bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_2790_orf1
Length=152
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_026250 ATP-dependent RNA helicase, putative ; K1159... 254 6e-68
tpv:TP03_0478 RNA helicase; K11594 ATP-dependent RNA helicase ... 212 4e-55
bbo:BBOV_IV001840 21.m02846; DEAD/DEAH box helicase (EC:3.6.1.... 205 4e-53
cpv:cgd4_3000 Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+H... 203 2e-52
sce:YPL119C DBP1, LPH8; Dbp1p (EC:3.6.1.-); K11594 ATP-depende... 174 1e-43
xla:379975 ddx3x, MGC52935, pl10; DEAD (Asp-Glu-Ala-Asp) box p... 172 3e-43
xla:397935 an3; ATP dependent RNA helicase (EC:3.6.4.13); K115... 171 7e-43
mmu:13205 Ddx3x, D1Pas1-rs2, Ddx3, Fin14; DEAD/H (Asp-Glu-Ala-... 171 8e-43
hsa:1654 DDX3X, DBX, DDX14, DDX3, HLP2; DEAD (Asp-Glu-Ala-Asp)... 170 2e-42
hsa:8653 DDX3Y, DBY; DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,... 170 2e-42
mmu:110957 D1Pas1, AU016353, Pl10; DNA segment, Chr 1, Pasteur... 169 3e-42
sce:YOR204W DED1, SPP81; ATP-dependent DEAD (Asp-Glu-Ala-Asp)-... 169 3e-42
mmu:26900 Ddx3y, 8030469F12Rik, D1Pas1-rs1, Dby; DEAD (Asp-Glu... 168 7e-42
dre:566947 ddx3, fb74g09, wu:fb74g09, zgc:158804; DEAD (Asp-Gl... 167 1e-41
dre:30116 pl10, etID309900.24, p110, p110a, pl10a, wu:fb43h11,... 167 2e-41
ath:AT3G58510 DEAD box RNA helicase, putative (RH11); K11594 A... 165 7e-41
cel:Y54E10A.9 vbh-1; Vasa- and Belle-like Helicase family memb... 162 3e-40
ath:AT3G58570 DEAD box RNA helicase, putative; K11594 ATP-depe... 162 5e-40
ath:AT2G42520 DEAD box RNA helicase, putative; K11594 ATP-depe... 161 6e-40
hsa:54514 DDX4, MGC111074, VASA; DEAD (Asp-Glu-Ala-Asp) box po... 160 1e-39
mmu:13206 Ddx4, AV206478, Mvh, VASA; DEAD (Asp-Glu-Ala-Asp) bo... 158 5e-39
pfa:PF08_0096 RNA helicase, putative; K11594 ATP-dependent RNA... 158 6e-39
xla:398019 ddx4, vasa, vlg1; DEAD (Asp-Glu-Ala-Asp) box polype... 155 7e-38
cel:Y71H2AM.19 hypothetical protein; K11594 ATP-dependent RNA ... 153 2e-37
dre:30263 vasa, MGC158535, fi24g05, vas, vlg, wu:fi24g05, zgc:... 146 3e-35
cel:C55B7.1 glh-2; Germ-Line Helicase family member (glh-2) 121 1e-27
cel:B0414.6 glh-3; Germ-Line Helicase family member (glh-3) 120 1e-27
cel:T21G5.3 glh-1; Germ-Line Helicase family member (glh-1) 120 2e-27
ath:AT2G47330 DEAD/DEAH box helicase, putative; K12835 ATP-dep... 118 8e-27
pfa:PFE0925c snrnp protein, putative; K12858 ATP-dependent RNA... 117 1e-26
cel:F53H1.1 hypothetical protein; K12811 ATP-dependent RNA hel... 117 1e-26
cel:F01F1.7 ddx-23; DEAD boX helicase homolog family member (d... 117 2e-26
ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-depe... 117 2e-26
ath:AT3G09620 DEAD/DEAH box helicase, putative 116 2e-26
dre:321948 ddx46, fb39a03, wu:fb39a03; DEAD (Asp-Glu-Ala-Asp) ... 116 3e-26
eco:b0797 rhlE, ECK0786, JW0781; ATP-dependent RNA helicase; K... 116 3e-26
ath:AT5G63120 ethylene-responsive DEAD box RNA helicase, putat... 115 5e-26
hsa:9879 DDX46, FLJ25329, KIAA0801, MGC9936, PRPF5, Prp5; DEAD... 115 8e-26
dre:334283 ddx23, wu:fi39b12, zgc:63742; DEAD (Asp-Glu-Ala-Asp... 114 9e-26
mmu:212880 Ddx46, 2200005K02Rik, 8430438J23Rik, AI325430, AI95... 114 9e-26
hsa:9416 DDX23, MGC8416, PRPF28, U5-100K, U5-100KD, prp28; DEA... 114 9e-26
mmu:74351 Ddx23, 3110082M05Rik, 4921506D17Rik; DEAD (Asp-Glu-A... 114 1e-25
ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823 A... 113 2e-25
dre:322206 ddx5, wu:fa56a07, wu:fb11e01, wu:fb16c10, wu:fb53b0... 113 3e-25
ath:AT2G33730 DEAD box RNA helicase, putative; K12858 ATP-depe... 112 4e-25
sce:YBR237W PRP5, RNA5; Prp5p (EC:3.6.1.-); K12811 ATP-depende... 112 4e-25
mmu:432554 Gm12183, OTTMUSG00000005521; predicted gene 12183; ... 111 1e-24
tpv:TP03_0532 ATP-dependent RNA helicase; K12811 ATP-dependent... 110 1e-24
tpv:TP04_0265 small nuclear ribonucleoprotein; K12858 ATP-depe... 110 2e-24
dre:556764 similar to Probable RNA-dependent helicase p72 (DEA... 110 2e-24
> tgo:TGME49_026250 ATP-dependent RNA helicase, putative ; K11594
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=734
Score = 254 bits (650), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 118/153 (77%), Positives = 137/153 (89%), Gaps = 1/153 (0%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
++NV+RVNY++PTPIQKNSIPTIL+GRDLMACAQTGSGKTAAFLYPIIA+MLQ GPP LP
Sbjct 242 LQNVSRVNYTKPTPIQKNSIPTILSGRDLMACAQTGSGKTAAFLYPIIARMLQDGPPPLP 301
Query 61 ASERGSTSAYRRS-VFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQL 119
+ G S YR+ +P+CLVLSPTRELAMQIY+EARKFQFGTG+RTV VYGGS +KRQL
Sbjct 302 QAAAGGGSGYRKPPAYPICLVLSPTRELAMQIYEEARKFQFGTGVRTVAVYGGSDVKRQL 361
Query 120 MDLDAGCDICVATPGRLADVLERRKIRLALVRY 152
+DLD GCDICVATPGRL D+LERRK+RL LV++
Sbjct 362 IDLDGGCDICVATPGRLVDLLERRKVRLGLVQF 394
> tpv:TP03_0478 RNA helicase; K11594 ATP-dependent RNA helicase
[EC:3.6.4.13]
Length=741
Score = 212 bits (539), Expect = 4e-55, Method: Composition-based stats.
