bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_2622_orf1
Length=108
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_069200 crooked neck-like protein 1, putative ; K128... 140 8e-34
dre:393920 crnkl1, MGC55327, zgc:55327; crooked neck pre-mRNA ... 63.2 2e-10
pfa:PFD0180c CGI-201 protein, short form; K12869 crooked neck 62.4 3e-10
bbo:BBOV_III004750 17.m07426; tetratricopeptide repeat domain ... 60.8 9e-10
hsa:51340 CRNKL1, CLF, CRN, Clf1, HCRN, MSTP021, SYF3; crooked... 60.8 9e-10
tpv:TP02_0476 crooked neck protein; K12869 crooked neck 58.5 5e-09
cel:M03F8.3 hypothetical protein; K12869 crooked neck 56.6 2e-08
mmu:66877 Crnkl1, 1200013P10Rik, 5730590A01Rik, C80326, crn; C... 56.2 2e-08
ath:AT5G45990 crooked neck protein, putative / cell cycle prot... 54.3 8e-08
ath:AT3G13210 crooked neck protein, putative / cell cycle prot... 48.5 5e-06
ath:AT5G41770 crooked neck protein, putative / cell cycle prot... 48.1 7e-06
cpv:cgd7_3690 crooked neck protein HAT repeats ; K12869 crooke... 47.4 1e-05
ath:AT3G17040 HCF107; HCF107 (HIGH CHLOROPHYLL FLUORESCENT 107... 33.1 0.21
cel:F12F6.6 sec-24.1; yeast SEC homolog family member (sec-24.... 31.6 0.62
ath:AT3G51110 crooked neck protein, putative / cell cycle prot... 31.2 0.78
mmu:245857 Ssh3, BC028922, SSH-3, mSSH-3L; slingshot homolog 3... 29.6 2.7
dre:564788 si:dkey-270k22.4 28.5 6.0
mmu:433719 Gm11487, OTTMUSG00000001246; predicted gene 11487 28.1
mmu:666730 Gm8261, EG666730; predicted gene 8261 28.1
> tgo:TGME49_069200 crooked neck-like protein 1, putative ; K12869
crooked neck
Length=794
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
Query 1 GALDRARALYERLLDKTQHVNAFKGYATFEWKKAEQKDRARQVLNRGLDVCKANGWDEDR 60
GA+DRAR+LYERLL+KTQHV FK +A FEW+ E AR+V+ RG++VCK N WDE+R
Sbjct 653 GAVDRARSLYERLLEKTQHVKVFKSFADFEWRIVESLPNARKVIERGIEVCKENSWDEER 712
Query 61 AALLEHWLALEREGGDAQAIQRVFRLLPKKIKKRKTQKN-ANGVEEVTE 108
A+LLEHWL++ERE GDAQ+I RVF +LPKK+KK + +++ +G E E
Sbjct 713 ASLLEHWLSMERESGDAQSIGRVFNMLPKKVKKIRVERDKESGAESTVE 761
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query 3 LDRARALYERLLDKTQHVNAFKGYATFEWKKAEQKDRARQVLNRGLDVCKANGWDEDRAA 62
LDRAR ++ER L +F + FE ++ Q RAR + +++ + DE
Sbjct 322 LDRARKVFERYLSNRPSQESFLRFCKFE-ERHRQIPRARAGFEKAIELLPEDMLDEHFFL 380
Query 63 LLEHWLALEREGGDAQAI-QRVFRLLPK 89
+ +RE A+ I Q+ LPK
Sbjct 381 KFAQFEERQRETERAKVIYQQALEQLPK 408
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 10/60 (16%)
Query 1 GALDRARALYERLLDKT----------QHVNAFKGYATFEWKKAEQKDRARQVLNRGLDV 50
G +D+ R +YER L ++V + YA FE +A+ +R RQV + L+V
Sbjct 468 GDIDKIRNVYERALANVPPVLEKRFWKRYVYIWISYALFEELQAKDVERCRQVYVKMLEV 527
