bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_2344_orf1
Length=109
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_069200 crooked neck-like protein 1, putative ; K128... 183 2e-46
bbo:BBOV_III004750 17.m07426; tetratricopeptide repeat domain ... 110 1e-24
pfa:PFD0180c CGI-201 protein, short form; K12869 crooked neck 108 4e-24
tpv:TP02_0476 crooked neck protein; K12869 crooked neck 104 5e-23
dre:393920 crnkl1, MGC55327, zgc:55327; crooked neck pre-mRNA ... 98.2 6e-21
ath:AT5G41770 crooked neck protein, putative / cell cycle prot... 98.2 6e-21
mmu:66877 Crnkl1, 1200013P10Rik, 5730590A01Rik, C80326, crn; C... 94.4 8e-20
hsa:51340 CRNKL1, CLF, CRN, Clf1, HCRN, MSTP021, SYF3; crooked... 92.4 3e-19
ath:AT5G45990 crooked neck protein, putative / cell cycle prot... 91.3 6e-19
ath:AT3G51110 crooked neck protein, putative / cell cycle prot... 89.4 2e-18
cel:M03F8.3 hypothetical protein; K12869 crooked neck 82.4 3e-16
ath:AT3G13210 crooked neck protein, putative / cell cycle prot... 77.4 1e-14
sce:YLR117C CLF1, NTC77, SYF3; Clf1p; K12869 crooked neck 58.5 5e-09
tgo:TGME49_105240 XPA-binding protein, putative ; K12867 pre-m... 49.7 2e-06
ath:AT5G28740 transcription-coupled DNA repair protein-related... 48.5 6e-06
xla:100036801 xab2; XPA binding protein 2; K12867 pre-mRNA-spl... 39.7 0.002
cel:C50F2.3 hypothetical protein; K12867 pre-mRNA-splicing fac... 38.5 0.005
dre:387600 xab2, MGC198247, zgc:63498, zgc:63949; XPA binding ... 37.7 0.009
dre:794079 pdcd11, MGC162501, cb680, im:7148359, sb:cb680, wu:... 37.0 0.015
cpv:cgd7_3690 crooked neck protein HAT repeats ; K12869 crooke... 36.6 0.018
sce:YDR416W SYF1, NTC90; Member of the NineTeen Complex (NTC) ... 35.0 0.052
dre:323855 c20orf14, fc12b02, prpf6, wu:fa05f07, wu:fc12b02, z... 34.7 0.069
hsa:720 C4A, C4, C4A2, C4A3, C4A4, C4A6, C4S, CO4, CPAMD2, MGC... 33.1 0.20
hsa:721 C4B, C4B1, C4B12, C4B2, C4B3, C4B5, C4F, CH, CO4, CPAM... 33.1 0.21
hsa:100507685 complement C4-B-like 33.1 0.22
sce:YML046W PRP39; Prp39p; K13217 pre-mRNA-processing factor 39 32.7
mmu:381510 Dpy19l4, Gm1023, Narg3; dpy-19-like 4 (C. elegans) 32.7 0.28
ath:AT1G08440 hypothetical protein 32.7 0.31
xla:779090 pdcd11, alg-4, alg4, nfbp, rrp5; programmed cell de... 32.3 0.40
hsa:22984 PDCD11, ALG-4, ALG4, KIAA0185, NFBP, RRP5; programme... 31.6 0.69
hsa:56949 XAB2, DKFZp762C1015, HCNP, HCRN, NTC90, SYF1; XPA bi... 31.2 0.86
mmu:328110 Prpf39, FLJ11128, MGC37077, Srcs1; PRP39 pre-mRNA p... 31.2 0.95
mmu:67439 Xab2, 0610041O14Rik, AV025587; XPA binding protein 2... 30.8 1.2
dre:567995 si:dkey-22l11.2 (EC:3.6.4.12); K10300 F-box protein... 30.4 1.6
hsa:79583 TMEM231, ALYE870, FLJ22167, PRO1886; transmembrane p... 30.0 1.7
mmu:18572 Pdcd11, 1110021I22Rik, ALG-4, Pdcd7, mKIAA0185; prog... 30.0 1.9
ath:AT1G44910 protein binding; K12821 pre-mRNA-processing fact... 29.6 2.2
eco:b1220 ychO, ECK1214, JW1211, ychP; predicted invasin 29.6 2.3
dre:503773 MGC158780, id:ibd5127, wu:fa56d01, zgc:158780; zgc:... 29.6 2.6
hsa:23090 ZNF423, Ebfaz, KIAA0760, MGC138520, MGC138522, OAZ, ... 29.3 3.4
bbo:BBOV_III009870 17.m07855; hypothetical protein 29.3 3.7
dre:100006560 hypothetical LOC100006560 28.9 3.8
ath:AT4G20920 double-stranded RNA binding 28.9 4.7
cpv:cgd5_920 Pre-mRNA splicing factor Pro1/Prp6. HAT repeat pr... 28.5 4.9
cel:Y48G8AL.6 smg-2; Suppressor with Morphological effect on G... 28.5 6.1
tpv:TP01_0797 hypothetical protein; K12855 pre-mRNA-processing... 28.1 6.8
sce:YML091C RPM2; Protein subunit of mitochondrial RNase P, ha... 28.1 8.2
> tgo:TGME49_069200 crooked neck-like protein 1, putative ; K12869
crooked neck
Length=794
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/109 (79%), Positives = 100/109 (91%), Gaps = 0/109 (0%)
Query 1 RELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFY 60
+EL+RARKVFERYLSNRPSQE+FLRFCKFEERH+ IPRARAGFEKAIELLPEDMLDE+F+
Sbjct 320 KELDRARKVFERYLSNRPSQESFLRFCKFEERHRQIPRARAGFEKAIELLPEDMLDEHFF 379
Query 61 LKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGDK 109
LKFA FEERQRE RAK IY+ AL+++P+G++D LY KYV FQKQFGDK
Sbjct 380 LKFAQFEERQRETERAKVIYQQALEQLPKGESDLLYEKYVTFQKQFGDK 428
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query 1 RELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFY 60
R+L++AR +F R ++ + F+ + + E R I R R + K IEL P + +
Sbjct 550 RDLDKARLIFGRAIAECGKPKIFVAYAQLELRLGCIDRCRKIYAKFIELHP---FNPRAW 606
Query 61 LKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFG 107
+ E EQARA+A+ E A+ + L+ Y+ + +G
Sbjct 607 IAMIDLEVLAEEQARARALCELAIGMEEMDTPELLWKAYIDMEVGWG 653
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query 3 LERARKVFERYLSNRPSQEAFLRFCKFEER-HKNIPRARAGFEKAIELLPEDMLDENFYL 61
++RAR ++ER L + F F FE R +++P AR E+ IE+ E+ DE
Sbjct 655 VDRARSLYERLLEKTQHVKVFKSFADFEWRIVESLPNARKVIERGIEVCKENSWDEERAS 714
Query 62 KFAAFEERQREQARAKAI 79
+ +RE A++I
Sbjct 715 LLEHWLSMERESGDAQSI 732
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query 2 ELERARKVFERYLSNRPSQ----------EAFLRFCKFEE-RHKNIPRARAGFEKAIELL 50
++++ R V+ER L+N P ++ + FEE + K++ R R + K +E++
Sbjct 469 DIDKIRNVYERALANVPPVLEKRFWKRYVYIWISYALFEELQAKDVERCRQVYVKMLEVI 528
Query 51 PEDMLD-ENFYLKFAAFEERQREQARAKAIYEAAL 84
P + +A+FE RQR+ +A+ I+ A+
Sbjct 529 PHKKFSFAKIWSLYASFEVRQRDLDKARLIFGRAI 563
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query 9 VFERYLS-NRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKFAAFE 67
VFER L+ + + +L++ + E ++K I R +++ LLP E F+ K+A E
Sbjct 129 VFERALNVDFQNTTLWLKYIEMESKNKFINSCRNLYDRVCLLLPR---QEQFWFKYAHME 185
Query 68 E 68
E
Sbjct 186 E 186
> bbo:BBOV_III004750 17.m07426; tetratricopeptide repeat domain
containing protein; K12869 crooked neck
Length=665
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 78/108 (72%), Gaps = 0/108 (0%)
Query 2 ELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYL 61
EL+R R++FER+L +RPS +FL+F KFE+R KN P ARA + K +E++P ++L E F+L
Sbjct 189 ELDRCRQIFERFLESRPSCASFLKFAKFEQRQKNYPLARAAYVKCLEIIPPELLTEEFFL 248
Query 62 KFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGDK 109
KFAAFE +Q + A+ +YE L +PR +++LY +V+FQKQ D+
Sbjct 249 KFAAFETQQGNLSGAEKVYEQGLGILPRESSEQLYRSFVSFQKQHRDR 296
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query 5 RARKVFERYLSNRPSQ-EAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKF 63
RAR VFER L P+ +LR+ + E ++KN+ AR F++ + LLP + F+ K+
Sbjct 91 RARSVFERALQVDPNNVNLWLRYIETEMKNKNVNAARNLFDRVVSLLPR---VDQFWFKY 147
