5 bits (171),  Expect = 3e-12, Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 88/169 (52%), Gaps = 12/169 (7%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGV-------RP  53
            +GL ADAR L+  A++E   Y+   +           I+++   +++           RP
Sbjct  79   SGLMADARTLIDYARVECNHYKFIYNENINIKSCVELISELALDFSNLSDSKRKKIMSRP  138

Query  54   FGLSVLLAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTF  113
            FG+++L+ GVD  G   L+ TEPSG   ++ A ++G   +  +  L++NYK+DM  E   
Sbjct  139  FGVALLIGGVDKNGP-CLWYTEPSGTNTRFSAASIGSAQEGAELLLQENYKKDMTFEQAE  197

Query  114  LLAISAVAEVVE--AGKRNVECVIITKTNTEF--VSPDKIAQELEKLEA  158
            +LA++ + +V+E      NVE   I K++  F   + D I++ ++ L +
Sbjct  198  ILALTVLRQVMEDKLSTSNVEICAIKKSDQTFYKYNTDDISRIIDVLPS  246


> ath:AT2G05840  PAA2; PAA2 (20S PROTEASOME SUBUNIT PAA2); endopeptidase/ 
peptidase/ threonine-type endopeptidase; K02730 20S 
proteasome subunit alpha 1 [EC:3.4.25.1]
Length=220

 Score = 69.3 bits (168),  Expect = 6e-12, Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 2/126 (1%)

Query  2    GLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTHRGGVRPFGLSVLLA  61
            G+ AD+R L+ +A+ E   +R        AD +A++IA   Q YT    +RP G+  ++ 
Sbjct  82   GMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVAMVL  141

Query  62   GVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKED--MNEEDTFLLAISA  119
            G+D E    LY+ +P+G F   KA + G   +    +LEK  KE+     ++T   AISA
Sbjct  142  GIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISA  201

Query  120  VAEVVE  125
            +  V++
Sbjct  202  LQSVLQ  207


> cel:F25H2.9  pas-5; Proteasome Alpha Subunit family member (pas-5); 
K02729 20S proteasome subunit alpha 5 [EC:3.4.25.1]
Length=248

 Score = 68.9 bits (167),  Expect = 7e-12, Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 80/145 (55%), Gaps = 7/145 (4%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKY----THRGGVRPFGL  56
            AGL AD+R L+ +AQ+E Q++    +     + + + +A +  ++          RPFG+
Sbjct  79   AGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGV  138

Query  57   SVLLAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLA  116
            ++L AGVD EG   L+  +PSG F   KA+++G  +   ++ L++ Y + +  ++   +A
Sbjct  139  AMLFAGVDQEGA-KLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEGLKMA  197

Query  117  ISAVAEVVE--AGKRNVECVIITKT  139
            ++ + +V+E      NVE V+I  T
Sbjct  198  LAILKQVMEEKLNSANVEVVVIKPT  222


> ath:AT1G53850  PAE1; PAE1; endopeptidase/ peptidase/ threonine-type 
endopeptidase; K02729 20S proteasome subunit alpha 5 
[EC:3.4.25.1]
Length=237

 Score = 68.2 bits (165),  Expect = 1e-11, Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 74/128 (57%), Gaps = 4/128 (3%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTH---RGGVRPFGLS  57
            +GL ADAR L+  A++E Q++R +     T +   + +  +  ++         RPFG+S
Sbjct  79   SGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVS  138

Query  58   VLLAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAI  117
            +L+AG D E   +LY T+PSG F +  A+A+G  ++     L++ + +D++ ++   +A+
Sbjct  139  LLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQEAETIAV  197

Query  118  SAVAEVVE  125
            S + +V+E
Sbjct  198  SILKQVME  205


> ath:AT3G14290  PAE2; PAE2; endopeptidase/ peptidase/ threonine-type 
endopeptidase; K02729 20S proteasome subunit alpha 5 
[EC:3.4.25.1]
Length=237

 Score = 67.8 bits (164),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 73/128 (57%), Gaps = 4/128 (3%)

Query  1    AGLHADARVLLAKAQLEGQSYRLNNDTAPTADYMARYIAQVQQKYTH---RGGVRPFGLS  57
            +GL ADAR L+  A++E Q++R +     T +   + +  +  ++         RPFG+S
Sbjct  79   SGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVS  138

Query  58   VLLAGVDLEGNLALYQTEPSGIFAKWKAQALGKNAKTVQEYLEKNYKEDMNEEDTFLLAI  117
            +L+AG D E   +LY T+PSG F +  A+A+G  ++     L++ + +D+  ++   +A+
Sbjct  139  LLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDITLQEAETIAV  197

Query  118  SAVAEVVE  125
            S + +V+E
Sbjct  198  SILKQVME  205



Lambda     K      H
   0.312    0.128    0.347 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 4157683456


  Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
    Posted date:  Sep 16, 2011  8:45 PM
  Number of letters in database: 82,071,388
  Number of sequences in database:  164,496



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40