bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_2923_orf1
Length=142
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_021650 ATP-dependent RNA helicase, putative (EC:3.1... 242 2e-64
bbo:BBOV_I004920 19.m02284; DEAD/DEAH box helicase and helicas... 214 7e-56
pfa:PFE0430w ATP-dependent RNA Helicase, putative; K12811 ATP-... 192 3e-49
tpv:TP03_0532 ATP-dependent RNA helicase; K12811 ATP-dependent... 185 5e-47
dre:321948 ddx46, fb39a03, wu:fb39a03; DEAD (Asp-Glu-Ala-Asp) ... 167 7e-42
ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-depe... 160 2e-39
cpv:cgd8_800 Prp5p C terminal KH. eIF4A-1-family RNA SFII heli... 157 1e-38
cel:F53H1.1 hypothetical protein; K12811 ATP-dependent RNA hel... 150 1e-36
mmu:212880 Ddx46, 2200005K02Rik, 8430438J23Rik, AI325430, AI95... 148 5e-36
hsa:9879 DDX46, FLJ25329, KIAA0801, MGC9936, PRPF5, Prp5; DEAD... 148 5e-36
bbo:BBOV_II004470 18.m06373; p68-like protein; K12823 ATP-depe... 127 8e-30
ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823 A... 125 5e-29
cel:F01F1.7 ddx-23; DEAD boX helicase homolog family member (d... 123 2e-28
ath:AT1G31970 STRS1; STRS1 (STRESS RESPONSE SUPPRESSOR 1); ATP... 121 6e-28
cel:F58E10.3 hypothetical protein; K12823 ATP-dependent RNA he... 120 9e-28
tgo:TGME49_036650 DEAD/DEAH box helicase, putative (EC:5.99.1.... 120 1e-27
cpv:cgd2_1010 hypothetical protein ; K12823 ATP-dependent RNA ... 119 2e-27
tpv:TP04_0562 RNA helicase; K12823 ATP-dependent RNA helicase ... 119 2e-27
ath:AT2G33730 DEAD box RNA helicase, putative; K12858 ATP-depe... 119 3e-27
dre:334283 ddx23, wu:fi39b12, zgc:63742; DEAD (Asp-Glu-Ala-Asp... 119 4e-27
ath:AT5G51280 DEAD-box protein abstrakt, putative; K13116 ATP-... 118 6e-27
ath:AT3G06480 DEAD box RNA helicase, putative 118 7e-27
hsa:9416 DDX23, MGC8416, PRPF28, U5-100K, U5-100KD, prp28; DEA... 117 9e-27
mmu:74351 Ddx23, 3110082M05Rik, 4921506D17Rik; DEAD (Asp-Glu-A... 117 9e-27
mmu:67040 Ddx17, 2610007K22Rik, A430025E01Rik, AI047725, C8092... 117 1e-26
mmu:72935 Ddx41, 2900024F02Rik, AA958953, ABS, AI324246; DEAD ... 117 1e-26
xla:398649 ddx17, MGC80019; DEAD (Asp-Glu-Ala-Asp) box polypep... 117 1e-26
hsa:51428 DDX41, ABS, MGC8828; DEAD (Asp-Glu-Ala-Asp) box poly... 117 1e-26
hsa:10521 DDX17, DKFZp761H2016, P72, RH70; DEAD (Asp-Glu-Ala-A... 117 1e-26
sce:YOR204W DED1, SPP81; ATP-dependent DEAD (Asp-Glu-Ala-Asp)-... 115 4e-26
dre:556764 similar to Probable RNA-dependent helicase p72 (DEA... 115 6e-26
mmu:72047 Ddx42, 1810047H21Rik, AW319508, AW556242, B430002H05... 114 9e-26
ath:AT4G33370 DEAD-box protein abstrakt, putative 114 9e-26
tgo:TGME49_098020 DEAD-box ATP-dependent RNA helicase, putativ... 114 1e-25
bbo:BBOV_IV001840 21.m02846; DEAD/DEAH box helicase (EC:3.6.1.... 114 1e-25
pfa:PF14_0437 helicase, putative 114 1e-25