Query 64 AAFEERQREQARAKAIYEAALQRVPRGQADELYSKY 99
A FEE A A+ ++E ++ P ++ LY K+
Sbjct 148 AHFEELLGNYAGARTVFERWMEWNPDDRSWMLYIKF 183
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query 7 RKVFERYLS-NRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKFAA 65
RK FE L R ++++ +E ++ RAR+ FE+A+++ P ++ N +L++
Sbjct 59 RKEFEDKLRRQRHHMGTWIKYALWEANQQDFRRARSVFERALQVDPNNV---NLWLRYIE 115
Query 66 FEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
E + + A+ +++ + +PR D+ + KY F++ G+
Sbjct 116 TEMKNKNVNAARNLFDRVVSLLPR--VDQFWFKYAHFEELLGN 156
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query 2 ELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYL 61
+L+ RK F L + F + + E + N+ R R K IE P +L
Sbjct 431 DLDSMRKTFGLGLGQCKKPKLFETYAQIELKLGNLDRCRHIHAKYIETWP---FKPESWL 487
Query 62 KFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQF 106
F E E+ R + + EAA+ + ++++Y+ ++++
Sbjct 488 SFIELELMLNERKRVRGLCEAAIAMDQMDMPETVWNRYIEIEREW 532
> pfa:PFD0180c CGI-201 protein, short form; K12869 crooked neck
Length=780
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 74/109 (67%), Gaps = 0/109 (0%)
Query 1 RELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFY 60
E+ + R++FER + + P E F +F KFE+++KNI RARA +EK IELLP +DENFY
Sbjct 186 NEINKCREIFERLIVSIPKLECFYKFIKFEKKYKNIVRARAAYEKCIELLPSCYIDENFY 245
Query 61 LKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGDK 109
+ F FEE Q E R K IY AL+ +P+ +++ LY ++ FQK++ +K
Sbjct 246 IHFCNFEEEQNEYERCKKIYIEALKILPKNKSELLYKNFLQFQKKYANK 294
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query 1 RELERARKVFERYLS-NRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENF 59
+++ER R +FER L+ + ++ +L++ + E +KNI AR E+ + LLP L+ F
Sbjct 85 KDIERCRSIFERALNIDYTNKNLWLKYIEVELINKNINSARNLLERVVLLLP---LENIF 141
Query 60 YLKFAAFEERQREQARAKAIYEAALQ 85
+ K+A EE A+ IYE ++
Sbjct 142 WKKYAHLEEILNNYVNARNIYERWIK 167
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Query 3 LERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLK 62
+ +AR +F L P+++ F +FC+FE + NI R + K +E P + ++
Sbjct 425 VNKARSIFNNALQTIPNEKIFEKFCEFELKLGNIRECRNVYAKYVEAFP---FNSKAWIS 481
Query 63 FAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQ 103
FE E RA+ I E A+ + ++ Y+ +
Sbjct 482 MINFELSLDEVERARQIAEIAINLDDMKLPELIWKNYIDME 522
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 57/104 (54%), Gaps = 11/104 (10%)
Query 7 RKVFERYLSNRPSQEAFLRFCKFEERH-KNIPRARAGFEKAIELLPE-DMLDENFYLKFA 64
+K ++RY+ ++ + FEE + +NI RAR + I++L + + ++ +A
Sbjct 363 KKFWKRYIY------LWINYSIFEELYAQNIQRARDVYNNIIKILSSYEFTFKKIFILYA 416
Query 65 AFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
FE RQ +A++I+ ALQ +P ++++ K+ F+ + G+
Sbjct 417 TFELRQLNVNKARSIFNNALQTIPN---EKIFEKFCEFELKLGN 457
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query 1 RELERARKVFERYLSNRPSQE-----AFLRFCKFEERHKNIPRARAGFEKAIELLPEDML 55
+ ++RAR V+ + S E F+ + FE R N+ +AR+ F A++ +P
Sbjct 385 QNIQRARDVYNNIIKILSSYEFTFKKIFILYATFELRQLNVNKARSIFNNALQTIP---- 440
Query 56 DENFYLKFAAFEERQREQARAKAIYEAALQRVP 88
+E + KF FE + + +Y ++ P
Sbjct 441 NEKIFEKFCEFELKLGNIRECRNVYAKYVEAFP 473
> tpv:TP02_0476 crooked neck protein; K12869 crooked neck
Length=657
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 75/107 (70%), Gaps = 0/107 (0%)
Query 2 ELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYL 61
E++R R +F RY+ NRPS +FL+ KFEE++K RAR+ F K +E+L ++LDE+F++
Sbjct 189 EVDRCRSIFNRYIENRPSCMSFLKLVKFEEKYKKTSRARSAFVKCVEVLDPELLDEDFFI 248
Query 62 KFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
KFA FE+R A ++YE L+ + + ++++LY +++FQKQF +
Sbjct 249 KFANFEQRHNNIEGANSVYEQGLKLLDKSKSEKLYDSFISFQKQFKN 295
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query 1 RELERARKVFERYLSNRPSQEA-FLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENF 59
+E RAR +FER L P+ + +LR+ + E ++KNI AR F++ + LLP +D+ F
Sbjct 87 QEFRRARSIFERALLVDPNNPSLWLRYIETEMKNKNINSARNLFDRVVCLLPR--IDQ-F 143
Query 60 YLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKY 99
+ K+A FEE A A++IYE ++ P +A LY K+
Sbjct 144 WFKYAHFEELLGNYAGARSIYERWMEWNPEDKAWMLYIKF 183
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/87 (20%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query 22 AFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKFAAFEERQREQARAKAIYE 81
++++ +E + RAR+ FE+A+ + P + + +L++ E + + A+ +++
Sbjct 75 TWIKYAVWEANQQEFRRARSIFERALLVDPN---NPSLWLRYIETEMKNKNINSARNLFD 131
Query 82 AALQRVPRGQADELYSKYVAFQKQFGD 108
+ +PR D+ + KY F++ G+
Sbjct 132 RVVCLLPR--IDQFWFKYAHFEELLGN 156
> dre:393920 crnkl1, MGC55327, zgc:55327; crooked neck pre-mRNA
splicing factor-like 1 (Drosophila); K12869 crooked neck
Length=753
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 73/109 (66%), Gaps = 0/109 (0%)
Query 1 RELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFY 60
+E+++AR ++E ++ P + ++++ FEE+H + R R FE+A+E E+ + EN Y
Sbjct 195 KEVDKARSIYENFVMVHPEVKNWIKYAHFEEKHGYVARGRKVFERAVEFFGEEQVSENLY 254
Query 61 LKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGDK 109
+ FA FEE+Q+E R + IY+ AL R+P+ QA EL+ Y F+K+FGD+
Sbjct 255 VAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKNYTVFEKRFGDR 303
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Query 5 RARKVFERYL-SNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKF 63
+ RK FE + NR ++++ ++EE + + R+R+ +E+A+++ D + +LK+
Sbjct 64 KKRKGFEDNIRKNRTVISNWIKYAQWEESLQEVQRSRSIYERALDV---DHRNITLWLKY 120
Query 64 AAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
A E + R+ A+ I++ A+ +PR ++ + KY ++ G+
Sbjct 121 AEMEMKNRQVNHARNIWDRAITILPR--VNQFWYKYTYMEEMLGN 163
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query 1 RELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFY 60
+ L+ AR+ + P + F + + E + + R R +EK +E PE+ +
Sbjct 425 KNLQNARRGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFSPENC---TTW 481
Query 61 LKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQ 103
+KFA E + R++AI+E A+ + + L+ Y+ F+
Sbjct 482 IKFAELETILGDTDRSRAIFELAIGQPRLDMPEVLWKSYIDFE 524
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 11/110 (10%)
Query 4 ERARKVFERYLSNRPSQE-----AFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDEN 58
ER R+V++ L P ++ +L + +FE R KN+ AR G AI P++ L
Sbjct 390 ERTRQVYKACLELIPHKKFTFAKIWLLYGQFEIRQKNLQNARRGLGTAIGKCPKNKL--- 446
Query 59 FYLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
+ + E + RE R + +YE L+ P + K+ + GD
Sbjct 447 -FKGYIELELQLREFDRCRKLYEKYLEFSPENCT--TWIKFAELETILGD 493
> ath:AT5G41770 crooked neck protein, putative / cell cycle protein,