> dre:393920 crnkl1, MGC55327, zgc:55327; crooked neck pre-mRNA
splicing factor-like 1 (Drosophila); K12869 crooked neck
Length=753
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query 4 DRARALYERLLDKTQHVNAFKGYATFEWK--KAEQKDRARQVL---NRGLDVCKANGWDE 58
D R LY+RLL +TQHV + YA FE ++ R RQV N+G+ C+ E
Sbjct 531 DNTRGLYKRLLQRTQHVKVWISYAQFELSIDTEDRVQRCRQVYEEANKGMQNCEEK---E 587
Query 59 DRAALLEHWLALEREGGDAQAIQRVFRLLPKKIKKRKTQKNANG 102
+R LLE W E E G +RV +LLP+K+KKR+ +G
Sbjct 588 ERLMLLESWRDYEEEFGSFTHKERVRKLLPEKVKKRRKITAEDG 631
> pfa:PFD0180c CGI-201 protein, short form; K12869 crooked neck
Length=780
Score = 62.4 bits (150), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 0/105 (0%)
Query 4 DRARALYERLLDKTQHVNAFKGYATFEWKKAEQKDRARQVLNRGLDVCKANGWDEDRAAL 63
D AR LY+RLL+ TQH +K YA F + + + R++L G++ CK N +R L
Sbjct 529 DNARKLYDRLLNITQHYKVYKSYAEFTYIYLDDIEMCRKILEEGIEFCKKNELINERCIL 588
Query 64 LEHWLALEREGGDAQAIQRVFRLLPKKIKKRKTQKNANGVEEVTE 108
L +E++ GD + I + + LPKK+KKRK KN + +E+ E
Sbjct 589 LNFLCDIEKDYGDKEIIDKTLKRLPKKVKKRKIIKNNDNDDEIIE 633
> bbo:BBOV_III004750 17.m07426; tetratricopeptide repeat domain
containing protein; K12869 crooked neck
Length=665
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query 6 ARALYERLLDKTQHVNAFKGYATFEWKKAEQKDRARQVLNRGLDVCKANGWDEDRAALLE 65
R +YERLL KT H+ F Y FE+ D AR + R L+ KA+ +RA +L
Sbjct 538 VRNIYERLLLKTTHIKVFLSYCEFEFTSGF-PDNARAIAERALEYYKASNHQVERAGMLA 596
Query 66 HWLALEREGGDAQAIQRVFRLLPKKIKKRKTQKNANGVEEVT 107
H L ER G+ + I + PKK+++++ + E++
Sbjct 597 HLLKFERTYGNDETISKTKDRQPKKVRRKRKMADGTVTEDIV 638
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query 1 GALDRARALYERLLDKTQHVNAFKGYATFEWKKAEQKDRARQVLNRGLDVCKANGWDEDR 60
G LDR R ++ER L+ +F +A FE ++ + AR + L++ E+
Sbjct 188 GELDRCRQIFERFLESRPSCASFLKFAKFE-QRQKNYPLARAAYVKCLEIIPPELLTEE- 245
Query 61 AALLEHWLALEREGGDAQAIQRVFR----LLPKK 90
+ A E + G+ ++V+ +LP++
Sbjct 246 --FFLKFAAFETQQGNLSGAEKVYEQGLGILPRE 277
> hsa:51340 CRNKL1, CLF, CRN, Clf1, HCRN, MSTP021, SYF3; crooked
neck pre-mRNA splicing factor-like 1 (Drosophila); K12869
crooked neck
Length=848
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Query 4 DRARALYERLLDKTQHVNAFKGYATFEWKKAEQKD--RARQVL---NRGLDVCKANGWDE 58
+R R LY RLL +TQHV + +A FE ++ + RQ+ N+ + C+ E
Sbjct 693 ERTRNLYRRLLQRTQHVKVWISFAQFELSSGKEGSLTKCRQIYEEANKTMRNCEEK---E 749
Query 59 DRAALLEHWLALEREGGDAQAIQRVFRLLPKKIKKRKTQKNANG 102
+R LLE W + E E G A +RV +L+P+K+KKR+ + +G
Sbjct 750 ERLMLLESWRSFEEEFGTASDKERVDKLMPEKVKKRRKVQTDDG 793
Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query 3 LDRARALYERLLDKTQHVNAFKGYATFEWKKAEQKDRARQVLNRGLDVCKANGWDE 58
+DRAR +YER + V + YA FE K A AR+V R ++ DE