Identities = 100/150 (66%), Positives = 121/150 (80%), Gaps = 3/150 (2%)
Query 3 NVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPAS 62
N+ +VNY++PTPIQK+SIP ILAGRDLMACAQTGSGKTAAFL PI+ ML+TGPP P
Sbjct 237 NIRKVNYTKPTPIQKHSIPVILAGRDLMACAQTGSGKTAAFLLPIVTSMLRTGPPKQPTL 296
Query 63 ERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLMDL 122
S R PVCLVLSPTRELA+QI+ E+RKF FGTGIRTV +YGGS+++RQL++L
Sbjct 297 ---SPLYGARVALPVCLVLSPTRELAVQIFSESRKFNFGTGIRTVVLYGGSEVRRQLIEL 353
Query 123 DAGCDICVATPGRLADVLERRKIRLALVRY 152
+ GCDICVATPGRL D++ERRKI ++Y
Sbjct 354 ERGCDICVATPGRLTDLVERRKIIFTCIKY 383
> bbo:BBOV_IV001840 21.m02846; DEAD/DEAH box helicase (EC:3.6.1.-);
K11594 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=609
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 100/152 (65%), Positives = 118/152 (77%), Gaps = 3/152 (1%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
M N+ RVNY++PTPIQK+SIP I+AGRDLMACAQTGSGKTAAFL PI ML+TGPPA
Sbjct 161 MVNILRVNYTKPTPIQKHSIPVIMAGRDLMACAQTGSGKTAAFLLPICTAMLKTGPPA-- 218
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
S +S + R PVCLVLSPTRELAMQ + EARKF + TGIR V +YGG +++RQL
Sbjct 219 -SRPMQSSYHSRQALPVCLVLSPTRELAMQTFTEARKFIYNTGIRAVVLYGGGEVRRQLY 277
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
+L+ GCDICVATPGRL D+LER +I L V Y
Sbjct 278 ELERGCDICVATPGRLTDILERNRIGLHCVSY 309
> cpv:cgd4_3000 Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+HELICc)
; K11594 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=702
Score = 203 bits (517), Expect = 2e-52, Method: Composition-based stats.
Identities = 93/152 (61%), Positives = 120/152 (78%), Gaps = 3/152 (1%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
++N+ RV Y RPTP+QK SIPT+L GRDLMACAQTGSGKTAAFL+PI+ +ML GPP P
Sbjct 213 LDNIRRVKYERPTPVQKFSIPTVLNGRDLMACAQTGSGKTAAFLFPIVMKMLNDGPPPTP 272
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+ S+ +R +PV LVLSPTRELA+Q Y+E+RKF FGTGIRT +YGGS+++ Q+M
Sbjct 273 ---QQSSLRIKRMAYPVALVLSPTRELAIQTYEESRKFCFGTGIRTNVLYGGSEVRSQIM 329
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
DLD G DI VATPGRL D+++R K+ L L+++
Sbjct 330 DLDRGSDIIVATPGRLRDLIDRGKVNLKLIKF 361
> sce:YPL119C DBP1, LPH8; Dbp1p (EC:3.6.1.-); K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=617
Score = 174 bits (440), Expect = 1e-43, Method: Composition-based stats.
Identities = 78/152 (51%), Positives = 109/152 (71%), Gaps = 3/152 (1%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
MEN+ ++++PTP+QK SIP + GRDLMACAQTGSGKT FL+P+ ++ ++GP +P
Sbjct 166 MENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVP 225
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+ S Y R +P LVL+PTRELA QI++EARKF + + +R VYGG+ I Q+
Sbjct 226 EK---AQSFYSRKGYPSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMR 282
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
++D GCD+ VATPGRL D+LER K+ LA ++Y
Sbjct 283 EVDRGCDLLVATPGRLNDLLERGKVSLANIKY 314
> xla:379975 ddx3x, MGC52935, pl10; DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3, X-linked; K11594 ATP-dependent RNA helicase
[EC:3.6.4.13]
Length=697
Score = 172 bits (437), Expect = 3e-43, Method: Composition-based stats.
Identities = 81/152 (53%), Positives = 107/152 (70%), Gaps = 0/152 (0%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
M N+ Y+RPTP+QK++IP I+ RDLMACAQTGSGKTAAFL PI++Q+ GP
Sbjct 233 MGNIQLTRYTRPTPVQKHAIPIIIGKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDAM 292
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+ + RR FP+ LVL+PTRELA+QIY+EARKF + + +R VYGG+ I +Q+
Sbjct 293 KHLKDNGRYGRRKQFPLSLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIR 352
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
DL+ GC + VATPGRL D++ER KI L +Y
Sbjct 353 DLERGCHLLVATPGRLVDMMERGKIGLDFCKY 384
> xla:397935 an3; ATP dependent RNA helicase (EC:3.6.4.13); K11594
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=697
Score = 171 bits (434), Expect = 7e-43, Method: Composition-based stats.