putative; K12869 crooked neck
Length=705
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 75/108 (69%), Gaps = 0/108 (0%)
Query 2 ELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYL 61
E+ERAR ++ER++ P A++R+ KFE + + R R+ +E+A E L +D E ++
Sbjct 208 EIERARTIYERFVLCHPKVSAYIRYAKFEMKGGEVARCRSVYERATEKLADDEEAEILFV 267
Query 62 KFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGDK 109
FA FEER +E RA+ IY+ AL +P+G+A++LY K+VAF+KQ+GDK
Sbjct 268 AFAEFEERCKEVERARFIYKFALDHIPKGRAEDLYRKFVAFEKQYGDK 315
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 61/105 (58%), Gaps = 6/105 (5%)
Query 5 RARKVFERYLSN-RPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKF 63
R RK FE + R + + ++++ ++EE K+ RAR+ +E+AIE D + +LK+
Sbjct 76 RRRKEFEDQIRRARWNIQVWVKYAQWEESQKDYARARSVWERAIE---GDYRNHTLWLKY 132
Query 64 AAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
A FE + + A+ +++ A+ +PR D+L+ KY+ ++ G+
Sbjct 133 AEFEMKNKFVNSARNVWDRAVTLLPR--VDQLWYKYIHMEEILGN 175
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query 3 LERARKVFERYLSNRP-SQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYL 61
+ AR V++R ++ P + + ++ EE NI AR FE+ ++ P D+ +L
Sbjct 142 VNSARNVWDRAVTLLPRVDQLWYKYIHMEEILGNIAGARQIFERWMDWSP----DQQGWL 197
Query 62 KFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
F FE R E RA+ IYE + P+ A Y +Y F+ + G+
Sbjct 198 SFIKFELRYNEIERARTIYERFVLCHPKVSA---YIRYAKFEMKGGE 241
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query 3 LERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLK 62
L AR++ + P + F ++ + E + N+ R R +E+ +E PE+ + K
Sbjct 439 LTGARQILGNAIGKAPKDKIFKKYIEIELQLGNMDRCRKLYERYLEWSPENCYA---WSK 495
Query 63 FAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
+A E E RA+AI+E A+ + + L+ Y+ F+ G+
Sbjct 496 YAELERSLVETERARAIFELAISQPALDMPELLWKAYIDFEISEGE 541
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 54/145 (37%), Gaps = 47/145 (32%)
Query 2 ELERARKVFERYLSNRPSQE----AFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDE 57
E+ R R V+ER E F+ F +FEER K + RAR ++ A++ +P+ E
Sbjct 241 EVARCRSVYERATEKLADDEEAEILFVAFAEFEERCKEVERARFIYKFALDHIPKGRA-E 299
Query 58 NFYLKFAAFE------------------------------------------ERQREQAR 75
+ Y KF AFE E + R
Sbjct 300 DLYRKFVAFEKQYGDKEGIEDAIVGKRRFQYEDEVRKSPSNYDSWFDYVRLEESVGNKDR 359
Query 76 AKAIYEAALQRVPRGQADELYSKYV 100
+ IYE A+ VP + + +Y+
Sbjct 360 IREIYERAIANVPPAEEKRYWQRYI 384
> mmu:66877 Crnkl1, 1200013P10Rik, 5730590A01Rik, C80326, crn;
Crn, crooked neck-like 1 (Drosophila); K12869 crooked neck
Length=690
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 74/109 (67%), Gaps = 0/109 (0%)
Query 1 RELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFY 60
+E+ERAR ++ER++ P+ + ++++ +FEE+H AR +E+A+E ++ +DE+ Y
Sbjct 196 KEVERARTIYERFVLVHPAVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLY 255
Query 61 LKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGDK 109
+ FA FEE Q+E R + IY+ AL R+ + +A EL+ Y F+K+FGD+
Sbjct 256 VAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDR 304
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Query 5 RARKVFERYL-SNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKF 63
R RK FE + NR ++++ ++EE K I RAR+ +E+A+++ D + +LK+
Sbjct 65 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDV---DYRNITLWLKY 121
Query 64 AAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
A E + R+ A+ I++ A+ +PR ++ + KY ++ G+
Sbjct 122 AEMEMKNRQVNHARNIWDRAITTLPR--VNQFWYKYTYMEEMLGN 164
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query 1 RELERARKVFERYLS-NRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENF 59
+E++RAR ++ER L + + +L++ + E +++ + AR +++AI LP F
Sbjct 95 KEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPR---VNQF 151
Query 60 YLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQF 106
+ K+ EE A A+ ++E ++ P QA + Y+ F+ ++
Sbjct 152 WYKYTYMEEMLGNVAGARQVFERWMEWQPEEQA---WHSYINFELRY 195
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query 1 RELERARKVFERYLSNRPSQEAFL-RFCKFEERHKNIPRARAGFEKAIELLPEDMLDENF 59
R++ AR +++R ++ P F ++ EE N+ AR FE+ +E PE E
Sbjct 129 RQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPE----EQA 184
Query 60 YLKFAAFEERQREQARAKAIYE 81
+ + FE R +E RA+ IYE
Sbjct 185 WHSYINFELRYKEVERARTIYE 206
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query 6 ARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKFAA 65
AR+ + P + F + + E + + R R +EK +E PE+ ++KFA
Sbjct 431 ARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTS---WIKFAE 487
Query 66 FEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQ 103
E + RA+AIYE A+ + + L+ Y+ F+
Sbjct 488 LETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFE 525
> hsa:51340 CRNKL1, CLF, CRN, Clf1, HCRN, MSTP021, SYF3; crooked
neck pre-mRNA splicing factor-like 1 (Drosophila); K12869
crooked neck
Length=848
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 72/109 (66%), Gaps = 0/109 (0%)
Query 1 RELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFY 60
+E++RAR ++ER++ P + ++++ +FEE+H AR +E+A+E ++ +DE+ Y
Sbjct 357 KEVDRARTIYERFVLVHPDVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLY 416
Query 61 LKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGDK 109
+ FA FEE Q+E R + IY+ AL R+ + A EL+ Y F+K+FGD+
Sbjct 417 VAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDR 465
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Query 5 RARKVFERYL-SNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKF 63
R RK FE + NR ++++ ++EE K I RAR+ +E+A+++ D + +LK+
Sbjct 226 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDV---DYRNITLWLKY 282
Query 64 AAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
A E + R+ A+ I++ A+ +PR ++ + KY ++ G+
Sbjct 283 AEMEMKNRQVNHARNIWDRAITTLPR--VNQFWYKYTYMEEMLGN 325
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query 1 RELERARKVFERYLS-NRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENF 59
+E++RAR ++ER L + + +L++ + E +++ + AR +++AI LP F
Sbjct 256 KEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPR---VNQF 312
Query 60 YLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQF 106
+ K+ EE A A+ ++E ++ P QA + Y+ F+ ++
Sbjct 313 WYKYTYMEEMLGNVAGARQVFERWMEWQPEEQA---WHSYINFELRY 356
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query 1 RELERARKVFERYLSNRPSQEAFL-RFCKFEERHKNIPRARAGFEKAIELLPEDMLDENF 59
R++ AR +++R ++ P F ++ EE N+ AR FE+ +E PE E
Sbjct 290 RQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPE----EQA 345