ath:AT5G14610 ATP binding / ATP-dependent helicase/ helicase/ ... 113 2e-25
hsa:11325 DDX42, FLJ43179, RHELP, RNAHP, SF3b125; DEAD (Asp-Gl... 113 2e-25
dre:322206 ddx5, wu:fa56a07, wu:fb11e01, wu:fb16c10, wu:fb53b0... 112 4e-25
tpv:TP03_0478 RNA helicase; K11594 ATP-dependent RNA helicase ... 111 8e-25
sce:YGL078C DBP3; Dbp3p (EC:3.6.1.-); K14811 ATP-dependent RNA... 111 9e-25
dre:503932 ddx42, im:7148194, zgc:111815; DEAD (Asp-Glu-Ala-As... 110 1e-24
ath:AT3G09620 DEAD/DEAH box helicase, putative 110 1e-24
sce:YPL119C DBP1, LPH8; Dbp1p (EC:3.6.1.-); K11594 ATP-depende... 110 1e-24
xla:380261 ddx42, MGC54025; DEAD (Asp-Glu-Ala-Asp) box polypep... 110 2e-24
mmu:432554 Gm12183, OTTMUSG00000005521; predicted gene 12183; ... 109 3e-24
hsa:55510 DDX43, CT13, DKFZp434H2114, HAGE; DEAD (Asp-Glu-Ala-... 108 4e-24
cel:H27M09.1 hypothetical protein; K13116 ATP-dependent RNA he... 108 5e-24
pfa:PFE0925c snrnp protein, putative; K12858 ATP-dependent RNA... 108 5e-24
cpv:cgd4_3000 Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+H... 108 5e-24
> tgo:TGME49_021650 ATP-dependent RNA helicase, putative (EC:3.1.3.69
3.4.21.72); K12811 ATP-dependent RNA helicase DDX46/PRP5
[EC:3.6.4.13]
Length=1544
Score = 242 bits (618), Expect = 2e-64, Method: Composition-based stats.
Identities = 112/141 (79%), Positives = 129/141 (91%), Gaps = 0/141 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
QYVEVM+EERKF+RLLQLLG+WQ++GS+IIFVN+Q+EADELF ELLKYGYQA LHGGQD
Sbjct 1196 QYVEVMEEERKFFRLLQLLGEWQEHGSVIIFVNRQVEADELFTELLKYGYQAATLHGGQD 1255
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
QTDREFTIQEF+DG +TLLIATSVAARGLD VLVIN CP+HIEDYVHRIGRTGRAG
Sbjct 1256 QTDREFTIQEFQDGVRTLLIATSVAARGLDCKHCVLVINMTCPNHIEDYVHRIGRTGRAG 1315
Query 121 NIGVSYTFITPQEADKAEELE 141
IGV+YTF+T ++ADKA++LE
Sbjct 1316 RIGVAYTFLTKEDADKADDLE 1336
> bbo:BBOV_I004920 19.m02284; DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein (EC:3.6.1.-);
K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=994
Score = 214 bits (545), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 93/140 (66%), Positives = 121/140 (86%), Gaps = 0/140 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q+V V+ E +K Y LL+LLG+W ++GSII+FVN+Q++AD ++AEL+K+GY VLHGGQD
Sbjct 611 QHVMVLPERQKMYALLKLLGEWHEHGSIIVFVNRQLDADSMYAELIKHGYDCAVLHGGQD 670
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
QTDREFT+Q+F+DGTK +LIATS+AARG+DV +VVLVIN+ P HIEDYVHR+GRTGRAG
Sbjct 671 QTDREFTLQDFRDGTKGILIATSIAARGIDVKNVVLVINYATPDHIEDYVHRVGRTGRAG 730
Query 121 NIGVSYTFITPQEADKAEEL 140
NIG SYTFITP+E K+ ++
Sbjct 731 NIGTSYTFITPEEGAKSHDI 750
> pfa:PFE0430w ATP-dependent RNA Helicase, putative; K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1490
Score = 192 bits (488), Expect = 3e-49, Method: Composition-based stats.