Sbjct 359 VDRARTIYERFVLVHPDVKNWIKYARFEEKHA-YFAHARKVYERAVEFFGDEHMDE 413
> tpv:TP02_0476 crooked neck protein; K12869 crooked neck
Length=657
Score = 58.5 bits (140), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
Query 8 ALYERLLDKTQHVNAFKGYATFEWKKAEQKDRARQVLNRGLDVCKANGWDEDRAALLEHW 67
ALY++LL KTQH+ +K Y+ +E++ ++ R+V+ G+++ K + +R+ LL H
Sbjct 537 ALYKKLLQKTQHIKIYKEYSKYEYENGNNEN-GREVIEEGINLYKDS--SVERSKLLYHL 593
Query 68 LALEREGGDAQAIQRVFRLLPKKIKKRKTQKNANGVEEV 106
+ +E++ G+ Q +Q + LPKKI +++ +N V+++
Sbjct 594 VDMEKKYGNEQTVQNAKKRLPKKILRKRKLENDQEVDDI 632
> cel:M03F8.3 hypothetical protein; K12869 crooked neck
Length=747
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query 4 DRARALYERLLDKTQHVNAFKGYATFEWKKAEQKDRARQVLNRGLDVCKANGWDEDRAAL 63
++AR LYE LL +T H+ + A FE + + AR+ R + N E+R L
Sbjct 542 EKARDLYETLLQRTNHIKVWISMAEFE-QTIGNFEGARKAFERA-NQSLENAEKEERLML 599
Query 64 LEHWLALEREGGDAQAIQRVFRLLPKKIKKRKTQKNANGVE 104
LE W E + GD +A++RV ++P+++KKR+ + +GV+
Sbjct 600 LEAWKECETKSGDQEALKRVETMMPRRVKKRRQIQTEDGVD 640
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query 1 GALDRARALYERLLD-KTQHVNAFKGYATFEWKKAEQKDRARQVLNRGLDVC 51
G + RAR+++ER LD + ++ + YA E + +Q + AR V +R + +
Sbjct 100 GEIQRARSVFERALDVDHRSISIWLQYAEME-MRCKQINHARNVFDRAITIM 150
Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 49/133 (36%)
Query 3 LDRARALYERLLD-------------KTQHVNAFKG------------------------ 25
+DRAR++Y+R L K + N + G
Sbjct 203 IDRARSVYQRFLHVHGINVQNWIKYAKFEERNGYIGNARAAYEKAMEYFGEEDINETVLV 262
Query 26 -YATFEWKKAEQKDRARQVLNRGLDVCKANGWDEDRAALLEHWLALEREGGDAQAIQRVF 84
+A FE ++ E +RAR + GLD +N +E + +H+ E++ G+ I+ V
Sbjct 263 AFALFEERQKEH-ERARGIFKYGLDNLPSNRTEE----IFKHYTQHEKKFGERVGIEDVI 317
Query 85 RLLPKKIKKRKTQ 97
I KRKTQ
Sbjct 318 ------ISKRKTQ 324
> mmu:66877 Crnkl1, 1200013P10Rik, 5730590A01Rik, C80326, crn;
Crn, crooked neck-like 1 (Drosophila); K12869 crooked neck
Length=690
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query 4 DRARALYERLLDKTQHVNAFKGYATFEWKKAEQKD--RARQVL---NRGLDVCKANGWDE 58
+R R LY +LL +TQHV + +A FE ++ + RQ+ N+ + C+ E
Sbjct 532 ERTRNLYRQLLQRTQHVKVWISFAQFELSSGKEGSVAKCRQIYEEANKTMRNCEEK---E 588
Query 59 DRAALLEHWLALEREGGDAQAIQRVFRLLPKKIKKRKTQKNANG 102
+R LLE W + E E G +RV +L+P+K+KKR+ + +G
Sbjct 589 ERLMLLESWRSFEDEFGTVSDKERVDKLMPEKVKKRRKVQADDG 632
> ath:AT5G45990 crooked neck protein, putative / cell cycle protein,
putative
Length=673
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query 1 GALDRARALYERLLDKTQHVNAFKGYATFEWKKAEQKD----RARQVLNRGLDVCKANG- 55
G ++ RALYERLLD+T+H + +A FE +E K+ AR + +R K
Sbjct 527 GEFEKTRALYERLLDRTKHCKVWISFAKFEASASEHKEDGIKSARVIFDRANTYYKDTTP 586