Query 60 YLKFAAFEERQREQARAKAIYE 81
+ + FE R +E RA+ IYE
Sbjct 346 WHSYINFELRYKEVDRARTIYE 367
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query 1 RELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFY 60
+ L AR+ + P + F + + E + + R R +EK +E PE+ +
Sbjct 587 KNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENCTS---W 643
Query 61 LKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQ 103
+KFA E + RA+AIYE A+ + + L+ Y+ F+
Sbjct 644 IKFAELETILGDIDRARAIYELAISQPRLDMPEVLWKSYIDFE 686
> ath:AT5G45990 crooked neck protein, putative / cell cycle protein,
putative
Length=673
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 74/109 (67%), Gaps = 1/109 (0%)
Query 2 ELERARKVFERYLSNRPSQEAFLRFCKFE-ERHKNIPRARAGFEKAIELLPEDMLDENFY 60
E+ERAR ++ER++ P AF+R+ KFE +R + AR +E+A++ L D E +
Sbjct 194 EIERARSIYERFVLCHPKVSAFIRYAKFEMKRGGQVKLAREVYERAVDKLANDEEAEILF 253
Query 61 LKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGDK 109
+ FA FEER +E RA+ IY+ AL + +G+A+ELY K+VAF+KQ+GDK
Sbjct 254 VSFAEFEERCKEVERARFIYKFALDHIRKGRAEELYKKFVAFEKQYGDK 302
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 61/105 (58%), Gaps = 6/105 (5%)
Query 5 RARKVFERYLSN-RPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKF 63
R RK FE + R + + ++++ K+EE + RAR+ +E+A+E + + ++K+
Sbjct 62 RRRKEFEDQIRRARWNIQVWVKYAKWEESQMDYARARSVWERALE---GEYRNHTLWVKY 118
Query 64 AAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
A FE + + A+ +++ ++ +PR D+L+ KY+ +++ G+
Sbjct 119 AEFEMKNKFVNNARNVWDRSVTLLPR--VDQLWEKYIYMEEKLGN 161
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query 3 LERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLK 62
L AR++ + P + F ++ + E + NI R R +E+ +E PE+ +
Sbjct 426 LTGARQILGNAIGKAPKVKIFKKYIEMELKLVNIDRCRKLYERFLEWSPENCYA---WRN 482
Query 63 FAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
+A FE E RA+AI+E A+ + + L+ Y+ F+ G+
Sbjct 483 YAEFEISLAETERARAIFELAISQPALDMPELLWKTYIDFEISEGE 528
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 55/112 (49%), Gaps = 16/112 (14%)
Query 1 RELERARKVFE---RYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAI---------E 48
+E+ERAR +++ ++ ++E + +F FE+++ + + G E AI +
Sbjct 264 KEVERARFIYKFALDHIRKGRAEELYKKFVAFEKQYGD----KEGIEDAIVGKKRFEYED 319
Query 49 LLPEDMLDENFYLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYV 100
+ ++ L+ + + + EE + R + IYE A+ VP Q + +Y+
Sbjct 320 EVSKNPLNYDSWFDYVRLEESVGNKDRIREIYERAIANVPPAQEKRFWQRYI 371
> ath:AT3G51110 crooked neck protein, putative / cell cycle protein,
putative
Length=413
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
Query 2 ELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPE-DMLDENFY 60
E+ER+R ++ER++ P +F+R+ KFE ++ + AR +E+AIE+L + + E +
Sbjct 188 EIERSRSIYERFVLCHPKASSFIRYAKFEMKNSQVSLARIVYERAIEMLKDVEEEAEMIF 247
Query 61 LKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGDK 109
+ FA FEE +E RA+ +Y+ AL +P+G+A++LY K+VAF+KQ+G+K
Sbjct 248 VAFAEFEELCKEVERARFLYKYALDHIPKGRAEDLYKKFVAFEKQYGNK 296
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query 5 RARKVFERYLSN-RPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKF 63
R RK FE + + + + ++R+ +EE K+ RAR+ +E+A+E E + +LK+
Sbjct 55 RRRKEFEDQIRGAKTNSQVWVRYADWEESQKDHDRARSVWERALE--DESYRNHTLWLKY 112
Query 64 AAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
A FE R + A+ +++ A++ +PR D+ + KY+ ++ G+
Sbjct 113 AEFEMRNKSVNHARNVWDRAVKILPR--VDQFWYKYIHMEEILGN 155
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query 4 ERARKVFERYLSNRP--SQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYL 61
+RAR V+ER L + + +L++ +FE R+K++ AR +++A+++LP + F+
Sbjct 88 DRARSVWERALEDESYRNHTLWLKYAEFEMRNKSVNHARNVWDRAVKILPR---VDQFWY 144
Query 62 KFAAFEERQREQARAKAIYEAALQRVPRGQA 92
K+ EE A+ I+E + P QA
Sbjct 145 KYIHMEEILGNIDGARKIFERWMDWSPDQQA 175
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 56/111 (50%), Gaps = 14/111 (12%)
Query 1 RELERARKVFERYLSNRP---SQEAFLRFCKFEERHKN--------IPRARAGFEKAIEL 49
+E+ERAR +++ L + P +++ + +F FE+++ N + R + +E +
Sbjct 258 KEVERARFLYKYALDHIPKGRAEDLYKKFVAFEKQYGNKEGIDDAIVGRRKLQYEGEVRK 317
Query 50 LPEDMLDENFYLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYV 100
P L+ + + + + EE ++ R + +YE A+ VP + + +Y+
Sbjct 318 NP---LNYDSWFDYISLEETLGDKDRIREVYERAIANVPLAEEKRYWQRYI 365
> cel:M03F8.3 hypothetical protein; K12869 crooked neck
Length=747
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Query 1 RELERARKVFERYLS-NRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENF 59
+E++RAR V++R+L + + + ++++ KFEER+ I ARA +EKA+E E+ ++E
Sbjct 201 KEIDRARSVYQRFLHVHGINVQNWIKYAKFEERNGYIGNARAAYEKAMEYFGEEDINETV 260
Query 60 YLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGDK 109
+ FA FEERQ+E RA+ I++ L +P + +E++ Y +K+FG++
Sbjct 261 LVAFALFEERQKEHERARGIFKYGLDNLPSNRTEEIFKHYTQHEKKFGER 310
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query 2 ELERARKVFERYLS-NRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFY 60
E++RAR VFER L + S +L++ + E R K I AR F++AI ++P M F+
Sbjct 101 EIQRARSVFERALDVDHRSISIWLQYAEMEMRCKQINHARNVFDRAITIMPRAM---QFW 157
Query 61 LKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQF 106
LK++ EE A+ I+E ++ P QA + Y+ F+ ++
Sbjct 158 LKYSYMEEVIENIPGARQIFERWIEWEPPEQA---WQTYINFELRY 200
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Query 1 RELERARKVFERYLSNRP-SQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENF 59
+++ AR VF+R ++ P + + +L++ EE +NIP AR FE+ IE P E
Sbjct 134 KQINHARNVFDRAITIMPRAMQFWLKYSYMEEVIENIPGARQIFERWIEWEP----PEQA 189
Query 60 YLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFG 107
+ + FE R +E RA+++Y+ L G + + KY F+++ G
Sbjct 190 WQTYINFELRYKEIDRARSVYQRFLH--VHGINVQNWIKYAKFEERNG 235
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query 1 RELERARKVFERYLSNRP-SQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENF 59
RE +R RK++E++L + P S + +++F + E + R+RA F A++ DM E
Sbjct 469 REFDRCRKLYEKFLESSPESSQTWIKFAELETLLGDTDRSRAVFTIAVQQPALDM-PELL 527
Query 60 YLKFAAFEERQREQARAKAIYEAALQRV 87
+ + FE E +A+ +YE LQR
Sbjct 528 WKAYIDFEIACEEHEKARDLYETLLQRT 555
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query 5 RARKVFERYL-SNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKF 63
+ RK FE + NR ++++ K+EE I RAR+ FE+A+++ D + +L++
Sbjct 70 KKRKEFEDGIRKNRMQLANWIKYGKWEESIGEIQRARSVFERALDV---DHRSISIWLQY 126
Query 64 AAFEERQREQARAKAIYEAALQRVPRGQADELYSKY 99
A E R ++ A+ +++ A+ +PR A + + KY
Sbjct 127 AEMEMRCKQINHARNVFDRAITIMPR--AMQFWLKY 160