Identities = 86/140 (61%), Positives = 113/140 (80%), Gaps = 0/140 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q+VE+++E +K +RLL+LLG+W YG ++IFVNKQIEAD L+ EL KY Y LVLHGGQD
Sbjct 946 QFVEIIEESKKVFRLLKLLGEWIKYGLVLIFVNKQIEADLLYLELYKYDYNLLVLHGGQD 1005
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
QTDR+FT+++FK +LIATSV ARG+D+ +++LVIN+ CP HIEDY+HRIGRTGR+
Sbjct 1006 QTDRQFTLEKFKKEENKVLIATSVMARGIDIKNIILVINYQCPDHIEDYIHRIGRTGRSN 1065
Query 121 NIGVSYTFITPQEADKAEEL 140
NIG +YTFI P E KA ++
Sbjct 1066 NIGYAYTFILPNEYTKAYDI 1085
> tpv:TP03_0532 ATP-dependent RNA helicase; K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=894
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 119/140 (85%), Gaps = 0/140 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q+V V+++++K +LL+LLG+W ++G+IIIFVN Q+E++ LF +LL YGY+A +LHGG D
Sbjct 640 QHVVVLNDDKKLLKLLKLLGEWHEHGNIIIFVNTQLESEHLFNDLLAYGYEAGILHGGVD 699
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
QTDREFT+ +F++G KT+LIATS+AARG+DV SVVLVIN+ P H EDYVHR+GRTGRAG
Sbjct 700 QTDREFTLNDFREGKKTILIATSIAARGIDVKSVVLVINYAAPDHFEDYVHRVGRTGRAG 759
Query 121 NIGVSYTFITPQEADKAEEL 140
IG SYTF+TP+EA K+ ++
Sbjct 760 TIGTSYTFLTPEEAAKSHDI 779
> dre:321948 ddx46, fb39a03, wu:fb39a03; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 46 (EC:3.6.4.13); K12811 ATP-dependent RNA
helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1018
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/148 (56%), Positives = 108/148 (72%), Gaps = 6/148 (4%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q+V V++EE+KF +LL++LG +Q+ GS+IIFV+KQ AD L +L+K Y + LHGG D
Sbjct 563 QHVIVIEEEKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGID 622
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q DR+ I +FK+G LL+ATSVAARGLDV ++LV+N+ CP+H EDYVHR GRTGRAG
Sbjct 623 QYDRDSIINDFKNGACRLLVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRAG 682
Query 121 NIGVSYTFITPQEAD------KAEELEG 142
N G +YTFIT +A KA EL G
Sbjct 683 NKGYAYTFITEGQARYSGDILKALELSG 710
> ath:AT1G20920 DEAD box RNA helicase, putative; K12811 ATP-dependent
RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=828
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 99/140 (70%), Gaps = 0/140 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q VEV E +F RLL+LLG+W + G I++FV Q + D L+ +++K Y L LHGG+D
Sbjct 414 QLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKD 473
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
QTDRE TI +FK+ LLIATSVAARGLDV + LV+NF P+H EDYVHR+GRTGRAG
Sbjct 474 QTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAG 533
Query 121 NIGVSYTFITPQEADKAEEL 140
G + TFI+ +A A +L
Sbjct 534 RKGCAVTFISEDDAKYAPDL 553
> cpv:cgd8_800 Prp5p C terminal KH. eIF4A-1-family RNA SFII helicase
Length=934
Score = 157 bits (396), Expect = 1e-38, Method: Composition-based stats.
Identities = 73/151 (48%), Positives = 101/151 (66%), Gaps = 11/151 (7%)
Query 1 QYVEVMDEER-KFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQ 59
QY+E+++ E +F RLLQLLG+W ++G I+IF N+Q + DELFA+L+ +GY L LH GQ
Sbjct 458 QYIELLNNENDQFLRLLQLLGEWAEFGLIVIFCNRQTDVDELFAKLIPFGYNCLTLHSGQ 517
Query 60 DQTDREFTIQEFKDGT----------KTLLIATSVAARGLDVPSVVLVINFCCPSHIEDY 109
D DR + F + +LIATS+ +RGL V +++LVINF P HIEDY
Sbjct 518 DHYDRHSNLTTFSKTNMNSNPPPPSGQNILIATSIFSRGLHVDNILLVINFGAPHHIEDY 577
Query 110 VHRIGRTGRAGNIGVSYTFITPQEADKAEEL 140
+HRIGRTGRAGN G S+T + P E ++ +L
Sbjct 578 IHRIGRTGRAGNFGTSFTLLLPNEIPQSFDL 608
> cel:F53H1.1 hypothetical protein; K12811 ATP-dependent RNA helicase
DDX46/PRP5 [EC:3.6.4.13]
Length=970
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 102/137 (74%), Gaps = 1/137 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALV-LHGGQ 59
