bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: egene_temp_file_orthology_annotation_similarity_blast_database_966 164,496 sequences; 82,071,388 total letters Query= Eace_2167_orf1 Length=102 Score E Sequences producing significant alignments: (Bits) Value tgo:TGME49_063300 porin, putative ; K15040 voltage-dependent a... 114 1e-25 pfa:PF14_0301 conserved protein, unknown function 50.4 1e-06 tpv:TP01_1012 hypothetical protein 30.4 1.4 eco:b2149 mglA, ECK2142, JW2136, mglP; fused methyl-galactosid... 30.0 1.8 xla:379653 vwa5a, MGC68953, loh11cr2a; von Willebrand factor A... 28.5 5.3 > tgo:TGME49_063300 porin, putative ; K15040 voltage-dependent anion channel protein 2 Length=290 Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 53/102 (51%), Positives = 77/102 (75%), Gaps = 2/102 (1%) Query 1 VSGKLDCAGMKYALGASYTAPTPGLKGGSWVAAVKTAPAGGMMLGKIIGSLNGKSLDGRG 60 VSGK D + MKYA+GASYT K G + ++KTAP+G M G++IGS++GK+ D + Sbjct 148 VSGKFDASAMKYAVGASYTGVAS--KAGEFTLSLKTAPSGDAMFGRMIGSVHGKTTDNKS 205 Query 61 AELAAEVEYSIPENKTNITFGGLWYMNDEKDTAIKSKISQHG 102 AELAAEV+ ++ + +TNI FGGLWY+ND+KDT +K+K++Q+ Sbjct 206 AELAAEVDCNLLDGRTNIQFGGLWYLNDKKDTFLKAKLTQNA 247 > pfa:PF14_0301 conserved protein, unknown function Length=289 Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 4/100 (4%) Query 1 VSGKLDCAGMKYALGASYTAPTPGLKGGSWVAAVKTAPAGGMMLGKIIGSLNGKSLDGRG 60 + G +D ++Y+ G +YT K ++ ++++ P+ G + +L ++ Sbjct 149 LEGNMDINNLQYSFGGAYTKHH---KDNLYIFSLRSIPSNKHFYGSLALNLFFQNKSIND 205 Query 61 AELAAEVEYSIPENKTNITFGGLWYMNDEKDTAIKSKISQ 100 ++ EV +I E K NI +WY+ D K+T +K+KIS Sbjct 206 NAISVEVIQNIMEKKANINVASIWYL-DNKNTFVKTKISN 244 > tpv:TP01_1012 hypothetical protein Length=469 Score = 30.4 bits (67), Expect = 1.4, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 11/91 (12%) Query 8 AGMKYALGASYTAPTPGLKGGSWVAAVKTAPAGGMMLGKIIGSLNGKSLDGRGAELAAEV 67 +G+ +G S + P L+G + VK P GG ++ +I S L G + Sbjct 160 SGVVVDVGGSCSNIAPVLEGYTLQDYVKEEPTGGNLMDRIFYSY----LSSTGITVRPSY 215 Query 68 EYSIP---ENKTNITFGGLWYMNDEKDTAIK 95 EYS P EN TN G+ D T +K Sbjct 216 EYSKPPKTENSTN----GVGNSTDADTTVVK 242 > eco:b2149 mglA, ECK2142, JW2136, mglP; fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components; K10542 methyl-galactoside transport system ATP-binding protein [EC:3.6.3.17] Length=506 Score = 30.0 bits (66), Expect = 1.8, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%) Query 25 LKGGSWVAAVKTAPAGGMMLGKIIGSLNGKSLDGR 59 L+ G W+A T P G+ + KII + G+SL+ R Sbjct 222 LRDGQWIA---TEPLAGLTMDKIIAMMVGRSLNQR 253 > xla:379653 vwa5a, MGC68953, loh11cr2a; von Willebrand factor A domain containing 5A Length=793 Score = 28.5 bits (62), Expect = 5.3, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 0/25 (0%) Query 21 PTPGLKGGSWVAAVKTAPAGGMMLG 45 PTPGL G+ +A + PA G M G Sbjct 607 PTPGLMYGAPMACTMSMPASGFMFG 631 Lambda K H 0.311 0.131 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2031832220 Database: egene_temp_file_orthology_annotation_similarity_blast_database_966 Posted date: Sep 16, 2011 8:45 PM Number of letters in database: 82,071,388 Number of sequences in database: 164,496 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40