Query 56 -WDEDRAALLEHWLALER---EGGDAQAIQ 81
+E+RA LLE WL +E E GD +Q
Sbjct 587 ELEEERATLLEDWLNMETGFGELGDVSVVQ 616
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query 3 LDRARALYERLLDKTQHVNAFKGYATFEWKKAEQKDRARQVLNRGLDVCKANGWDEDRAA 62
++RAR++YER + V+AF YA FE K+ Q AR+V R +D AN DE+
Sbjct 195 IERARSIYERFVLCHPKVSAFIRYAKFEMKRGGQVKLAREVYERAVDKL-AN--DEEAEI 251
Query 63 LLEHWLALEREGGDAQAIQRVFRLLPKKIKK 93
L + E + + + +++ I+K
Sbjct 252 LFVSFAEFEERCKEVERARFIYKFALDHIRK 282
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query 3 LDRARALYERLLD-KTQHVNAFKGYATFEWKKAEQKDRARQVLNRGLD 49
+DR R LYER L+ ++ A++ YA FE AE +RAR + +
Sbjct 459 IDRCRKLYERFLEWSPENCYAWRNYAEFEISLAET-ERARAIFELAIS 505
> ath:AT3G13210 crooked neck protein, putative / cell cycle protein,
putative
Length=657
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 21/102 (20%)
Query 1 GALDRARALYERLLDKTQHVNAFKGYATFE----------------WKKAEQKDRARQVL 44
G L+R RALYERLLD+T+H + +A FE +K + RAR++
Sbjct 497 GELERTRALYERLLDRTKHCKVWVDFAKFEASAAEHKEDEEEEDAIERKKDGIKRAREIF 556
Query 45 NRGLDVCKANGWD--EDRAALLEHWLALER---EGGDAQAIQ 81
+R K + + E+RA LLE WL +E + GD + +Q
Sbjct 557 DRANTYNKDSTPELKEERAMLLEDWLNMETGFGKLGDVRVVQ 598
> ath:AT5G41770 crooked neck protein, putative / cell cycle protein,
putative; K12869 crooked neck
Length=705
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 23/99 (23%)
Query 1 GALDRARALYERLLDKTQHVNAFKGYATFEWKKA------------------EQKD---R 39
G L+R RALYERLLD+T+H + +A FE A +KD R
Sbjct 540 GELERTRALYERLLDRTKHYKVWVSFAKFEASAAELEEDENEDEDQEEDVIEHKKDCIKR 599
Query 40 ARQVLNRGLDVCKANGWD--EDRAALLEHWLALEREGGD 76
AR + +R K + + E+RA LLE WL +E G+
Sbjct 600 ARAIFDRANTYYKDSTPELKEERATLLEDWLNMESSFGN 638
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query 3 LDRARALYERLLDKTQHVNAFKGYATFEWKKAEQKDRARQVLNRGLD 49
++RAR +YER + V+A+ YA FE K E R R V R +
Sbjct 209 IERARTIYERFVLCHPKVSAYIRYAKFEMKGGEVA-RCRSVYERATE 254
> cpv:cgd7_3690 crooked neck protein HAT repeats ; K12869 crooked
neck
Length=736
Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query 3 LDRARALYERLLDKTQHVNAFKGYATFEWKKAEQKDRARQVLNRGLDVCKANGWDEDRAA 62
++ A +Y+RLL+KTQH+ Y+TF K R+ + L+ K +D R+
Sbjct 581 IEFADIIYKRLLEKTQHIQVVINYSTFIISKLHDNKLNREFILGILNKYKERQFDYQRSI 640
Query 63 LLEHWLALEREGGDAQA-------IQRVFRLLPKKI 91
LL++WL+LE + I+ V RLLP+ I
Sbjct 641 LLKYWLSLEEKLASKNIDPESNIWIEIVNRLLPRTI 676
> ath:AT3G17040 HCF107; HCF107 (HIGH CHLOROPHYLL FLUORESCENT 107);
binding
Length=652
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query 1 GALDRARALYE--RLLDKTQHVNAFKGYATFEWKKAEQKDRARQVLNRGLDVCKANGWDE 58
G + RAR L++ + DK +HV A+ G+A E K+ +AR +L +GL C N +
Sbjct 251 GNVRRARELFDAATVADK-KHVAAWHGWANLEIKQG-NISKARNLLAKGLKFCGRNEYIY 308