Q + E +KF +LL+LLG + + GS I+FV+KQ +AD++ +L++ GY ++ LHGG
Sbjct 527 QNAVICAEHQKFLKLLELLGMYYEEGSSIVFVDKQEKADDIVDQLMRTGYNSVAPLHGGI 586
Query 60 DQTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRA 119
DQ DR+ +I +FK G +L+ATSVAARGLDV +++LV+N+ CP+H EDYVHR+GRTGRA
Sbjct 587 DQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRA 646
Query 120 GNIGVSYTFITPQEADK 136
G G +YTF+ P+ +K
Sbjct 647 GRKGYAYTFVLPEHQEK 663
> mmu:212880 Ddx46, 2200005K02Rik, 8430438J23Rik, AI325430, AI957095,
MGC116676, MGC31579, mKIAA0801; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 46 (EC:3.6.4.13); K12811 ATP-dependent RNA
helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1031
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 87/115 (75%), Gaps = 0/115 (0%)
Query 20 GDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQDQTDREFTIQEFKDGTKTLL 79
G +Q+ GS+IIFV+KQ AD L +L++ Y + LHGG DQ DR+ I +FK+GT LL
Sbjct 614 GHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLL 673
Query 80 IATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAGNIGVSYTFITPQEA 134
+ATSVAARGLDV ++LV+N+ CP+H EDYVHR GRTGRAGN G +YTFIT +A
Sbjct 674 VATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQA 728
> hsa:9879 DDX46, FLJ25329, KIAA0801, MGC9936, PRPF5, Prp5; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 46 (EC:3.6.4.13); K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Length=1031
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 87/115 (75%), Gaps = 0/115 (0%)
Query 20 GDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQDQTDREFTIQEFKDGTKTLL 79
G +Q+ GS+IIFV+KQ AD L +L++ Y + LHGG DQ DR+ I +FK+GT LL
Sbjct 614 GHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLL 673
Query 80 IATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAGNIGVSYTFITPQEA 134
+ATSVAARGLDV ++LV+N+ CP+H EDYVHR GRTGRAGN G +YTFIT +A
Sbjct 674 VATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQA 728
> bbo:BBOV_II004470 18.m06373; p68-like protein; K12823 ATP-dependent
RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=529
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 89/140 (63%), Gaps = 0/140 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q V V++E K +L ++LG I+IF + + AD + EL G+ AL +HG +
Sbjct 330 QEVFVIEEHEKRSQLKKILGQIGQGTKILIFTDTKKTADSITKELRLDGWPALSIHGDKK 389
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q +R + + EFK G +++AT VA+RGLDV V +VINF P+ IEDYVHRIGRTGR G
Sbjct 390 QEERNWVLNEFKSGKHPIMVATDVASRGLDVRDVKVVINFDFPNQIEDYVHRIGRTGRGG 449
Query 121 NIGVSYTFITPQEADKAEEL 140
N G SYTF+TP + A EL
Sbjct 450 NKGASYTFLTPDKNRVAREL 469
> ath:AT1G55150 DEAD box RNA helicase, putative (RH20); K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=501
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 91/140 (65%), Gaps = 0/140 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q V+V+ E +K+ +L++LL D D I++F++ + D++ +L G+ AL +HG +
Sbjct 320 QIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKS 379
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q +R++ + EF+ G ++ AT VAARGLDV V VIN+ P +EDYVHRIGRTGRAG
Sbjct 380 QAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAG 439
Query 121 NIGVSYTFITPQEADKAEEL 140
G +YTF T A A+EL
Sbjct 440 AKGTAYTFFTVANARFAKEL 459
> cel:F01F1.7 ddx-23; DEAD boX helicase homolog family member
(ddx-23); K12858 ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=730
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 87/131 (66%), Gaps = 1/131 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q V ++ E+RK +L+++L + Q IIIFVN++ AD L L K G++ VLHGG+
Sbjct 550 QVVYMVPEDRKRKKLVEVL-ESQFQPPIIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKG 608