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query 2 ELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYL 61
+L ARK+ + P + F + E + + R R +EK +E PE ++
Sbjct 437 DLNAARKIMGVAIGKCPKDKLFRAYIDLELQLREFDRCRKLYEKFLESSPE---SSQTWI 493
Query 62 KFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQ 103
KFA E + R++A++ A+Q+ + L+ Y+ F+
Sbjct 494 KFAELETLLGDTDRSRAVFTIAVQQPALDMPELLWKAYIDFE 535
> ath:AT3G13210 crooked neck protein, putative / cell cycle protein,
putative
Length=657
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 10/108 (9%)
Query 2 ELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYL 61
E+E AR ++ER++ P A++R+ KFE +H + A FE+A + L +D E ++
Sbjct 173 EIECARSIYERFVLCHPKVSAYIRYAKFEMKHGQVELAMKVFERAKKELADDEEAEILFV 232
Query 62 KFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGDK 109
FA FEE+ Y+ AL ++P+G+A+ LYSK+VAF+KQ GDK
Sbjct 233 AFAEFEEQ----------YKFALDQIPKGRAENLYSKFVAFEKQNGDK 270
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query 1 RELERARKVFERYLSNRPSQ-EAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENF 59
R ++R RK++ERYL P A+ ++ +FE R RA FE AI DM E
Sbjct 427 RNIDRCRKLYERYLEWSPGNCYAWRKYAEFEMSLAETERTRAIFELAISQPALDM-PELL 485
Query 60 YLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVA 101
+ + FE + E R +A+YE L R + ++K+ A
Sbjct 486 WKTYIDFEISEGELERTRALYERLLDRTKHCKVWVDFAKFEA 527
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query 3 LERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLK 62
L AR++ + P + F ++ + E + +NI R R +E+ +E P + + K
Sbjct 396 LTGARQILGNAIGKAPKDKIFKKYIEIELQLRNIDRCRKLYERYLEWSPGNCYA---WRK 452
Query 63 FAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
+A FE E R +AI+E A+ + + L+ Y+ F+ G+
Sbjct 453 YAEFEMSLAETERTRAIFELAISQPALDMPELLWKTYIDFEISEGE 498
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query 1 RELERARKVFERYLSNRP-SQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENF 59
+ + AR V++R +S P + + +F EE+ NI AR E+ I P D+
Sbjct 105 KSVNEARNVWDRAVSLLPRVDQLWYKFIHMEEKLGNIAGARQILERWIHCSP----DQQA 160
Query 60 YLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFG 107
+L F FE + E A++IYE + P+ A Y +Y F+ + G
Sbjct 161 WLCFIKFELKYNEIECARSIYERFVLCHPKVSA---YIRYAKFEMKHG 205
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query 55 LDENFYLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
L+ ++K+A FE + + A+ +++ A+ +PR D+L+ K++ +++ G+
Sbjct 89 LNTQVWVKYADFEMKNKSVNEARNVWDRAVSLLPR--VDQLWYKFIHMEEKLGN 140
> sce:YLR117C CLF1, NTC77, SYF3; Clf1p; K12869 crooked neck
Length=687
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query 6 ARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIEL--------LPEDMLDE 57
R+++ +Y+ P + +L++ +FE RH N R+ + AI+ + DM
Sbjct 185 VREIYSKYVMAHPQMQTWLKWVRFENRHGNTEFTRSVYSLAIDTVANLQNLQIWSDMEVA 244
Query 58 NFYLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
FA +E Q+E R+ A+Y+ A+++ P Q L + + F+KQFGD
Sbjct 245 KLVNSFAHWEAAQQEYERSSALYQIAIEKWPSNQL--LKAGLLDFEKQFGD 293
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query 2 ELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYL 61
++ +ARK+ + + P + F + + E + K R R +EK IE P D+ +
Sbjct 419 DVPKARKILGKAIGLCPKAKTFKGYIELEVKLKEFDRVRKIYEKFIEFQPSDL---QIWS 475
Query 62 KFAAFEERQREQARAKAIYEAALQRVPRGQADE----LYSKYVAFQKQ 105
++ EE + R + IY AL E L KY+ F+ +
Sbjct 476 QYGELEENLGDWDRVRGIYTIALDENSDFLTKEAKIVLLQKYITFETE 523
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query 5 RARKVFERYLS-NRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENF---Y 60
R R +E YL NR ++R+ +FE ++ RAR+ FE+A+ ++D +F +
Sbjct 49 RKRTEYEGYLKRNRLDMGQWIRYAQFEIEQHDMRRARSIFERAL------LVDSSFIPLW 102
Query 61 LKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
+++ E + + A+ + A+ +PR D+L+ KY+ ++ +
Sbjct 103 IRYIDAELKVKCINHARNLMNRAISTLPR--VDKLWYKYLIVEESLNN 148
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query 23 FLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKFAAFEERQREQARAKAIYEA 82
+L + KF RH ++P+AR KAI L P+ + + E + +E R + IYE
Sbjct 407 WLMYAKFLIRHDDVPKARKILGKAIGLCPK----AKTFKGYIELEVKLKEFDRVRKIYEK 462
Query 83 ALQRVPRGQADELYSKYVAFQKQFGD 108
++ P +++S+Y ++ GD
Sbjct 463 FIEFQPSDL--QIWSQYGELEENLGD 486
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 20/92 (21%)
Query 1 RELERARKVFERYLSNRPSQ-EAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDEN- 58
+E +R RK++E+++ +PS + + ++ + EE + R R + A LDEN
Sbjct 451 KEFDRVRKIYEKFIEFQPSDLQIWSQYGELEENLGDWDRVRGIYTIA--------LDENS 502
Query 59 ----------FYLKFAAFEERQREQARAKAIY 80
K+ FE +E +A+ +Y
Sbjct 503 DFLTKEAKIVLLQKYITFETESQEFEKARKLY 534
> tgo:TGME49_105240 XPA-binding protein, putative ; K12867 pre-mRNA-splicing
factor SYF1
Length=966
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query 3 LERARKVFERYLSNRPSQEA---FLRFCKFEERHKNIPRARAGFEKAIELLP-EDMLDEN 58
LERAR++F++ ++ P+Q A FL + K EE A ++ A + +P E+ LD
Sbjct 617 LERARELFQQATASVPAQHAKRFFLLYAKLEEEFGLAKHALTIYQAATKAVPQEEKLD-- 674
Query 59 FYLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
YL + A AR + IYE A++ +P QA ++ +Y A +K G+
Sbjct 675 MYLIYIARTTELLGVARTRQIYEEAIENLPEKQARDMCLRYAAVEKGLGE 724
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 54/127 (42%), Gaps = 27/127 (21%)
Query 8 KVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGF-----EKAIELLPEDMLDEN---- 58
KV+ YL+++ + RF +E + +P + + E+ L D L+++
Sbjct 59 KVWVGYLNSKKDAPPYTRFLLYERALRGLPGSYKLWFAYLKERVASLSSHDPLEDSRPFE 118
Query 59 ------------------FYLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYV 100
++ F F +RQ+ R + ++ ALQ + Q D+++ +Y+
Sbjct 119 EANVVFERALVHLSRMPKIWMLFVDFLKRQKLLTRTRRAFDRALQSLAVTQHDQVWDRYI 178
Query 101 AFQKQFG 107
F K+ G
Sbjct 179 QFVKEAG 185
> ath:AT5G28740 transcription-coupled DNA repair protein-related;
K12867 pre-mRNA-splicing factor SYF1
Length=917
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query 4 ERARKVFERYLSNRPSQEAFLRFCKFEERH--KNIPRARAGFEKAIELLPEDMLDENFYL 61
ER K+F +Y + +L KF +R+ + RAR FE A+ + P D + YL
Sbjct 573 ERGVKIF-KYPHVKDIWVTYL--TKFVKRYGKTKLERARELFEHAVSMAPSDAV-RTLYL 628
Query 62 KFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVA 101
++A EE RA +YE A ++VP GQ E+Y Y++
Sbjct 629 QYAKLEEDYGLAKRAMKVYEEATKKVPEGQKLEMYEIYIS 668
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 41/146 (28%)
Query 3 LERARKVFERYLSNRPSQEA---FLRFCKFEERHK------------------------- 34
LERAR++FE +S PS +L++ K EE +
Sbjct 604 LERARELFEHAVSMAPSDAVRTLYLQYAKLEEDYGLAKRAMKVYEEATKKVPEGQKLEMY 663
Query 35 -----------NIPRARAGFEKAIEL-LPEDMLDENFYLKFAAFEERQREQARAKAIYEA 82