Identities = 81/152 (53%), Positives = 107/152 (70%), Gaps = 0/152 (0%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
M N+ Y+RPTP+QK++IP I+ RDLMACAQTGSGKTAAFL PI++Q+ GP
Sbjct 233 MGNIQLTRYTRPTPVQKHAIPIIIEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDAM 292
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+ + RR FP+ LVL+PTRELA+QIY+EARKF + + +R VYGG+ I +Q+
Sbjct 293 KHLQENGRYGRRKQFPLSLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIR 352
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
DL+ GC + VATPGRL D++ER KI L +Y
Sbjct 353 DLERGCHLLVATPGRLVDMMERGKIGLDFCKY 384
> mmu:13205 Ddx3x, D1Pas1-rs2, Ddx3, Fin14; DEAD/H (Asp-Glu-Ala-Asp/His)
box polypeptide 3, X-linked (EC:3.6.4.13); K11594
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=662
Score = 171 bits (433), Expect = 8e-43, Method: Composition-based stats.
Identities = 80/152 (52%), Positives = 108/152 (71%), Gaps = 0/152 (0%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
M N+ Y+RPTP+QK++IP I RDLMACAQTGSGKTAAFL PI++Q+ GP
Sbjct 192 MGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEAL 251
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+ + + RR +P+ LVL+PTRELA+QIY+EARKF + + +R VYGG++I +Q+
Sbjct 252 RAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIR 311
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
DL+ GC + VATPGRL D++ER KI L +Y
Sbjct 312 DLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
> hsa:1654 DDX3X, DBX, DDX14, DDX3, HLP2; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 3, X-linked (EC:3.6.4.13); K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=661
Score = 170 bits (431), Expect = 2e-42, Method: Composition-based stats.
Identities = 80/152 (52%), Positives = 107/152 (70%), Gaps = 0/152 (0%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
M N+ Y+RPTP+QK++IP I RDLMACAQTGSGKTAAFL PI++Q+ GP
Sbjct 192 MGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEAL 251
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+ + + RR +P+ LVL+PTRELA+QIY+EARKF + + +R VYGG+ I +Q+
Sbjct 252 RAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIR 311
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
DL+ GC + VATPGRL D++ER KI L +Y
Sbjct 312 DLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
> hsa:8653 DDX3Y, DBY; DEAD (Asp-Glu-Ala-Asp) box polypeptide
3, Y-linked (EC:3.6.4.13); K11594 ATP-dependent RNA helicase
[EC:3.6.4.13]
Length=660
Score = 170 bits (430), Expect = 2e-42, Method: Composition-based stats.
Identities = 80/152 (52%), Positives = 107/152 (70%), Gaps = 0/152 (0%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
M N+ Y+RPTP+QK++IP I RDLMACAQTGSGKTAAFL PI++Q+ GP
Sbjct 190 MGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEAL 249
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+ + + RR +P+ LVL+PTRELA+QIY+EARKF + + +R VYGG+ I +Q+
Sbjct 250 KAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIR 309
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
DL+ GC + VATPGRL D++ER KI L +Y
Sbjct 310 DLERGCHLLVATPGRLVDMMERGKIGLDFCKY 341
> mmu:110957 D1Pas1, AU016353, Pl10; DNA segment, Chr 1, Pasteur
Institute 1 (EC:3.6.4.13); K11594 ATP-dependent RNA helicase
[EC:3.6.4.13]
Length=660
Score = 169 bits (429), Expect = 3e-42, Method: Composition-based stats.
Identities = 80/152 (52%), Positives = 107/152 (70%), Gaps = 0/152 (0%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
M N+ Y+RPTP+QK++IP I RDLMACAQTGSGKTAAFL PI++Q+ GP
Sbjct 191 MGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEAL 250
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+ + + RR +P+ LVL+PTRELA+QIY+EARKF + + +R VYGG+ I +Q+
Sbjct 251 RAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIR 310
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
DL+ GC + VATPGRL D++ER KI L +Y
Sbjct 311 DLERGCHLLVATPGRLVDMMERGKIGLDFCKY 342
> sce:YOR204W DED1, SPP81; ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box
RNA helicase, required for translation initiation of all
yeast mRNAs; mutations in human DEAD-box DBY are a frequent
cause of male infertility (EC:3.6.1.-); K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=604
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 109/152 (71%), Gaps = 3/152 (1%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
+EN+ +++PTP+QK S+P + GRDLMACAQTGSGKT FL+P++++ +TGP P
Sbjct 154 LENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQP 213
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
S+ S Y+R +P ++++PTRELA QI+ EA+KF + + ++ VYGGS I QL
Sbjct 214 ESQ---GSFYQRKAYPTAVIMAPTRELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLR 270
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
+++ GCD+ VATPGRL D+LER KI LA V+Y
Sbjct 271 EIERGCDLLVATPGRLNDLLERGKISLANVKY 302
> mmu:26900 Ddx3y, 8030469F12Rik, D1Pas1-rs1, Dby; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 3, Y-linked (EC:3.6.4.13); K11594
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=658
Score = 168 bits (425), Expect = 7e-42, Method: Composition-based stats.
Identities = 79/152 (51%), Positives = 106/152 (69%), Gaps = 0/152 (0%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
M N+ Y+RPTP+QK++IP I RDLMACAQTGSGKTAAFL PI++Q+ GP
Sbjct 191 MGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEAL 250
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+ + + RR +P+ LVL+PTRELA+QIY+EARKF + + +R VYGG+ +Q+
Sbjct 251 KAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIR 310
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
DL+ GC + VATPGRL D++ER KI L +Y
Sbjct 311 DLERGCHLLVATPGRLVDMMERGKIGLDFCKY 342
> dre:566947 ddx3, fb74g09, wu:fb74g09, zgc:158804; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 3; K11594 ATP-dependent RNA helicase
[EC:3.6.4.13]
Length=709
Score = 167 bits (423), Expect = 1e-41, Method: Composition-based stats.
Identities = 83/157 (52%), Positives = 107/157 (68%), Gaps = 5/157 (3%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGP---- 56
M N+ Y+RPTP+QK +IP I RDLMACAQTGSGKTAAFL P+++Q+ GP
Sbjct 235 MGNITLSRYTRPTPVQKYAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQIYSEGPGEAL 294
Query 57 PALPASERGSTSAY-RRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQI 115
A AS + Y RR +P+ LVL+PTRELA+QIY EARKF + + +R VYGG+ I
Sbjct 295 QATKASTQQENGKYVRRKQYPISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADI 354
Query 116 KRQLMDLDAGCDICVATPGRLADVLERRKIRLALVRY 152
+Q+ DL+ GC + VATPGRL D++ER KI L +Y
Sbjct 355 GQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCKY 391
> dre:30116 pl10, etID309900.24, p110, p110a, pl10a, wu:fb43h11,
wu:fy72b06; pl10; K11594 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=688
Score = 167 bits (422), Expect = 2e-41, Method: Composition-based stats.
