bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_2597_orf2
Length=109
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_010260 glycerol-3-phosphate dehydrogenase, putative... 78.6 4e-15
tgo:TGME49_107570 glycerol-3-phosphate dehydrogenase, putative... 76.6 2e-14
mmu:333433 Gpd1l, 2210409H23Rik, D9Ertd660e; glycerol-3-phosph... 75.1 5e-14
hsa:23171 GPD1L, GPD1-L, KIAA0089; glycerol-3-phosphate dehydr... 72.8 3e-13
dre:449663 gpd1l, wu:fi13g03, wu:fi45b08, zgc:92580; glycerol-... 72.4 3e-13
dre:550404 gpd1a, zgc:112197; glycerol-3-phosphate dehydrogena... 72.0 4e-13
xla:379962 gpd1l, MGC130781, MGC52863; glycerol-3-phosphate de... 71.2 7e-13
dre:406615 gpd1, wu:fc30a07, zgc:63859; glycerol-3-phosphate d... 70.9 1e-12
dre:386799 fd11e11; wu:fd11e11 69.7 2e-12
pfa:PFL0780w glycerol-3-phosphate dehydrogenase, putative (EC:... 69.3 3e-12
dre:325181 gpd1b, Gpd1, gpd1h, gpd1l, wu:fc58b05, zgc:66051, z... 67.0 1e-11
mmu:14555 Gpd1, AI747587, Gdc-1, Gdc1, KIAA4010, mKIAA4010; gl... 67.0 1e-11
xla:399227 gpd1; glycerol-3-phosphate dehydrogenase 1 (soluble... 65.1 6e-11
xla:444456 MGC83663 protein; K00006 glycerol-3-phosphate dehyd... 64.7 7e-11
sce:YOL059W GPD2, GPD3; Gpd2p (EC:1.1.1.8); K00006 glycerol-3-... 64.7 8e-11
hsa:2819 GPD1, FLJ26652; glycerol-3-phosphate dehydrogenase 1 ... 64.3 8e-11
tpv:TP01_0302 NAD-dependent glycerol-3-phosphate dehydrogenase... 62.8 3e-10
sce:YDL022W GPD1, DAR1, HOR1, OSG1, OSR5; Gpd1p; K00006 glycer... 62.0 4e-10
cel:K11H3.1 gpdh-2; Glycerol-3-Phosphate DeHydrogenase family ... 60.1 2e-09
ath:AT5G40610 glycerol-3-phosphate dehydrogenase (NAD+) / GPDH... 59.7 2e-09
cpv:cgd2_210 glycerol-3-phosphate dehydrogenase (EC:1.1.1.8); ... 52.0 5e-07
bbo:BBOV_IV004480 23.m06005; glycerol-3-phosphate dehydrogenas... 51.6 6e-07
pfa:PF11_0157 glycerol-3-phosphate dehydrogenase, putative; K0... 50.8 1e-06
cel:F47G4.3 gpdh-1; Glycerol-3-Phosphate DeHydrogenase family ... 38.1 0.007
dre:100331871 glycerol-3-phosphate dehydrogenase 1a-like 31.6 0.59
ath:AT5G54260 MRE11; MRE11 (meiotic recombination 11); endonuc... 30.4 1.4
cel:Y55F3C.2 srt-23; Serpentine Receptor, class T family membe... 29.6 2.7
eco:b4122 fumB, ECK4115, JW4083; anaerobic class I fumarate hy... 29.3 3.0
pfa:PFL0935c VAR; erythrocyte membrane protein 1, PfEMP1; K138... 28.9 4.4
hsa:339665 SLC35E4, MGC129826; solute carrier family 35, membe... 27.7 9.8
> tgo:TGME49_010260 glycerol-3-phosphate dehydrogenase, putative
(EC:1.1.1.8)
Length=515
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 44/52 (84%), Gaps = 0/52 (0%)
Query 1 LKVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
LKVS+VGSGNWG+ + KIVA NA+ S++F+ +VRMWVYEE V+G KLTD IN
Sbjct 17 LKVSVVGSGNWGSVIAKIVALNAQKSYVFHNEVRMWVYEEMVDGEKLTDIIN 68
> tgo:TGME49_107570 glycerol-3-phosphate dehydrogenase, putative
(EC:1.1.1.8); K00006 glycerol-3-phosphate dehydrogenase (NAD+)
[EC:1.1.1.8]
Length=401
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 44/52 (84%), Gaps = 0/52 (0%)