+PR R +E+AIE LP + + +KFA E E RA+A+Y+
Sbjct 664 EIYISRAAEIFGVPRTREIYEQAIESGLPHKDV-KIMCIKFAELERSLGEIDRARALYKY 722
Query 83 ALQRVPRGQADELYSKYVAFQKQFGD 108
+ Q E ++K+ F+ Q G+
Sbjct 723 SSQFADPRSDPEFWNKWHEFEVQHGN 748
> xla:100036801 xab2; XPA binding protein 2; K12867 pre-mRNA-splicing
factor SYF1
Length=838
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query 1 RELERARKVFERYLSNRP---SQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDE 57
++LERAR +FE+ L P ++ FL + K EE H A A +E+A + + E
Sbjct 562 KKLERARDLFEQSLDGCPRKFAKNIFLLYAKLEEEHGLARHAMALYERATQAVETGEQYE 621
Query 58 --NFYLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
N Y+K AA + IYE A++ +P Q+ E+ ++ + + G+
Sbjct 622 MFNIYIKRAA---EIYGVTHTRTIYERAIELLPDEQSREMCLRFADMECKLGE 671
> cel:C50F2.3 hypothetical protein; K12867 pre-mRNA-splicing factor
SYF1
Length=855
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 40/122 (32%)
Query 1 RELERARKVFERYLSNRPSQEA---FLRFCKFEERHK----------------------- 34
++LERAR +FE+ L N P A FL + K EE H
Sbjct 575 KKLERARDLFEQCLENCPPTHAKYIFLLYAKLEEEHGLARHALSIYNRACSGVDRADMHS 634
Query 35 -------------NIPRARAGFEKAIELLPEDMLDENFYLKFAAFEERQREQARAKAIYE 81
I + R FE+AI LPED L++A E E RA+AIY
Sbjct 635 MYNIYIKKVQEMYGIAQCRPIFERAISELPEDK-SRAMSLRYAQLETTVGEIDRARAIYA 693
Query 82 AA 83
A
Sbjct 694 HA 695
> dre:387600 xab2, MGC198247, zgc:63498, zgc:63949; XPA binding
protein 2; K12867 pre-mRNA-splicing factor SYF1
Length=851
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 42/148 (28%)
Query 1 RELERARKVFERYLSNRPSQEA---FLRFCKF-----------------------EERHK 34
++LERAR +FE+ L P++ A +L + K EERH+
Sbjct 566 KKLERARDLFEQALDGCPAKYAKTIYLLYAKLEEEYGLARHAMAVYERATAAVEAEERHQ 625
Query 35 -------------NIPRARAGFEKAIELLPEDMLDENFYLKFAAFEERQREQARAKAIYE 81
+ RA ++KAIE+LP++ + L+FA E + E RA+AIY
Sbjct 626 MFNIYIKRAAEIYGVTHTRAIYQKAIEVLPDEHA-RDMCLRFADMESKLGEIDRARAIYS 684
Query 82 AALQRV-PRGQADELYSKYVAFQKQFGD 108
Q PR A + + F+ + G+
Sbjct 685 YCSQICDPRVTA-HFWQTWKEFEIRHGN 711
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Query 4 ERARKVFERYLSNR-PSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLK 62
+ + V++R + R + + + + F E H + +E+ I L + + +
Sbjct 496 QSTKAVYDRIIDLRIATPQIIINYAMFLEEHNYFEESFKAYERGIALFKWPNVHDIWNTY 555
Query 63 FAAFEER--QREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFG 107
F +R ++ RA+ ++E AL P A +Y Y ++++G
Sbjct 556 LTKFIDRYGGKKLERARDLFEQALDGCPAKYAKTIYLLYAKLEEEYG 602
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query 26 FCKFEERH--KNIPRARAGFEKAIELLPEDMLDENFYLKFAAFEERQREQARAKAIYEAA 83
KF +R+ K + RAR FE+A++ P + YL +A EE A A+YE A
Sbjct 556 LTKFIDRYGGKKLERARDLFEQALDGCPAKYA-KTIYLLYAKLEEEYGLARHAMAVYERA 614
Query 84 LQRVPRGQADELYSKYV 100
V + ++++ Y+
Sbjct 615 TAAVEAEERHQMFNIYI 631
> dre:794079 pdcd11, MGC162501, cb680, im:7148359, sb:cb680, wu:fc68c10;
programmed cell death 11; K14792 rRNA biogenesis
protein RRP5
Length=1816
Score = 37.0 bits (84), Expect = 0.015, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query 7 RKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKFAAF 66
+KVFER + + + + + I A + ++ ++ +D + YL + F
Sbjct 1623 QKVFERAIQYCEPLLVYQQLADIYAKSEKIKEAESLYKSMVKRFRQD---KAVYLSYGTF 1679
Query 67 EERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
RQR+ A A+ + ALQ + + +L +++ + QFG+
Sbjct 1680 LLRQRQSDAANALLQRALQSLSSKEHVDLIARFARLEFQFGN 1721
> cpv:cgd7_3690 crooked neck protein HAT repeats ; K12869 crooked
neck
Length=736
Score = 36.6 bits (83), Expect = 0.018, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query 2 ELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDEN 58
E++ AR V + + + P + F+ + KFE+RHKN+ + E+ I +L E ++D N
Sbjct 218 EIKSARGVMKDLIISYPDESNFIEYIKFEQRHKNLFSS----EQIINILSETLIDIN 270
Score = 33.1 bits (74), Expect = 0.24, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query 7 RKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKFAAF 66
R ++ +++ +P ++++ KFEE I AR + I P DE+ ++++ F
Sbjct 190 RHIYRKWIDWKPDPSIYIQYSKFEEECGEIKSARGVMKDLIISYP----DESNFIEYIKF 245
Query 67 EERQR 71
E+R +
Sbjct 246 EQRHK 250
Score = 30.0 bits (66), Expect = 2.1, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query 5 RARKVFERYLS-NRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKF 63
R RK FE + R +L + K+E NI +R+ FE+ I + E++ + ++
Sbjct 86 RKRKEFEDSIRRKRWKISLYLSYAKWESLQNNIKNSRSIFERGILVNYENV---RIWREY 142
Query 64 AAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQ 103
E A+ ++E +PR DE + KY+ +
Sbjct 143 IKLEITNGNINNARNLFERVTHLLPR--IDEFWIKYIQME 180
> sce:YDR416W SYF1, NTC90; Member of the NineTeen Complex (NTC)
that contains Prp19p and stabilizes U6 snRNA in catalytic
forms of the spliceosome containing U2, U5, and U6 snRNAs; null
mutant has splicing defect and arrests in G2/M; homologs
in human and C. elegans; K12867 pre-mRNA-splicing factor SYF1
Length=859
Score = 35.0 bits (79), Expect = 0.052, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query 40 RAGFEKAIELLPEDMLDENFYLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKY 99
R +++ I++LP E F +KF+ FE E RA+ I + +P + EL+ +
Sbjct 726 RELYQECIQILPNSKAVE-FVIKFSDFESSIGETIRAREILAYGAKLLPPSRNTELWDSF 784
Query 100 VAFQKQFGDK 109
F+ + GDK
Sbjct 785 EIFELKHGDK 794
> dre:323855 c20orf14, fc12b02, prpf6, wu:fa05f07, wu:fc12b02,
zgc:65913; c20orf14 homolog (H. sapiens); K12855 pre-mRNA-processing
factor 6
Length=944
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query 28 KFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKFAAFEERQREQARAKAIYEAALQRV 87
+ EE+ ++I RAR + + ++ P M + +L + EE+ + RA+AI E A R+
Sbjct 720 QIEEQSESIDRAREAYNQGLKKCPHSM---SLWLLLSRLEEKVGQLTRARAILEKA--RL 774
Query 88 PRGQADELYSKYVAFQKQFGDK 109
Q+ EL+ + V + + G K
Sbjct 775 KNPQSPELWLESVRLEYRAGLK 796
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query 3 LERARKVFERYLSNRP-SQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYL 61
++RAR+ + + L P S +L + EE+ + RARA EKA P+ +L
Sbjct 728 IDRAREAYNQGLKKCPHSMSLWLLLSRLEEKVGQLTRARAILEKARLKNPQ---SPELWL 784
Query 62 KFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYV 100
+ E R + A + ALQ P + L+S+ V
Sbjct 785 ESVRLEYRAGLKNIANTLMAKALQECP--NSGILWSEAV 821
> hsa:720 C4A, C4, C4A2, C4A3, C4A4, C4A6, C4S, CO4, CPAMD2, MGC164979,
RG; complement component 4A (Rodgers blood group);
K03989 complement component 4
Length=1744
Score = 33.1 bits (74), Expect = 0.20, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query 20 QEAFLRFCKFEE--RHKNIPRARAGFEKAIELL-PEDMLDEN 58
+E FL C+F E R K+ + +AG ++A+E+L ED++DE+