Identities = 83/156 (53%), Positives = 110/156 (70%), Gaps = 4/156 (2%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGP-PAL 59
M N+ Y+RPTP+QK++IP I + RDLMACAQTGSGKTAAFL P+++Q+ GP AL
Sbjct 220 MGNINLSRYTRPTPVQKHAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQIYTDGPGEAL 279
Query 60 PASERGS--TSAY-RRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIK 116
A++ + Y RR +P+ LVL+PTRELA+QIY EARKF + + +R VYGG+ I
Sbjct 280 QAAKNSAQENGKYGRRKQYPISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIG 339
Query 117 RQLMDLDAGCDICVATPGRLADVLERRKIRLALVRY 152
+Q+ DL+ GC + VATPGRL D++ER KI L Y
Sbjct 340 QQIRDLERGCHLLVATPGRLLDMMERGKIGLDYCNY 375
> ath:AT3G58510 DEAD box RNA helicase, putative (RH11); K11594
ATP-dependent RNA helicase [EC:3.6.4.13]
Length=612
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 110/150 (73%), Gaps = 8/150 (5%)
Query 3 NVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPAS 62
N+ R Y RPTP+Q+++IP +LA RDLMACAQTGSGKTAAF +PII+ +++ P
Sbjct 165 NIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERP-- 222
Query 63 ERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLMDL 122
RGS R+V+P ++LSPTRELA QI+ EA+KF + TG++ V YGG+ I +QL +L
Sbjct 223 -RGS-----RAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLREL 276
Query 123 DAGCDICVATPGRLADVLERRKIRLALVRY 152
+ GCDI VATPGRL D+LER ++ + ++R+
Sbjct 277 ERGCDILVATPGRLNDLLERARVSMQMIRF 306
> cel:Y54E10A.9 vbh-1; Vasa- and Belle-like Helicase family member
(vbh-1); K11594 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=641
Score = 162 bits (411), Expect = 3e-40, Method: Composition-based stats.
Identities = 87/155 (56%), Positives = 109/155 (70%), Gaps = 8/155 (5%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPAL- 59
MENV R YS+PTP+QK+SIPT+LA RDLM+CAQTGSGKTAAFL PII +L GP +
Sbjct 132 MENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVK 191
Query 60 -PASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKR- 117
PA G RR+ +P LVLSPTRELA+QI++EA KF + + I+T +YGG + R
Sbjct 192 PPAFTNG-----RRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRD 246
Query 118 QLMDLDAGCDICVATPGRLADVLERRKIRLALVRY 152
Q+ L AG I +ATPGRL D++E+ I LA RY
Sbjct 247 QVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRY 281
> ath:AT3G58570 DEAD box RNA helicase, putative; K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=646
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 107/150 (71%), Gaps = 8/150 (5%)
Query 3 NVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPAS 62
N+ R Y +PTP+Q+N+IP + AGRDLMACAQTGSGKTAAF +PII+ +++ P
Sbjct 160 NIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRG 219
Query 63 ERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLMDL 122
RG V+P+ ++LSPTRELA QI+ EARKF + TG++ V YGG+ + +Q+ +L
Sbjct 220 VRG--------VYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIREL 271
Query 123 DAGCDICVATPGRLADVLERRKIRLALVRY 152
+ G DI VATPGRL D+LER ++ L +VR+
Sbjct 272 ERGVDILVATPGRLNDLLERGRVSLQMVRF 301
> ath:AT2G42520 DEAD box RNA helicase, putative; K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=633
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 110/150 (73%), Gaps = 8/150 (5%)
Query 3 NVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPAS 62
N+ R Y +PTP+Q+++IP +L GRDLMACAQTGSGKTAAF +PII+ +++ P
Sbjct 173 NIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRP-- 230
Query 63 ERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLMDL 122
RGS R+V+P+ ++LSPTRELA QI+ EA+KF + TG++ V YGG+ I +QL +L
Sbjct 231 -RGS-----RTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLREL 284
Query 123 DAGCDICVATPGRLADVLERRKIRLALVRY 152
+ G DI VATPGRL D+LER ++ + ++R+
Sbjct 285 ERGVDILVATPGRLNDLLERARVSMQMIRF 314
> hsa:54514 DDX4, MGC111074, VASA; DEAD (Asp-Glu-Ala-Asp) box
polypeptide 4 (EC:3.6.4.13); K13982 probable ATP-dependent RNA
helicase DDX4 [EC:3.6.4.13]
Length=690
Score = 160 bits (406), Expect = 1e-39, Method: Composition-based stats.
Identities = 77/150 (51%), Positives = 102/150 (68%), Gaps = 9/150 (6%)
Query 3 NVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPAS 62
N+A+ Y++ TP+QK SIP ILAGRDLMACAQTGSGKTAAFL PI+A M+ G A
Sbjct 268 NIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITA---- 323
Query 63 ERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLMDL 122
S ++ P C++++PTREL QIY EARKF FGT +R V +YGG+Q+ + +
Sbjct 324 -----SRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQI 378
Query 123 DAGCDICVATPGRLADVLERRKIRLALVRY 152
GC+I ATPGRL D++ + KI L ++Y
Sbjct 379 VQGCNILCATPGRLMDIIGKEKIGLKQIKY 408
> mmu:13206 Ddx4, AV206478, Mvh, VASA; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 4 (EC:3.6.4.13); K13982 probable ATP-dependent
RNA helicase DDX4 [EC:3.6.4.13]
Length=728
Score = 158 bits (400), Expect = 5e-39, Method: Composition-based stats.
