bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_1815_orf1
Length=77
Score E
Sequences producing significant alignments: (Bits) Value
sce:YLR441C RPS1A, RP10A; Rps1ap; K02984 small subunit ribosom... 84.0 1e-16
tgo:TGME49_032710 40S ribosomal protein S3a, putative ; K02984... 82.8 3e-16
cpv:cgd4_3160 40S ribosomal protein S3A ; K02984 small subunit... 77.4 1e-14
tpv:TP03_0697 40S ribosomal protein S3A; K02984 small subunit ... 72.4 3e-13
bbo:BBOV_III001480 17.m07150; 40S ribosomal protein S3Ae; K029... 70.9 1e-12
sce:YML063W RPS1B, PLC2, RP10B; Rps1bp; K02984 small subunit r... 68.2 7e-12
ath:AT3G04840 40S ribosomal protein S3A (RPS3aA); K02984 small... 66.6 2e-11
pfa:PFC1020c 40S ribosomal protein S3A, putative; K02984 small... 64.3 8e-11
mmu:668144 Gm9000, EG668144; predicted gene 9000 62.8
xla:100126639 rps3a-b, fte1, mftl; ribosomal protein S3A 62.4 3e-10
ath:AT4G34670 40S ribosomal protein S3A (RPS3aB); K02984 small... 62.4 4e-10
hsa:6189 RPS3A, FTE1, MFTL, MGC23240; ribosomal protein S3A; K... 60.5 1e-09
mmu:20091 Rps3a, MGC102469, MGC117914; ribosomal protein S3A; ... 60.5 1e-09
mmu:100043780 Gm10119; predicted gene 10119 60.1
dre:337240 rps3a, MGC86672, fb02h01, rpS3Ae, wu:fb02h01, zgc:7... 60.1 2e-09
xla:380017 rps3a-a, MGC53968, fte1, mftl, rps3a; ribosomal pro... 59.7 2e-09
cel:F56F3.5 rps-1; Ribosomal Protein, Small subunit family mem... 48.5 5e-06
cel:F09C3.3 fbxb-68; F-box B protein family member (fbxb-68) 28.5 4.8
> sce:YLR441C RPS1A, RP10A; Rps1ap; K02984 small subunit ribosomal
protein S3Ae
Length=255
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 45/53 (84%), Gaps = 0/53 (0%)
Query 19 MAIGKNKRMSKGKKGGKKKVGDPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAG 71
MA+GKNKR+SKGKKG KK+V DPF +KEW+++KAPS F+ RN GKTLV KS G
Sbjct 1 MAVGKNKRLSKGKKGQKKRVVDPFTRKEWFDIKAPSTFENRNVGKTLVNKSTG 53
> tgo:TGME49_032710 40S ribosomal protein S3a, putative ; K02984
small subunit ribosomal protein S3Ae
Length=259
Score = 82.8 bits (203), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/54 (88%), Positives = 51/54 (94%), Gaps = 0/54 (0%)
Query 19 MAIGKNKRMSKGKKGGKKKVGDPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAGT 72
MAIGKNKRMSKGKKGGKKK+GDPFLKKEWY+LKAP+LF RNFGKTLVTKS GT
Sbjct 1 MAIGKNKRMSKGKKGGKKKIGDPFLKKEWYDLKAPTLFNVRNFGKTLVTKSQGT 54
> cpv:cgd4_3160 40S ribosomal protein S3A ; K02984 small subunit
ribosomal protein S3Ae
Length=262
Score = 77.4 bits (189), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/54 (62%), Positives = 46/54 (85%), Gaps = 0/54 (0%)
Query 19 MAIGKNKRMSKGKKGGKKKVGDPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAGT 72
MAIGKNKR+SKG+KGG+KK+ DP +KE+Y+L+APS F+ RNFG T+ +K+ GT
Sbjct 1 MAIGKNKRISKGRKGGRKKIIDPLSRKEFYDLRAPSTFKVRNFGTTIASKNQGT 54
> tpv:TP03_0697 40S ribosomal protein S3A; K02984 small subunit
ribosomal protein S3Ae
Length=262
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 46/54 (85%), Gaps = 0/54 (0%)
Query 19 MAIGKNKRMSKGKKGGKKKVGDPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAGT 72
MA+GKNKR+SKGKKG KKKV DPF +KEWYNLKAP F RNFG+TLVTK+ GT
Sbjct 1 MAVGKNKRVSKGKKGAKKKVIDPFSRKEWYNLKAPVTFNVRNFGQTLVTKTVGT 54
> bbo:BBOV_III001480 17.m07150; 40S ribosomal protein S3Ae; K02984
small subunit ribosomal protein S3Ae
Length=264
Score = 70.9 bits (172), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/54 (75%), Positives = 48/54 (88%), Gaps = 0/54 (0%)
Query 19 MAIGKNKRMSKGKKGGKKKVGDPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAGT 72
MA+GKNKR+SKGKKGGKKK+ DPFLKKEWY LKAP +F RNFG+TLV+K+ GT
Sbjct 1 MAVGKNKRVSKGKKGGKKKIVDPFLKKEWYTLKAPVMFHVRNFGQTLVSKTQGT 54
> sce:YML063W RPS1B, PLC2, RP10B; Rps1bp; K02984 small subunit
ribosomal protein S3Ae
Length=255
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 45/53 (84%), Gaps = 0/53 (0%)
Query 19 MAIGKNKRMSKGKKGGKKKVGDPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAG 71
MA+GKNKR+S+GKKG KKKV DPF +KEW+++KAPS F+ RN GKTLV KS G
Sbjct 1 MAVGKNKRLSRGKKGLKKKVVDPFTRKEWFDIKAPSTFENRNVGKTLVNKSTG 53
> ath:AT3G04840 40S ribosomal protein S3A (RPS3aA); K02984 small
subunit ribosomal protein S3Ae
Length=262
Score = 66.6 bits (161), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/54 (68%), Positives = 47/54 (87%), Gaps = 0/54 (0%)
Query 19 MAIGKNKRMSKGKKGGKKKVGDPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAGT 72
MA+GKNKR+SKG+KGGKKK DPF KK+WY++KAPS+F RN GKTLV+++ GT
Sbjct 1 MAVGKNKRISKGRKGGKKKAVDPFSKKDWYDVKAPSIFTHRNVGKTLVSRTQGT 54
> pfa:PFC1020c 40S ribosomal protein S3A, putative; K02984 small
subunit ribosomal protein S3Ae
Length=262
Score = 64.3 bits (155), Expect = 8e-11, Method: Composition-based stats.