Sbjct 729 REPFLSCCQFAESLRKKSRDKGQAGLQRALEILQEEDLIDED 770
> hsa:721 C4B, C4B1, C4B12, C4B2, C4B3, C4B5, C4F, CH, CO4, CPAMD3,
FLJ60561, MGC164979; complement component 4B (Chido blood
group); K03989 complement component 4
Length=1744
Score = 33.1 bits (74), Expect = 0.21, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query 20 QEAFLRFCKFEE--RHKNIPRARAGFEKAIELL-PEDMLDEN 58
+E FL C+F E R K+ + +AG ++A+E+L ED++DE+
Sbjct 729 REPFLSCCQFAESLRKKSRDKGQAGLQRALEILQEEDLIDED 770
> hsa:100507685 complement C4-B-like
Length=1744
Score = 33.1 bits (74), Expect = 0.22, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query 20 QEAFLRFCKFEE--RHKNIPRARAGFEKAIELL-PEDMLDEN 58
+E FL C+F E R K+ + +AG ++A+E+L ED++DE+
Sbjct 729 REPFLSCCQFAESLRKKSRDKGQAGLQRALEILQEEDLIDED 770
> sce:YML046W PRP39; Prp39p; K13217 pre-mRNA-processing factor
39
Length=629
Score = 32.7 bits (73), Expect = 0.26, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query 40 RAGFEKAIELLPEDMLDENFYLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKY 99
R FE A +L+ + L F+ KF FE Q+ + IYE ++ VP Q ++ Y
Sbjct 144 RNNFEIAKDLIGKQFLSHPFWDKFIEFEVGQKNWHNVQRIYEYIIE-VPLHQYARFFTSY 202
Query 100 VAF 102
F
Sbjct 203 KKF 205
> mmu:381510 Dpy19l4, Gm1023, Narg3; dpy-19-like 4 (C. elegans)
Length=722
Score = 32.7 bits (73), Expect = 0.28, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 0/40 (0%)
Query 65 AFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQK 104
+ E RQR++ R EA +++ R A E KYV+FQ+
Sbjct 8 SVEPRQRKKQRTSGSQEAKAEKIRRTPAPERAPKYVSFQR 47
> ath:AT1G08440 hypothetical protein
Length=501
Score = 32.7 bits (73), Expect = 0.31, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query 1 RELERARKVFERY---LSNRPSQEAFLRFCKFEERH 33
+E+E+ R+ ERY L+++ ++EA F K+E RH
Sbjct 221 KEVEKRRRNLERYKSVLNSKSNEEALANFAKWEPRH 256
> xla:779090 pdcd11, alg-4, alg4, nfbp, rrp5; programmed cell
death 11; K14792 rRNA biogenesis protein RRP5
Length=1812
Score = 32.3 bits (72), Expect = 0.40, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query 17 RPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPE-DMLDENFYLKFAAFEERQREQAR 75
R + +++F F + ++A++ LPE D +D KFA E + + R
Sbjct 1663 RQEKSVWIKFATFLLKQGQGDGTHKLLQRALKSLPEKDHVD--VISKFAQLEFQLGDTER 1720
Query 76 AKAIYEAALQRVPRGQADELYSKYVAFQKQFGDK 109
AKA++E+ L P+ +L+S Y+ + G +
Sbjct 1721 AKALFESTLSSYPK--RTDLWSVYIDMMVKHGSQ 1752
Score = 29.3 bits (64), Expect = 3.4, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query 4 ERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKF 63
E K FER + + F + + + +A + ++ ++ ++ ++KF
Sbjct 1616 ESLTKAFERAVQYNEPLKVFQQLADIYIKSEKFKQAEDLYNTMLKRFRQE---KSVWIKF 1672
Query 64 AAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
A F +Q + + + AL+ +P ++ SK+ + Q GD
Sbjct 1673 ATFLLKQGQGDGTHKLLQRALKSLPEKDHVDVISKFAQLEFQLGD 1717
> hsa:22984 PDCD11, ALG-4, ALG4, KIAA0185, NFBP, RRP5; programmed
cell death 11; K14792 rRNA biogenesis protein RRP5
Length=1871
Score = 31.6 bits (70), Expect = 0.69, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query 2 ELERARKVFERYLSN-RPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFY 60
+ + A +++ R L R + ++++ F R + ++A+E LP +
Sbjct 1706 KFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRSQAAASHRVLQRALECLPSKE-HVDVI 1764
Query 61 LKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGDK 109
KFA E + + RAKAI+E L P+ +++S Y+ + G +
Sbjct 1765 AKFAQLEFQLGDAERAKAIFENTLSTYPK--RTDVWSVYIDMTIKHGSQ 1811
> hsa:56949 XAB2, DKFZp762C1015, HCNP, HCRN, NTC90, SYF1; XPA
binding protein 2; K12867 pre-mRNA-splicing factor SYF1
Length=855
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query 1 RELERARKVFERYLSNRPSQEA---FLRFCKFEERHKNIPRARAGFEKAIELL-PEDMLD 56
R+LERAR +FE+ L P + A +L + + EE A A +E+A + P D
Sbjct 571 RKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYD 630
Query 57 E-NFYLKFAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQFGD 108
N Y+K AA + IY+ A++ + A E+ ++ + + G+
Sbjct 631 MFNIYIKRAA---EIYGVTHTRGIYQKAIEVLSDEHAREMCLRFADMECKLGE 680
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query 26 FCKFEERH--KNIPRARAGFEKAIELLPEDMLDENFYLKFAAFEERQREQARAKAIYEAA 83
KF R+ + + RAR FE+A++ P + YL +A EE A A+YE A
Sbjct 561 LTKFIARYGGRKLERARDLFEQALDGCPPKYA-KTLYLLYAQLEEEWGLARHAMAVYERA 619
Query 84 LQRVPRGQADELYSKYV 100
+ V Q ++++ Y+
Sbjct 620 TRAVEPAQQYDMFNIYI 636
> mmu:328110 Prpf39, FLJ11128, MGC37077, Srcs1; PRP39 pre-mRNA
processing factor 39 homolog (yeast); K13217 pre-mRNA-processing
factor 39
Length=665
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/116 (18%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query 1 RELERARKVFERYLSNRPSQEAFLR-FCKFEERHKNIPRARAGFEKAIELLPEDMLDENF 59
L ARK F+++ + P + + + E+RH NI ++ + + ++ +P L +
Sbjct 107 NHLMAARKAFDKFFVHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIP---LSVDL 163
Query 60 YLKFAAFEER------QREQARAKAIYE-AALQRVPRGQADELYSKYVAFQKQFGD 108
++ + F + Q + +E A L ++D+L+ Y+ ++ + G+
Sbjct 164 WIHYINFLKETLDPGDQETNTTIRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGN 219
> mmu:67439 Xab2, 0610041O14Rik, AV025587; XPA binding protein
2; K12867 pre-mRNA-splicing factor SYF1
Length=855
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 57/147 (38%), Gaps = 40/147 (27%)
Query 1 RELERARKVFERYLSNRPSQEA---FLRFCKFEE-----RHK------------------ 34
R+LERAR +FE+ L P + A +L + + EE RH
Sbjct 571 RKLERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYDRATRAVEPAQQYD 630
Query 35 -------------NIPRARAGFEKAIELLPEDMLDENFYLKFAAFEERQREQARAKAIYE 81
+ R ++KAIE+L ++ E L+FA E + E RA+AIY
Sbjct 631 MFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHARE-MCLRFADMECKLGEIDRARAIYS 689
Query 82 AALQRVPRGQADELYSKYVAFQKQFGD 108
Q + + F+ + G+
Sbjct 690 FCSQICDPRTTGAFWQTWKDFEVRHGN 716
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query 26 FCKFEERH--KNIPRARAGFEKAIELLPEDMLDENFYLKFAAFEERQREQARAKAIYEAA 83
KF R+ + + RAR FE+A++ P + YL +A EE A A+Y+ A
Sbjct 561 LTKFISRYGGRKLERARDLFEQALDGCPPKYA-KTLYLLYAQLEEEWGLARHAMAVYDRA 619
Query 84 LQRVPRGQADELYSKYV 100
+ V Q ++++ Y+
Sbjct 620 TRAVEPAQQYDMFNIYI 636
> dre:567995 si:dkey-22l11.2 (EC:3.6.4.12); K10300 F-box protein,
helicase, 18 [EC:3.6.4.12]
Length=992
Score = 30.4 bits (67), Expect = 1.6, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 0/55 (0%)
Query 34 KNIPRARAGFEKAIELLPEDMLDENFYLKFAAFEERQREQARAKAIYEAALQRVP 88
K IP+ E +E + EDM D++F ++ + ++ Q E A K E +++ +P
Sbjct 106 KCIPQEENVEEDFMEGITEDMFDDDFEMEIVSVKKEQAEVAVNKGDEEDSVEALP 160