Identities = 77/150 (51%), Positives = 102/150 (68%), Gaps = 9/150 (6%)
Query 3 NVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPAS 62
N+A+ Y++ TP+QK SIP +LAGRDLMACAQTGSGKTAAFL PI+A M++ G A
Sbjct 301 NIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITA---- 356
Query 63 ERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLMDL 122
S ++ P C++++PTREL QIY EARKF FGT +R V +YGG+Q + +
Sbjct 357 -----SRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSVRQI 411
Query 123 DAGCDICVATPGRLADVLERRKIRLALVRY 152
GC+I ATPGRL D++ + KI L V+Y
Sbjct 412 VQGCNILCATPGRLMDIIGKEKIGLKQVKY 441
> pfa:PF08_0096 RNA helicase, putative; K11594 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=941
Score = 158 bits (400), Expect = 6e-39, Method: Composition-based stats.
Identities = 77/152 (50%), Positives = 104/152 (68%), Gaps = 3/152 (1%)
Query 4 VARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPASE 63
+ +VNY + TPIQK S+ I+ DL+ AQTGSGKTA +L PII ML PP E
Sbjct 377 IKKVNYDKTTPIQKYSLNIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDPPKHTYYE 436
Query 64 RGSTSA---YRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+ + ++ + R P+CL+L+PTRELA+QI+ +A+KF F TGI+ V +YGG+ IK QL
Sbjct 437 QNNKTSNYYFNRVCLPICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLS 496
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
+LD G DI VATPGRL D+LE+ KI+L L +
Sbjct 497 NLDKGADIIVATPGRLNDILEKGKIKLFLTTF 528
> xla:398019 ddx4, vasa, vlg1; DEAD (Asp-Glu-Ala-Asp) box polypeptide
4 (EC:3.6.4.13); K13982 probable ATP-dependent RNA helicase
DDX4 [EC:3.6.4.13]
Length=700
Score = 155 bits (391), Expect = 7e-38, Method: Composition-based stats.
Identities = 78/150 (52%), Positives = 102/150 (68%), Gaps = 9/150 (6%)
Query 3 NVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPAS 62
NVAR Y + TP+QK+SIP I+AGRDLMACAQTGSGKTAAFL PI++ M+ G A
Sbjct 288 NVARAGYVKLTPVQKHSIPIIMAGRDLMACAQTGSGKTAAFLLPILSYMMNEGITA---- 343
Query 63 ERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLMDL 122
S Y + P ++++PTREL QIY +ARKF +GT +R V VYGG Q + D+
Sbjct 344 -----SQYLQLQEPEAIIIAPTRELINQIYLDARKFSYGTCVRPVVVYGGIQPVHAMRDV 398
Query 123 DAGCDICVATPGRLADVLERRKIRLALVRY 152
+ GC+I ATPGRL D++ + KI L+ +RY
Sbjct 399 EKGCNILCATPGRLLDIVSKEKIGLSKLRY 428
> cel:Y71H2AM.19 hypothetical protein; K11594 ATP-dependent RNA
helicase [EC:3.6.4.13]
Length=643
Score = 153 bits (386), Expect = 2e-37, Method: Composition-based stats.
Identities = 77/152 (50%), Positives = 103/152 (67%), Gaps = 3/152 (1%)
Query 2 ENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPA 61
EN+ Y RPTP+QK SIP + GRDLM+CAQTGSGKTAAFL P++ +LQ GP A+
Sbjct 179 ENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHR 238
Query 62 SERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQ-IKRQLM 120
S ++S R+ +P LVLSPTREL++QI+ E+RKF + T I + +YGG + K Q+
Sbjct 239 SV--TSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIH 296
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
L GC I +ATPGRL DV+++ I + RY
Sbjct 297 KLRLGCHILIATPGRLIDVMDQGLIGMEGCRY 328
> dre:30263 vasa, MGC158535, fi24g05, vas, vlg, wu:fi24g05, zgc:109812,
zgc:158535; vasa homolog (EC:3.6.4.13); K13982 probable
ATP-dependent RNA helicase DDX4 [EC:3.6.4.13]
Length=716
Score = 146 bits (368), Expect = 3e-35, Method: Composition-based stats.
Identities = 75/151 (49%), Positives = 98/151 (64%), Gaps = 9/151 (5%)
Query 2 ENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPA 61
+NV++ Y +PTP+QK+ IP I AGRDLMACAQTGSGKTAAFL PI+ + + G A
Sbjct 290 KNVSKSGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQRFMTDGVAASKF 349
Query 62 SERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLMD 121
SE P ++++PTREL QIY EARKF +GT +R V VYGG + +
Sbjct 350 SEIQE---------PEAIIVAPTRELINQIYLEARKFAYGTCVRPVVVYGGINTGYTIRE 400
Query 122 LDAGCDICVATPGRLADVLERRKIRLALVRY 152
+ GC++ ATPGRL D++ R KI L+ VRY
Sbjct 401 VLKGCNVLCATPGRLHDLIGRGKIGLSKVRY 431
> cel:C55B7.1 glh-2; Germ-Line Helicase family member (glh-2)
Length=974
Score = 121 bits (303), Expect = 1e-27, Method: Composition-based stats.
Identities = 63/151 (41%), Positives = 87/151 (57%), Gaps = 9/151 (5%)
Query 2 ENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPA 61
+NVA Y++ TPIQ+ ++P I G D+MACAQTGSGKTAAFL PI+A+++
Sbjct 565 KNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLI--------- 615
Query 62 SERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLMD 121
E +A +P C++L+PTREL QIY E RKF + T + PVYGG +
Sbjct 616 DENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQ 675
Query 122 LDAGCDICVATPGRLADVLERRKIRLALVRY 152
++ G I V T GR+ E I+L R+
Sbjct 676 IEKGATIIVGTVGRIKHFCEEGTIKLDKCRF 706
> cel:B0414.6 glh-3; Germ-Line Helicase family member (glh-3)
Length=720
Score = 120 bits (302), Expect = 1e-27, Method: Composition-based stats.