Query 1 LKVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
L+V+++GSGNWG+ +GKI A NA+ S++F+ VRMWV+EE +EG+KLTD IN
Sbjct 23 LRVAVIGSGNWGSVIGKICAQNAERSYVFHDQVRMWVFEEMIEGQKLTDIIN 74
> mmu:333433 Gpd1l, 2210409H23Rik, D9Ertd660e; glycerol-3-phosphate
dehydrogenase 1-like (EC:1.1.1.8); K00006 glycerol-3-phosphate
dehydrogenase (NAD+) [EC:1.1.1.8]
Length=351
Score = 75.1 bits (183), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/52 (63%), Positives = 40/52 (76%), Gaps = 0/52 (0%)
Query 1 LKVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
LKV +VGSGNWG+AV KI+ SN K F++ V+MWV+EE V GRKLTD IN
Sbjct 6 LKVCIVGSGNWGSAVAKIIGSNVKTLQKFSSTVKMWVFEETVNGRKLTDIIN 57
> hsa:23171 GPD1L, GPD1-L, KIAA0089; glycerol-3-phosphate dehydrogenase
1-like (EC:1.1.1.8); K00006 glycerol-3-phosphate dehydrogenase
(NAD+) [EC:1.1.1.8]
Length=351
Score = 72.8 bits (177), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/52 (61%), Positives = 39/52 (75%), Gaps = 0/52 (0%)
Query 1 LKVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
LKV +VGSGNWG+AV KI+ +N K F + V+MWV+EE V GRKLTD IN
Sbjct 6 LKVCIVGSGNWGSAVAKIIGNNVKKLQKFASTVKMWVFEETVNGRKLTDIIN 57
> dre:449663 gpd1l, wu:fi13g03, wu:fi45b08, zgc:92580; glycerol-3-phosphate
dehydrogenase 1-like (EC:1.1.1.8); K00006 glycerol-3-phosphate
dehydrogenase (NAD+) [EC:1.1.1.8]
Length=351
Score = 72.4 bits (176), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 9/80 (11%)
Query 1 LKVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWINIH------ 54
LKV +VGSGNWG+A+ +I+ SNA+ F T V+MWVYEE V G+KL++ IN
Sbjct 5 LKVCIVGSGNWGSAIARIIGSNAQKLQCFATTVKMWVYEEMVNGKKLSEIINTEHENVKY 64
Query 55 -PSWQ--SGVVPTPTASDSA 71
P ++ VV P D+A
Sbjct 65 LPGYKLPENVVAVPQLRDAA 84
> dre:550404 gpd1a, zgc:112197; glycerol-3-phosphate dehydrogenase
1a; K00006 glycerol-3-phosphate dehydrogenase (NAD+) [EC:1.1.1.8]
Length=351
Score = 72.0 bits (175), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 41/51 (80%), Gaps = 0/51 (0%)
Query 2 KVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
+V +VGSGNWG+A+ KIV +NA+N+ F++ V MWV+EE V GRKLT+ IN
Sbjct 6 RVCIVGSGNWGSAIAKIVGANARNNSKFDSTVNMWVFEEMVNGRKLTEIIN 56
> xla:379962 gpd1l, MGC130781, MGC52863; glycerol-3-phosphate
dehydrogenase 1-like (EC:1.1.1.8); K00006 glycerol-3-phosphate
dehydrogenase (NAD+) [EC:1.1.1.8]
Length=352
Score = 71.2 bits (173), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 0/52 (0%)
Query 1 LKVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
LKV +VGSGNWG+AV KI+ N KN F + V MWV+EE + GRKLT+ IN
Sbjct 7 LKVCIVGSGNWGSAVAKIIGHNVKNMKKFASTVNMWVFEENINGRKLTEIIN 58
> dre:406615 gpd1, wu:fc30a07, zgc:63859; glycerol-3-phosphate
dehydrogenase 1 (soluble) (EC:1.1.1.8); K00006 glycerol-3-phosphate
dehydrogenase (NAD+) [EC:1.1.1.8]
Length=349
Score = 70.9 bits (172), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 40/51 (78%), Gaps = 0/51 (0%)
Query 2 KVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
KV ++GSGNWG+A+ KIV N K+S+ F V+MWVYEE ++GRKLT+ IN
Sbjct 5 KVCIIGSGNWGSAIAKIVGHNVKSSNRFEPLVKMWVYEEMIDGRKLTEIIN 55