Query 59 DRAALLE 65
ALLE
Sbjct 309 QTLALLE 315
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query 6 ARALYERLLD-KTQHVNAFKGYATFEWKKAEQKDRARQVLNRGLDVCKANGWDEDRAALL 64
ARAL R + +H + + EWK+ AR++ R L + AN E + L
Sbjct 426 ARALLRRASELDPRHQPVWIAWGWMEWKEGNTTT-ARELYQRALSI-DAN--TESASRCL 481
Query 65 EHWLALEREGGDAQAIQRVFR 85
+ W LE+ G+ A +R+FR
Sbjct 482 QAWGVLEQRAGNLSAARRLFR 502
> cel:F12F6.6 sec-24.1; yeast SEC homolog family member (sec-24.1);
K14007 protein transport protein SEC24
Length=1126
Score = 31.6 bits (70), Expect = 0.62, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 21/26 (80%), Gaps = 0/26 (0%)
Query 71 EREGGDAQAIQRVFRLLPKKIKKRKT 96
E++ G ++A++R +LLP+ I++RKT
Sbjct 1056 EKDNGHSRALRRAIQLLPRGIRERKT 1081
> ath:AT3G51110 crooked neck protein, putative / cell cycle protein,
putative
Length=413
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query 3 LDRARALYERLLDKTQHVNAFKGYATFEWKKAEQKDRARQVLNRGLDVCK 52
++R+R++YER + ++F YA FE K + Q AR V R +++ K
Sbjct 189 IERSRSIYERFVLCHPKASSFIRYAKFEMKNS-QVSLARIVYERAIEMLK 237
> mmu:245857 Ssh3, BC028922, SSH-3, mSSH-3L; slingshot homolog
3 (Drosophila) (EC:3.1.3.16 3.1.3.48); K05766 slingshot
Length=649
Score = 29.6 bits (65), Expect = 2.7, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 14/68 (20%)
Query 26 YATFEWKKAE----QKDRARQVLNRGLDV----------CKANGWDEDRAALLEHWLALE 71
Y EW A QK+R +LN ++ WDE+ A LL HW
Sbjct 334 YLGSEWNAANLEELQKNRVSHILNMAREIDNFFPERFTYYNVRVWDEESAQLLPHWKETH 393
Query 72 REGGDAQA 79
R DA+A
Sbjct 394 RFIEDARA 401
> dre:564788 si:dkey-270k22.4
Length=403
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query 54 NGWDEDRAALLEHWLALEREGGDAQAIQRVFRLLPKKIKKRKTQKNANGVEE 105
NG E+ A L + LAL GDA+AI+++ L K++ R+ K+ + VE+
Sbjct 349 NGEFEESAKLYQEALALAHTAGDAEAIEQLQEGL-KELDNRRNAKDNSKVED 399
> mmu:433719 Gm11487, OTTMUSG00000001246; predicted gene 11487
Length=354
Score = 28.1 bits (61), Expect = 6.8, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query 32 KKAEQKDRARQVLNRGLDVCKANGWDEDRA-ALLEHWLALEREGGD-AQAIQRVFRLLPK 89
K+A ++ R RQ C + W ED LL+ W LE E GD + + L +
Sbjct 15 KEANRRRRLRQEGQSSSGPCDSP-WTEDEIWILLQEWAMLEYELGDPGNKMHAKAKSLSR 73
Query 90 KIKKRKTQKNANGVEEV 106
++ R +K+ N +V
Sbjct 74 RLSNRGLRKSKNSCLDV 90
> mmu:666730 Gm8261, EG666730; predicted gene 8261
Length=283
Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 0/33 (0%)
Query 57 DEDRAALLEHWLALEREGGDAQAIQRVFRLLPK 89
D+DR+ L H E D ++I ++R LP+
Sbjct 139 DDDRSCLHSHMSTAAEEASDDKSIPIIYRSLPE 171
Lambda K H
0.317 0.132 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2003209916
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40