Identities = 62/150 (41%), Positives = 87/150 (58%), Gaps = 9/150 (6%)
Query 3 NVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPAS 62
NV R Y+R TPIQ+ ++P + G+D++ACAQTGSGKTAAFL PI+++++
Sbjct 312 NVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLIL--------- 362
Query 63 ERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLMDL 122
E+ +P C++L+PTRELA QIY E RKF + + + PVYGG + +
Sbjct 363 EKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQI 422
Query 123 DAGCDICVATPGRLADVLERRKIRLALVRY 152
GC I V T GR+ E I+L RY
Sbjct 423 MKGCTIIVGTIGRVKHFCEDGAIKLDKCRY 452
> cel:T21G5.3 glh-1; Germ-Line Helicase family member (glh-1)
Length=763
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 87/151 (57%), Gaps = 9/151 (5%)
Query 2 ENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPA 61
+NVA YS+ TPIQ+ ++P + G D+MACAQTGSGKTAAFL PI+ +++
Sbjct 354 KNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLI--------- 404
Query 62 SERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLMD 121
+ +A +P C++L+PTRELA QIY E RKF + T + PVYGG +
Sbjct 405 DDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQ 464
Query 122 LDAGCDICVATPGRLADVLERRKIRLALVRY 152
++ G I V T GR+ E I+L R+
Sbjct 465 IEKGATIIVGTVGRIKHFCEEGTIKLDKCRF 495
> ath:AT2G47330 DEAD/DEAH box helicase, putative; K12835 ATP-dependent
RNA helicase DDX42 [EC:3.6.4.13]
Length=760
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 90/152 (59%), Gaps = 13/152 (8%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
M + + Y +PT IQ ++P +L+GRD++ A+TGSGKTAAF+ P+I ++ P L
Sbjct 240 MSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQ--PEL- 296
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+R P+ ++ +PTRELA QI+ EA+KF G+R VYGG Q
Sbjct 297 ----------QRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFK 346
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
+L AGC+I VATPGRL D+L+ + + + Y
Sbjct 347 ELKAGCEIVVATPGRLIDMLKMKALTMMRASY 378
> pfa:PFE0925c snrnp protein, putative; K12858 ATP-dependent RNA
helicase DDX23/PRP28 [EC:3.6.4.13]
Length=1123
Score = 117 bits (294), Expect = 1e-26, Method: Composition-based stats.
Identities = 59/142 (41%), Positives = 83/142 (58%), Gaps = 10/142 (7%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
++ + + Y +PTPIQ +IP L RDL+ A+TGSGKTAAF+ P+++ + Q P
Sbjct 710 LKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLSYVKQLPPLTYE 769
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
S+ G P LV++P+RELA+QIY+E KF RTV V GG + Q
Sbjct 770 TSQDG----------PYALVIAPSRELAIQIYEETNKFASYCSCRTVAVVGGRNAEAQAF 819
Query 121 DLDAGCDICVATPGRLADVLER 142
+L G +I + TPGRL D LE+
Sbjct 820 ELRRGVEIVIGTPGRLQDCLEK 841
> cel:F53H1.1 hypothetical protein; K12811 ATP-dependent RNA helicase
DDX46/PRP5 [EC:3.6.4.13]
Length=970
Score = 117 bits (293), Expect = 1e-26, Method: Composition-based stats.
Identities = 61/140 (43%), Positives = 83/140 (59%), Gaps = 13/140 (9%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
M + + YS+PT IQ +IP+I++GRD++ A+TGSGKT AFL P+ +L P
Sbjct 316 MNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ-----P 370
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
E G P+ ++L+PTRELAMQ Y+EA KF G++ YGG I Q+
Sbjct 371 ELEEGDG--------PIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIA 422
Query 121 DLDAGCDICVATPGRLADVL 140
DL G +I V TPGR+ DVL
Sbjct 423 DLKRGAEIVVCTPGRMIDVL 442
> cel:F01F1.7 ddx-23; DEAD boX helicase homolog family member
(ddx-23); K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=730
Score = 117 bits (292), Expect = 2e-26, Method: Composition-based stats.
Identities = 65/151 (43%), Positives = 89/151 (58%), Gaps = 9/151 (5%)
Query 2 ENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPA 61
+ V + Y PTPIQ+ +IP L RD++ A+TGSGKTAAFL P++ + +LP
Sbjct 314 QAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWI-----TSLPK 368
Query 62 SERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLMD 121
ER R + P ++++PTRELA QI +E KF GI+TV V GG+ + Q M
Sbjct 369 MERQE----HRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMK 424
Query 122 LDAGCDICVATPGRLADVLERRKIRLALVRY 152
L G ++ +ATPGRL DVLE R + L Y
Sbjct 425 LRMGVEVVIATPGRLLDVLENRYLLLNQCTY 455
> ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=828
Score = 117 bits (292), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/140 (41%), Positives = 88/140 (62%), Gaps = 13/140 (9%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
++ + ++NY +P PIQ ++P I++GRD + A+TGSGKT F+ P++ + ++ PP
Sbjct 203 LDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPML-RHIKDQPPV-- 259
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
E G P+ LV++PTREL QI+ + RKF GIR VPVYGGS + +Q+
Sbjct 260 --EAGDG--------PIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQIS 309
Query 121 DLDAGCDICVATPGRLADVL 140
+L G +I V TPGR+ D+L
Sbjct 310 ELKRGTEIVVCTPGRMIDIL 329
> ath:AT3G09620 DEAD/DEAH box helicase, putative
Length=989
Score = 116 bits (291), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/140 (41%), Positives = 87/140 (62%), Gaps = 13/140 (9%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
++ + ++NY +P PIQ ++P I++GRD + A+TGSGKT F+ P++ + ++ PP
Sbjct 408 LDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPML-RHIKDQPPV-- 464
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
E G P+ LV++PTREL QIY + RKF GI VPVYGGS + +Q+
Sbjct 465 --EAGDG--------PIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQIS 514
Query 121 DLDAGCDICVATPGRLADVL 140
+L G +I V TPGR+ D+L
Sbjct 515 ELKRGTEIVVCTPGRMIDIL 534
> dre:321948 ddx46, fb39a03, wu:fb39a03; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 46 (EC:3.6.4.13); K12811 ATP-dependent RNA
helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1018
Score = 116 bits (290), Expect = 3e-26, Method: Composition-based stats.