> dre:386799 fd11e11; wu:fd11e11
Length=321
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%), Gaps = 0/51 (0%)
Query 2 KVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
+V +VGSGNWG+A+ KIV +NA+N+ F++ V MWV+EE V GRKLT+ IN
Sbjct 6 RVCIVGSGNWGSAIAKIVGANARNNSKFDSTVNMWVFEEMVNGRKLTEIIN 56
> pfa:PFL0780w glycerol-3-phosphate dehydrogenase, putative (EC:1.1.1.8);
K00006 glycerol-3-phosphate dehydrogenase (NAD+)
[EC:1.1.1.8]
Length=367
Score = 69.3 bits (168), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 41/52 (78%), Gaps = 0/52 (0%)
Query 1 LKVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
LK+S++GSGNW +A+ K+V +NAKN+++F +VRMW+ +E V G ++ D IN
Sbjct 14 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIIN 65
> dre:325181 gpd1b, Gpd1, gpd1h, gpd1l, wu:fc58b05, zgc:66051,
zgc:85742; glycerol-3-phosphate dehydrogenase 1b; K00006 glycerol-3-phosphate
dehydrogenase (NAD+) [EC:1.1.1.8]
Length=350
Score = 67.0 bits (162), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 37/51 (72%), Gaps = 0/51 (0%)
Query 2 KVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
K+ ++GSGNWG+A+ KIV +NA + F V MWV+EE + GRKLT+ IN
Sbjct 5 KICIIGSGNWGSAIAKIVGANAAKYNTFENTVNMWVFEEMINGRKLTEIIN 55
> mmu:14555 Gpd1, AI747587, Gdc-1, Gdc1, KIAA4010, mKIAA4010;
glycerol-3-phosphate dehydrogenase 1 (soluble) (EC:1.1.1.8);
K00006 glycerol-3-phosphate dehydrogenase (NAD+) [EC:1.1.1.8]
Length=349
Score = 67.0 bits (162), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 38/51 (74%), Gaps = 0/51 (0%)
Query 2 KVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
KV +VGSGNWG+A+ KIV SNA F+ V MWV+EE++ GRKLT+ IN
Sbjct 5 KVCIVGSGNWGSAIAKIVGSNAGRLAHFDPRVTMWVFEEDIGGRKLTEIIN 55
> xla:399227 gpd1; glycerol-3-phosphate dehydrogenase 1 (soluble)
(EC:1.1.1.8); K00006 glycerol-3-phosphate dehydrogenase
(NAD+) [EC:1.1.1.8]
Length=348
Score = 65.1 bits (157), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 0/52 (0%)
Query 1 LKVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
LKV +VGSGNWG+A+ KIV NA F+ V+MWV+EE + G+KLT+ IN
Sbjct 3 LKVCIVGSGNWGSAIAKIVGDNAARLPQFDNIVKMWVFEELIGGKKLTEIIN 54
> xla:444456 MGC83663 protein; K00006 glycerol-3-phosphate dehydrogenase
(NAD+) [EC:1.1.1.8]
Length=349
Score = 64.7 bits (156), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 38/52 (73%), Gaps = 0/52 (0%)
Query 1 LKVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
L+V ++GSGNWG+A+ K++ +N + S F V MWV+EE + GRKLT+ IN
Sbjct 4 LRVCIIGSGNWGSAIAKVIGNNIQKSTSFQPTVNMWVFEELIGGRKLTEIIN 55
> sce:YOL059W GPD2, GPD3; Gpd2p (EC:1.1.1.8); K00006 glycerol-3-phosphate
dehydrogenase (NAD+) [EC:1.1.1.8]
Length=440
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query 1 LKVSLVGSGNWGTAVGKIVASNAK-NSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
KV+++GSGNWGT + K++A N + +SHIF +VRMWV++E++ LTD IN
Sbjct 84 FKVTVIGSGNWGTTIAKVIAENTELHSHIFEPEVRMWVFDEKIGDENLTDIIN 136
> hsa:2819 GPD1, FLJ26652; glycerol-3-phosphate dehydrogenase