Identities = 41/53 (77%), Positives = 45/53 (84%), Gaps = 0/53 (0%)
Query 19 MAIGKNKRMSKGKKGGKKKVGDPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAG 71
MA+GKNKR SKGKKGGKKKV D F KKEWY+LKAP +F RNFGKTLVTK+ G
Sbjct 1 MAVGKNKRTSKGKKGGKKKVTDVFTKKEWYDLKAPKMFLVRNFGKTLVTKTIG 53
> mmu:668144 Gm9000, EG668144; predicted gene 9000
Length=264
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query 19 MAIGKNKRMSKGKKGGKKK-VGDPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAGT 72
MA+GKNKR++KG K G KK V DPF KK+WY++KAP++F RN GKTLVT++ GT
Sbjct 1 MAVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGT 55
> xla:100126639 rps3a-b, fte1, mftl; ribosomal protein S3A
Length=264
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query 19 MAIGKNKRMSKGKKGGKKK-VGDPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAGT 72
MA+GKNKR++KG K G KK + DPF KK+WY++KAP++F RN GKTLVT++ GT
Sbjct 1 MAVGKNKRLTKGGKKGAKKKIVDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGT 55
> ath:AT4G34670 40S ribosomal protein S3A (RPS3aB); K02984 small
subunit ribosomal protein S3Ae
Length=262
Score = 62.4 bits (150), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 45/54 (83%), Gaps = 0/54 (0%)
Query 19 MAIGKNKRMSKGKKGGKKKVGDPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAGT 72
MA+GKNKR+SKG+KGGKKK DPF KK+WY++KAP F RN GKTLV+++ GT
Sbjct 1 MAVGKNKRISKGRKGGKKKAVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGT 54
> hsa:6189 RPS3A, FTE1, MFTL, MGC23240; ribosomal protein S3A;
K02984 small subunit ribosomal protein S3Ae
Length=264
Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query 19 MAIGKNKRMSKGKKGGKKK-VGDPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAGT 72
MA+GKNKR++KG K G KK V DPF KK+WY++KAP++F RN GKTLVT++ GT
Sbjct 1 MAVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGT 55
> mmu:20091 Rps3a, MGC102469, MGC117914; ribosomal protein S3A;
K02984 small subunit ribosomal protein S3Ae
Length=264
Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query 19 MAIGKNKRMSKGKKGGKKK-VGDPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAGT 72
MA+GKNKR++KG K G KK V DPF KK+WY++KAP++F RN GKTLVT++ GT
Sbjct 1 MAVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGT 55
> mmu:100043780 Gm10119; predicted gene 10119
Length=264
Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query 19 MAIGKNKRMSKGKKGGKKK-VGDPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAGT 72
MA+GKNKR++KG K G KK V DPF KK+WY++KAP++F RN GKTLVT++ GT
Sbjct 1 MAVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGT 55
> dre:337240 rps3a, MGC86672, fb02h01, rpS3Ae, wu:fb02h01, zgc:73195,
zgc:86672; ribosomal protein S3A; K02984 small subunit
ribosomal protein S3Ae
Length=267
Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query 19 MAIGKNKRMSKGKKGGKKK-VGDPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAGT 72
MA+GKNKR++KG K G KK + DPF KK+WY++KAP++F RN GKTLVT++ GT
Sbjct 1 MAVGKNKRLTKGGKKGAKKKIVDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGT 55
> xla:380017 rps3a-a, MGC53968, fte1, mftl, rps3a; ribosomal protein
S3A; K02984 small subunit ribosomal protein S3Ae
Length=264
Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query 19 MAIGKNKRMSKGKKGGKKK-VGDPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAGT 72
MA+GKNKR++KG K G KK + DPF KK+WY++KAP++F RN GKTLVT++ GT
Sbjct 1 MAVGKNKRLTKGGKKGAKKKIVDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGT 55
> cel:F56F3.5 rps-1; Ribosomal Protein, Small subunit family member
(rps-1); K02984 small subunit ribosomal protein S3Ae
Length=257
Score = 48.5 bits (114), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 26/33 (78%), Gaps = 0/33 (0%)
Query 40 DPFLKKEWYNLKAPSLFQQRNFGKTLVTKSAGT 72
DPF +KEWY++KAP++F R GKTL+ ++ GT
Sbjct 21 DPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGT 53
> cel:F09C3.3 fbxb-68; F-box B protein family member (fbxb-68)
Length=327
Score = 28.5 bits (62), Expect = 4.8, Method: Composition-based stats.
Identities = 10/17 (58%), Positives = 15/17 (88%), Gaps = 0/17 (0%)
Query 3 IFSGYPLGLFALSSAKM 19
IF G+P+GLF+ S++KM
Sbjct 161 IFKGFPIGLFSASASKM 177
Lambda K H
0.315 0.132 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2072310352
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40