Identities = 59/144 (40%), Positives = 85/144 (59%), Gaps = 13/144 (9%)
Query 8 NYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPASERGST 67
NY +PTPIQ +IP I++GRDL+ A+TGSGKT AFL P+ +L P
Sbjct 359 NYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQRPVG--------- 409
Query 68 SAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLMDLDAGCD 127
+ P+ ++++PTRELA+QI +E +KF +R V VYGG+ I Q+ +L G +
Sbjct 410 ----EAEGPLAVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQIAELKRGAE 465
Query 128 ICVATPGRLADVLERRKIRLALVR 151
I V TPGR+ D+L R+ +R
Sbjct 466 IIVCTPGRMIDMLGANNGRVTNLR 489
> eco:b0797 rhlE, ECK0786, JW0781; ATP-dependent RNA helicase;
K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Length=454
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 87/147 (59%), Gaps = 12/147 (8%)
Query 4 VARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPASE 63
VA Y PTPIQ+ +IP +L GRDLMA AQTG+GKTA F P++ ++ P A
Sbjct 16 VAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHA----- 70
Query 64 RGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLMDLD 123
+G RR V L+L+PTRELA QI + R + IR++ V+GG I Q+M L
Sbjct 71 KG-----RRPVR--ALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLR 123
Query 124 AGCDICVATPGRLADVLERRKIRLALV 150
G D+ VATPGRL D+ + ++L V
Sbjct 124 GGVDVLVATPGRLLDLEHQNAVKLDQV 150
> ath:AT5G63120 ethylene-responsive DEAD box RNA helicase, putative
(RH30)
Length=484
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 92/152 (60%), Gaps = 13/152 (8%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
+E +A++ ++ PTPIQ P L GRDL+ A+TGSGKT A+L P + + + P L
Sbjct 177 LEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHV--SAQPRL- 233
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+ G P+ L+L+PTRELA+QI +E+RKF +G+R+ +YGG+ Q+
Sbjct 234 GQDDG----------PIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIR 283
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
DL G +I +ATPGRL D+LE + L V Y
Sbjct 284 DLRRGVEIVIATPGRLIDMLECQHTNLKRVTY 315
> hsa:9879 DDX46, FLJ25329, KIAA0801, MGC9936, PRPF5, Prp5; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 46 (EC:3.6.4.13); K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1031
Score = 115 bits (287), Expect = 8e-26, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 90/151 (59%), Gaps = 13/151 (8%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
+ ++ + Y +PTPIQ +IP I++GRDL+ A+TGSGKT AFL P+ ++
Sbjct 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ-----R 438
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+ E G P+ ++++PTRELA+QI +E +KF G+R V VYGG+ I Q+
Sbjct 439 SLEEGEG--------PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIA 490
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVR 151
+L G +I V TPGR+ D+L R+ +R
Sbjct 491 ELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 521
> dre:334283 ddx23, wu:fi39b12, zgc:63742; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 23 (EC:3.6.1.-); K12858 ATP-dependent RNA
helicase DDX23/PRP28 [EC:3.6.4.13]
Length=807
Score = 114 bits (286), Expect = 9e-26, Method: Composition-based stats.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 9/152 (5%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
+E + + Y PTPIQ+ +IP L RD++ A+TGSGKTAAFL P++ + LP
Sbjct 390 LEVIEKCGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI-----TTLP 444
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+R S P ++L+PTRELA QI +E KF GIRTV V GG + Q
Sbjct 445 KIDRIEDSDQG----PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGF 500
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
L GC+I +ATPGRL DVLE R + L+ Y
Sbjct 501 RLRMGCEIVIATPGRLIDVLENRYLVLSRCTY 532
> mmu:212880 Ddx46, 2200005K02Rik, 8430438J23Rik, AI325430, AI957095,
MGC116676, MGC31579, mKIAA0801; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 46 (EC:3.6.4.13); K12811 ATP-dependent RNA
helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1031
Score = 114 bits (286), Expect = 9e-26, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 90/151 (59%), Gaps = 13/151 (8%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
+ ++ + Y +PTPIQ +IP I++GRDL+ A+TGSGKT AFL P+ ++
Sbjct 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ-----R 438
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+ E G P+ ++++PTRELA+QI +E +KF G+R V VYGG+ I Q+
Sbjct 439 SLEEGEG--------PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIA 490
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVR 151
+L G +I V TPGR+ D+L R+ +R
Sbjct 491 ELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 521
> hsa:9416 DDX23, MGC8416, PRPF28, U5-100K, U5-100KD, prp28; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 23 (EC:3.6.4.13); K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=820
Score = 114 bits (286), Expect = 9e-26, Method: Composition-based stats.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 9/152 (5%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
+E + + Y PTPIQ+ +IP L RD++ A+TGSGKTAAFL P++ + LP
Sbjct 403 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI-----TTLP 457
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+R S P ++L+PTRELA QI +E KF GIRTV V GG + Q
Sbjct 458 KIDRIEESDQG----PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGF 513
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
L GC+I +ATPGRL DVLE R + L+ Y
Sbjct 514 RLRMGCEIVIATPGRLIDVLENRYLVLSRCTY 545
> mmu:74351 Ddx23, 3110082M05Rik, 4921506D17Rik; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 23 (EC:3.6.1.-); K12858 ATP-dependent
RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=819
Score = 114 bits (286), Expect = 1e-25, Method: Composition-based stats.
Identities = 67/152 (44%), Positives = 88/152 (57%), Gaps = 9/152 (5%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
+E + + Y PTPIQ+ +IP L RD++ A+TGSGKTAAFL P++ + LP
Sbjct 402 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI-----TTLP 456
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
+R S P ++L+PTRELA QI +E KF GIRTV V GG + Q
Sbjct 457 KIDRIEESDQG----PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGF 512
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
L GC+I +ATPGRL DVLE R + L+ Y
Sbjct 513 RLRMGCEIVIATPGRLIDVLENRYLVLSRCTY 544
> ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=501
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 84/152 (55%), Gaps = 13/152 (8%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
+E V + ++ PTPIQ P + GRDL+ A+TGSGKT ++L P I + A P
Sbjct 111 LEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHV-----NAQP 165
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
G P+ LVL+PTRELA+QI QEA KF + I+T +YGG Q+
Sbjct 166 MLAHGDG--------PIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVR 217
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
DL G +I +ATPGRL D++E L V Y
Sbjct 218 DLQKGVEIVIATPGRLIDMMESNNTNLRRVTY 249
> dre:322206 ddx5, wu:fa56a07, wu:fb11e01, wu:fb16c10, wu:fb53b05;
DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (EC:3.6.1.-);
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=518
Score = 113 bits (282), Expect = 3e-25, Method: Composition-based stats.