1 (soluble) (EC:1.1.1.8); K00006 glycerol-3-phosphate dehydrogenase
(NAD+) [EC:1.1.1.8]
Length=349
Score = 64.3 bits (155), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 0/51 (0%)
Query 2 KVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
KV +VGSGNWG+A+ KIV NA F+ V MWV+EE++ G+KLT+ IN
Sbjct 5 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIIN 55
> tpv:TP01_0302 NAD-dependent glycerol-3-phosphate dehydrogenase;
K00006 glycerol-3-phosphate dehydrogenase (NAD+) [EC:1.1.1.8]
Length=354
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 0/51 (0%)
Query 2 KVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
KV++VG GNWGTA K+++ N ++FN VRMWV EE VEG KL++ IN
Sbjct 5 KVTVVGCGNWGTAAAKVISENTPKFNLFNPTVRMWVLEELVEGVKLSELIN 55
> sce:YDL022W GPD1, DAR1, HOR1, OSG1, OSR5; Gpd1p; K00006 glycerol-3-phosphate
dehydrogenase (NAD+) [EC:1.1.1.8]
Length=391
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query 1 LKVSLVGSGNWGTAVGKIVASNAKN-SHIFNTDVRMWVYEEEVEGRKLTDWIN 52
KV+++GSGNWGT + K+VA N K +F V+MWV+EEE+ G KLT+ IN
Sbjct 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIIN 87
> cel:K11H3.1 gpdh-2; Glycerol-3-Phosphate DeHydrogenase family
member (gpdh-2); K00006 glycerol-3-phosphate dehydrogenase
(NAD+) [EC:1.1.1.8]
Length=371
Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query 2 KVSLVGSGNWGTAVGKIVASNAKN-SHIFNTDVRMWVYEEEVEGRKLTDWIN 52
KV+++GSGNWG+A+ +IV S K+ F+ VRMWV+EE V G KL++ IN
Sbjct 25 KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVIN 76
> ath:AT5G40610 glycerol-3-phosphate dehydrogenase (NAD+) / GPDH;
K00006 glycerol-3-phosphate dehydrogenase (NAD+) [EC:1.1.1.8]
Length=400
Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query 2 KVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEV-EGRKLTDWIN 52
KV++VGSGNWG+ K++ASNA F+ +VRMWV+EE + G KL D IN
Sbjct 56 KVTVVGSGNWGSVAAKLIASNALKLPSFHDEVRMWVFEEVLPNGEKLNDVIN 107
> cpv:cgd2_210 glycerol-3-phosphate dehydrogenase (EC:1.1.1.8);
K00006 glycerol-3-phosphate dehydrogenase (NAD+) [EC:1.1.1.8]
Length=416
Score = 52.0 bits (123), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query 1 LKVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVE-GRKLTDWIN 52
LKV++ G+G++G+A+ +V N + + IFN++V++W+Y+E +E G L D IN
Sbjct 12 LKVTIFGAGSFGSAISCVVGYNTERTLIFNSEVKLWLYDERLESGEYLADVIN 64
> bbo:BBOV_IV004480 23.m06005; glycerol-3-phosphate dehydrogenase
(EC:1.1.1.8); K00006 glycerol-3-phosphate dehydrogenase
(NAD+) [EC:1.1.1.8]
Length=354
Score = 51.6 bits (122), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 0/51 (0%)
Query 2 KVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
KV +VG GNWG+AV K+VA N F+ V ++V EE EGR L++ IN
Sbjct 6 KVCVVGCGNWGSAVAKLVAENTPRYPEFDDTVIIYVLEEVFEGRNLSEIIN 56
> pfa:PF11_0157 glycerol-3-phosphate dehydrogenase, putative;
K00006 glycerol-3-phosphate dehydrogenase (NAD+) [EC:1.1.1.8]
Length=394
Score = 50.8 bits (120), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 0/52 (0%)
Query 1 LKVSLVGSGNWGTAVGKIVASNAKNSHIFNTDVRMWVYEEEVEGRKLTDWIN 52
LKVS++GSGNWGT V KI+ NA+ IF+ V+M+V EE VE KL+D IN