> hsa:79583 TMEM231, ALYE870, FLJ22167, PRO1886; transmembrane
protein 231
Length=345
Score = 30.0 bits (66), Expect = 1.7, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query 37 PRARAGFEKAIELLPEDMLDENFYLKFAAFEERQREQARAKAIYEAALQRVPRGQADELY 96
PRAR+ LP + + F+LK +++EE+ + + + + A L P +
Sbjct 55 PRARSARAGLPNRLPTALFNSGFWLKRSSYEEQPTVRFQHQVLLVALLG--PESDGFLAW 112
Query 97 SKYVAFQKQFGDK 109
S + AF + GD+
Sbjct 113 STFPAFNRLQGDR 125
> mmu:18572 Pdcd11, 1110021I22Rik, ALG-4, Pdcd7, mKIAA0185; programmed
cell death 11; K14792 rRNA biogenesis protein RRP5
Length=1862
Score = 30.0 bits (66), Expect = 1.9, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query 2 ELERARKVFERYLSNRPSQ-EAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFY 60
++ERA+ +FE LS P + + + + +H + R FE+ I L + F+
Sbjct 1767 DVERAKAIFENTLSTYPKRTDVWSVYIDMTIKHGSQTAVRDIFERVIHLSLAPKRMKFFF 1826
Query 61 LKFAAFEERQREQARAKAIYEAALQRV 87
++ +E++ + +A+ AL+ V
Sbjct 1827 KRYLDYEKQHGTEKDVQAVKAKALEYV 1853
Score = 28.1 bits (61), Expect = 7.7, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 10/78 (12%)
Query 38 RARAG-----FEKAIELLP-EDMLDENFYLKFAAFEERQREQARAKAIYEAALQRVPRGQ 91
R++AG ++A+E LP ++ +D +KFA E + + RAKAI+E L P+
Sbjct 1729 RSQAGASHRVLQRALECLPAKEHVD--VIVKFAQLEFQLGDVERAKAIFENTLSTYPK-- 1784
Query 92 ADELYSKYVAFQKQFGDK 109
+++S Y+ + G +
Sbjct 1785 RTDVWSVYIDMTIKHGSQ 1802
> ath:AT1G44910 protein binding; K12821 pre-mRNA-processing factor
40
Length=926
Score = 29.6 bits (65), Expect = 2.2, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 15/114 (13%)
Query 1 RELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFY 60
R L ++ F YL R EA EER + +AR F K +E E +
Sbjct 443 RTLGERKQAFNEYLGQRKKVEA-------EERRRRQKKAREEFVKMLEECEELSSSLKWS 495
Query 61 LKFAAFEERQREQARAKAI--------YEAALQRVPRGQADELYSKYVAFQKQF 106
+ FE QR +A + Y L+R R +A E + +Y+A ++F
Sbjct 496 KAMSLFENDQRFKAVDRPRDREDLFDNYIVELERKEREKAAEEHRQYMADYRKF 549
> eco:b1220 ychO, ECK1214, JW1211, ychP; predicted invasin
Length=464
Score = 29.6 bits (65), Expect = 2.3, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query 34 KNIPRARAGFEKAIELLPEDMLDENFYLKFAAFEER--QREQARAKAIYEAALQRVPRGQ 91
+N+ RA G E E L L NFY FAA+ E+ +EQ A+ A R+P Q
Sbjct 185 ENLQRAGFGAEAWGEYL---RLSANFYQPFAAWHEQTATQEQRMARGYDLTARMRMPFYQ 241
Query 92 ADELYSKYVAFQKQFGDK 109
+ V+ ++ FGD+
Sbjct 242 H---LNTSVSLEQYFGDR 256
> dre:503773 MGC158780, id:ibd5127, wu:fa56d01, zgc:158780; zgc:113159
Length=598
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 0/44 (0%)
Query 63 FAAFEERQREQARAKAIYEAALQRVPRGQADELYSKYVAFQKQF 106
EE R + KA YEA L R+ GQA + S ++ Q+Q
Sbjct 111 LTPIEEASRLNQKLKANYEARLARLTPGQATQKTSLTLSLQRQM 154
> hsa:23090 ZNF423, Ebfaz, KIAA0760, MGC138520, MGC138522, OAZ,
Roaz, ZFP423, Zfp104; zinc finger protein 423
Length=1284
Score = 29.3 bits (64), Expect = 3.4, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 11/92 (11%)
Query 13 YLSNRPSQEAFLRFCK-FEERHKNIPRARAGFEKAIELLPEDMLDENFYLKFAAFEERQR 71
Y +N P + L+ K +E HKNIP A + KA E P E + +RQR
Sbjct 567 YCTNSPIFGSILKLTKHIKENHKNIPLAHSKKSKA-EQSPVSSDVE------VSSPKRQR 619
Query 72 EQARAKAIYEAALQRVPRGQADELYSKYVAFQ 103
A A +I P Q D +S + +FQ
Sbjct 620 LSASANSISNG---EYPCNQCDLKFSNFESFQ 648
> bbo:BBOV_III009870 17.m07855; hypothetical protein
Length=950
Score = 29.3 bits (64), Expect = 3.7, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query 9 VFERYLSNRPSQEAFLRFCKFEERH----KNIPRARAGFEKAIELLPEDMLD 56
++E + N PS E ++ + +FE R NI R R FE+ ++ + LD
Sbjct 91 MYECAVDNEPSAELWIAYTRFERRRASADANIGRIRTLFERGLKSVGLHALD 142
> dre:100006560 hypothetical LOC100006560
Length=1025
Score = 28.9 bits (63), Expect = 3.8, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query 14 LSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLKFAAFE-ERQRE 72
+SN+P+ E +R C+ + R + R + IE L ++ ++ ++ E E+ E
Sbjct 426 VSNKPTAEELIRHCRHQTRGAQVTR------QLIEQLLKEFIEATDFMGNKLMEREKMEE 479
Query 73 QARAKAIYEAALQRVPRGQADELYSK 98
RA+ + + +Q P Q LY K
Sbjct 480 IWRAQQCHLSCIQDPPGIQ---LYKK 502
> ath:AT4G20920 double-stranded RNA binding
Length=743
Score = 28.9 bits (63), Expect = 4.7, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query 10 FERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELL-----PEDMLDENFYLKFA 64
+ R+L+N P+++ F+ +R +++ AGFE + LL E ++ +F F
Sbjct 606 YARFLTNAPAEDLFVTAATGTQRDRSLLSDVAGFEYCVRLLGVKGPTEKRIEADF---FK 662
Query 65 AFEERQREQARAKAIYEAA 83
+QR + K I E++
Sbjct 663 PSLSKQRLEYVVKHIKESS 681
> cpv:cgd5_920 Pre-mRNA splicing factor Pro1/Prp6. HAT repeat
protein ; K12855 pre-mRNA-processing factor 6
Length=923
Score = 28.5 bits (62), Expect = 4.9, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 0/34 (0%)
Query 2 ELERARKVFERYLSNRPSQEAFLRFCKFEERHKN 35
E+ERA+ + ER +N PS + ++ K E KN
Sbjct 621 EIERAKIILERERTNSPSVQIWVESIKLENDQKN 654
> cel:Y48G8AL.6 smg-2; Suppressor with Morphological effect on
Genitalia family member (smg-2); K14326 regulator of nonsense
transcripts 1 [EC:3.6.4.-]
Length=1069
Score = 28.5 bits (62), Expect = 6.1, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query 3 LERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFYLK 62
++R + F Y SN PSQ + ++ + F K + + P M+D N Y
Sbjct 907 IKRMQYTFNEYKSNDPSQPRLPPTYSNSQNLLSMSKLAQTFNKNVPI-PAHMMDPNVYAA 965
Query 63 FAAFEERQR-EQARAKAIYEAAL 84
++R+R +Q R EAA+
Sbjct 966 ARNQKDRRRGDQRRPPPQAEAAM 988
> tpv:TP01_0797 hypothetical protein; K12855 pre-mRNA-processing
factor 6
Length=1032
Score = 28.1 bits (61), Expect = 6.8, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 0/50 (0%)
Query 2 ELERARKVFERYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLP 51
E +RARK+ E+ + + + +++ + E + KN +A +KA+E+ P
Sbjct 662 EYDRARKLLEKARTRCNTPKVWMKSVQLERQLKNYEKALELVDKALEIHP 711
> sce:YML091C RPM2; Protein subunit of mitochondrial RNase P,
has roles in nuclear transcription, cytoplasmic and mitochondrial
RNA processing, and mitochondrial translation; distributed
to mitochondria, cytoplasmic processing bodies, and the
nucleus (EC:3.1.26.5); K14533 ribonuclease P protein component,
mitochondrial [EC:3.1.26.5]
Length=1202
Score = 28.1 bits (61), Expect = 8.2, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query 12 RYLSNRPSQEAFLRFCKFEERHKNIPRARAGFEKAIELLPEDMLDENFY 60
+ + N S F+R C F E+ K+I +A + AIEL+ E + D Y
Sbjct 862 KLIENCESLSNFIRICDFPEKFKSIA-IQAENKNAIELIYERLFDGGKY 909
Lambda K H
0.322 0.136 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2072286120
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40