Identities = 61/152 (40%), Positives = 87/152 (57%), Gaps = 13/152 (8%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
M+ + + N++ PTPIQ P L+G+D++ AQTGSGKT ++L P I + P
Sbjct 108 MDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQ-----P 162
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
E G P+CLVL+PTRELA Q+ Q A ++ + I++ +YGG+ Q+
Sbjct 163 FLEHGDG--------PICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPQGPQIR 214
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
DL+ G +IC+ATPGRL D LE K L Y
Sbjct 215 DLERGVEICIATPGRLIDFLEAGKTNLRRCTY 246
> ath:AT2G33730 DEAD box RNA helicase, putative; K12858 ATP-dependent
RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=733
Score = 112 bits (281), Expect = 4e-25, Method: Composition-based stats.
Identities = 61/143 (42%), Positives = 84/143 (58%), Gaps = 10/143 (6%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
++ V R Y +P+PIQ +IP L RD++ A+TGSGKTAAF+ P++A + + P
Sbjct 325 LKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPP---- 380
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
SE T P +V++PTRELA QI +E KF G R + GG I+ Q +
Sbjct 381 MSEENETEG------PYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGL 434
Query 121 DLDAGCDICVATPGRLADVLERR 143
+ GC+I +ATPGRL D LERR
Sbjct 435 KITQGCEIVIATPGRLIDCLERR 457
> sce:YBR237W PRP5, RNA5; Prp5p (EC:3.6.1.-); K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=849
Score = 112 bits (280), Expect = 4e-25, Method: Composition-based stats.
Identities = 57/136 (41%), Positives = 88/136 (64%), Gaps = 13/136 (9%)
Query 6 RVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPASERG 65
++++ TPIQ ++P I++GRD++ ++TGSGKT ++L P++ Q+ P L E G
Sbjct 273 KLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRP--LSKHETG 330
Query 66 STSAYRRSVFPVCLVLSPTRELAMQIYQEARKF-QFGTGIRTVPVYGGSQIKRQLMDLDA 124
P+ L+L+PTRELA+QI++E KF + T IR+V GGS++K+Q+ DL
Sbjct 331 ----------PMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKR 380
Query 125 GCDICVATPGRLADVL 140
G +I VATPGR D+L
Sbjct 381 GTEIVVATPGRFIDIL 396
> mmu:432554 Gm12183, OTTMUSG00000005521; predicted gene 12183;
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=670
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 87/152 (57%), Gaps = 13/152 (8%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
M+ +AR N++ PT IQ P L+G D++ AQTGSGKT ++L P I ++ P
Sbjct 161 MDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHIIHQ-----P 215
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
ERG P+CLVL+PTRELA Q+ Q A ++ +++ +YGG+ Q+
Sbjct 216 FLERGDG--------PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIR 267
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
DL+ G +IC+ATPGRL D LE K L Y
Sbjct 268 DLERGVEICIATPGRLIDFLECGKTNLRRTTY 299
> tpv:TP03_0532 ATP-dependent RNA helicase; K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=894
Score = 110 bits (276), Expect = 1e-24, Method: Composition-based stats.
Identities = 61/143 (42%), Positives = 80/143 (55%), Gaps = 13/143 (9%)
Query 9 YSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALPASERGSTS 68
Y +P PIQ IP ++ GRD++ A+TGSGKT AFL P I +L P
Sbjct 437 YEKPFPIQMQCIPALMCGRDVIGIAETGSGKTLAFLLPGIRHVLDQPP------------ 484
Query 69 AYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLMDLDAGCDI 128
R S + L+++PTREL +QI E KF G+RT+ VYGG+ I QL L G +I
Sbjct 485 -LRESDGMIVLIIAPTRELVIQISNECAKFSKSVGLRTLAVYGGAGIGEQLNALKRGAEI 543
Query 129 CVATPGRLADVLERRKIRLALVR 151
V TPGRL DVL K ++ +R
Sbjct 544 VVGTPGRLIDVLTLSKGKVTNLR 566
> tpv:TP04_0265 small nuclear ribonucleoprotein; K12858 ATP-dependent
RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=744
Score = 110 bits (275), Expect = 2e-24, Method: Composition-based stats.
Identities = 61/152 (40%), Positives = 83/152 (54%), Gaps = 10/152 (6%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
+E + + Y +PTPIQ +IP L RDL+ A TGSGKTAAF+ P++ + + P
Sbjct 341 LEAIKKAGYIKPTPIQMQAIPIALEMRDLIGIAVTGSGKTAAFVLPMLTYVKKLPPLDDE 400
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
S G P LVL+P+RELA+QIY E KF R+V V GG + Q
Sbjct 401 TSLDG----------PYALVLAPSRELALQIYDETVKFSAFCSCRSVAVVGGRNAETQAF 450
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
+L GC+I + TPGR+ D L+R L+ Y
Sbjct 451 ELRKGCEIIIGTPGRVKDCLDRAYTVLSQCNY 482
> dre:556764 similar to Probable RNA-dependent helicase p72 (DEAD-box
protein p72) (DEAD-box protein 17); K13178 ATP-dependent
RNA helicase DDX17 [EC:3.6.4.13]
Length=671
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 85/152 (55%), Gaps = 13/152 (8%)
Query 1 MENVARVNYSRPTPIQKNSIPTILAGRDLMACAQTGSGKTAAFLYPIIAQMLQTGPPALP 60
M+ + + N+ PT IQ P L+GRD++ AQTGSGKT A+L P I + P
Sbjct 107 MDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ-----P 161
Query 61 ASERGSTSAYRRSVFPVCLVLSPTRELAMQIYQEARKFQFGTGIRTVPVYGGSQIKRQLM 120
ERG P+CLVL+PTRELA Q+ Q A + + I++ VYGG+ Q+
Sbjct 162 YLERGDG--------PICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIR 213
Query 121 DLDAGCDICVATPGRLADVLERRKIRLALVRY 152
DL+ G +IC+ATPGRL D LE K L Y
Sbjct 214 DLERGVEICIATPGRLIDFLEVGKTNLRRCTY 245
Lambda K H
0.323 0.136 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3264639800
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40