Sbjct 42 LKVSIIGSGNWGTVVSKIIGMNAQKLKIFHPIVKMYVKEEIVEEEKLSDIIN 93
> cel:F47G4.3 gpdh-1; Glycerol-3-Phosphate DeHydrogenase family
member (gpdh-1); K00006 glycerol-3-phosphate dehydrogenase
(NAD+) [EC:1.1.1.8]
Length=374
Score = 38.1 bits (87), Expect = 0.007, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query 2 KVSLVGSGNWGTAVGKIVASNAK-NSHIFNTDVRMWVYEEEVEGRKLTDWINIHPSWQSG 60
K+++VG GNWG+A+ +V K +F V +W + G ++ PS
Sbjct 23 KIAIVGGGNWGSAIACVVGKTVKAQDEVFQPIVSIWCRDSRKPG-------DLSPSIAET 75
Query 61 VVPTPTASDSAHLGPRWHLQGRRVWNAVL 89
+ +S H P++ L GRR+ + V+
Sbjct 76 I-------NSTHENPKY-LPGRRIPDNVV 96
> dre:100331871 glycerol-3-phosphate dehydrogenase 1a-like
Length=181
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 13/18 (72%), Positives = 15/18 (83%), Gaps = 0/18 (0%)
Query 35 MWVYEEEVEGRKLTDWIN 52
MWV+EE V GRKLT+ IN
Sbjct 1 MWVFEEMVNGRKLTEIIN 18
> ath:AT5G54260 MRE11; MRE11 (meiotic recombination 11); endonuclease/
exonuclease/ hydrolase/ manganese ion binding / protein
serine/threonine phosphatase; K10865 double-strand break
repair protein MRE11
Length=720
Score = 30.4 bits (67), Expect = 1.4, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 0/42 (0%)
Query 36 WVYEEEVEGRKLTDWINIHPSWQSGVVPTPTASDSAHLGPRW 77
W+ E EG ++DW NI Q+ V P + S H PR+
Sbjct 201 WMRPEVQEGCDVSDWFNILVLHQNRVKSNPKNAISEHFLPRF 242
> cel:Y55F3C.2 srt-23; Serpentine Receptor, class T family member
(srt-23)
Length=356
Score = 29.6 bits (65), Expect = 2.7, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 0/46 (0%)
Query 28 IFNTDVRMWVYEEEVEGRKLTDWINIHPSWQSGVVPTPTASDSAHL 73
IFN++ W + + G + TD+INI + + VV T + ++L
Sbjct 181 IFNSNYMSWFFNPMLPGHEATDYINIAHTINNCVVSLATTAIYSYL 226
> eco:b4122 fumB, ECK4115, JW4083; anaerobic class I fumarate
hydratase (fumarase B) (EC:4.2.1.2); K01676 fumarate hydratase,
class I [EC:4.2.1.2]
Length=548
Score = 29.3 bits (64), Expect = 3.0, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 0/32 (0%)
Query 44 GRKLTDWINIHPSWQSGVVPTPTASDSAHLGP 75
G++L +I HP + +G TP S LGP
Sbjct 407 GKELPQYIKDHPIYYAGPAKTPAGYPSGSLGP 438
> pfa:PFL0935c VAR; erythrocyte membrane protein 1, PfEMP1; K13850
erythrocyte membrane protein 1
Length=2256
Score = 28.9 bits (63), Expect = 4.4, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 12/73 (16%)
Query 22 NAKNS---HIFNTDVRMWVYEEEVEGRKLTDWINIHPSWQSGVVPTPTASDSAHLGPR-- 76
N K+S I N D + E++++G T + N SG PTP S P+
Sbjct 1121 NTKSSTYNDIINGDKEIQEREKDIKGAISTYFSN------SGTTPTPPVKPSV-TTPQTW 1173
Query 77 WHLQGRRVWNAVL 89
W L G +WN ++
Sbjct 1174 WELHGPHIWNGMI 1186
> hsa:339665 SLC35E4, MGC129826; solute carrier family 35, member
E4
Length=350
Score = 27.7 bits (60), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 12/40 (30%)
Query 58 QSGVVPTPTASDSAHLGPRWHLQGRRVWNAVLLFCLFFLL 97
++GV P PTA DS R+W +LL CL +L
Sbjct 240 EAGVAPPPTAGDS------------RLWACILLSCLLSVL 267
Lambda K H
0.321 0.134 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2072286120
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40