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q RE+ +Q K+GT +L+AT VA RG+DV V LV+N+ IEDY HRIGRTGRAG
Sbjct 609 QDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAG 668
Query 121 NIGVSYTFITP 131
G + TF+TP
Sbjct 669 KHGKAITFLTP 679
> ath:AT1G31970 STRS1; STRS1 (STRESS RESPONSE SUPPRESSOR 1); ATP
binding / ATP-dependent helicase/ helicase/ nucleic acid
binding; K14811 ATP-dependent RNA helicase DBP3 [EC:3.6.4.13]
Length=537
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDY--GSIIIFVNKQIEADELFAELLKYGYQALVLHGG 58
Q +EV+DE + RL+ LL + +++F ++EA+ L L + G++A+ +HG
Sbjct 340 QIIEVLDERARDQRLIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGN 399
Query 59 QDQTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGR 118
+ Q++R ++ FK+G+ LL+AT VAARGLD+P V +VIN+ P EDYVHRIGRTGR
Sbjct 400 KAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGR 459
Query 119 AGNIGVSYTFITPQEADKAEEL 140
AG GV++TF TP A EL
Sbjct 460 AGKKGVAHTFFTPLNKGLAGEL 481
> cel:F58E10.3 hypothetical protein; K12823 ATP-dependent RNA
helicase DDX5/DBP2 [EC:3.6.4.13]
Length=561
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Query 1 QYVEVMDEERKFYRLLQLLGDW--QDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGG 58
Q V++++E K +L++LL Q IIFV + +ADEL + + G+ L +HG
Sbjct 350 QVVDILEEHAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGD 409
Query 59 QDQTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGR 118
++Q +R++ +QEFK G +++AT VAARGLDV + VIN+ P++ EDYVHRIGRTGR
Sbjct 410 KNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGR 469
Query 119 AGNIGVSYTFITPQEADKAEEL 140
+ G +YTF T A KA++L
Sbjct 470 SDKKGTAYTFFTHTNASKAKDL 491
> tgo:TGME49_036650 DEAD/DEAH box helicase, putative (EC:5.99.1.3);
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=550
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 86/140 (61%), Gaps = 0/140 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q V V+ E K +L+ LL D I+IF + AD L ++ G+ AL LHG +
Sbjct 351 QEVMVVQEYEKRGQLMSLLRRIMDGSKILIFAETKRGADNLTRDMRVEGWPALSLHGDKK 410
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q +R + + EFK+G +++AT VA+RGLDV + VIN+ P+ IEDY+HRIGRTGRAG
Sbjct 411 QEERTWVLDEFKNGRNPIMVATDVASRGLDVKDIRHVINYDMPNQIEDYIHRIGRTGRAG 470
Query 121 NIGVSYTFITPQEADKAEEL 140
G +YTF TP + A EL
Sbjct 471 AKGCAYTFFTPDKPRLAREL 490
> cpv:cgd2_1010 hypothetical protein ; K12823 ATP-dependent RNA
helicase DDX5/DBP2 [EC:3.6.4.13]
Length=586
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Query 1 QYVEVMDEERKFYRLLQLLGDW--QDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGG 58
QYV V++E K +L LG + ++IF + AD L EL G+ AL +HG
Sbjct 391 QYVNVVEESEKKAKLKMFLGQVMVESAPKVLIFCETKRGADILTKELRLDGWPALCIHGD 450
Query 59 QDQTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGR 118
+ Q +R + + EF+ G ++IAT VAARGLD+ + VINF P+ IEDY+HRIGRTGR
Sbjct 451 KKQEERTWVLNEFRTGASPIMIATDVAARGLDIKDINFVINFDFPNQIEDYIHRIGRTGR 510
Query 119 AGNIGVSYTFITPQEADKAEEL 140
AG GVS +F TP + A +L
Sbjct 511 AGATGVSLSFFTPDKYRMASDL 532
> tpv:TP04_0562 RNA helicase; K12823 ATP-dependent RNA helicase
DDX5/DBP2 [EC:3.6.4.13]
Length=635
Score = 119 bits (299), Expect = 2e-27, Method: Composition-based stats.
Identities = 68/140 (48%), Positives = 87/140 (62%), Gaps = 0/140 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q V +++E K +L +LL D G I+IF + AD L EL G+ AL +HG +
Sbjct 432 QNVFILEEREKRVKLKELLKKLMDGGKILIFSETKKGADTLTRELRLDGWPALCIHGDKK 491
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q +R + + EFK G ++IAT VA+RGLDV V VIN+ P IEDYVHRIGRTGRAG
Sbjct 492 QEERTWVLNEFKSGKHPIMIATDVASRGLDVRDVKYVINYDFPGQIEDYVHRIGRTGRAG 551
Query 121 NIGVSYTFITPQEADKAEEL 140
G SYTF+TP + A EL
Sbjct 552 MKGSSYTFLTPDKFKSAREL 571
> ath:AT2G33730 DEAD box RNA helicase, putative; K12858 ATP-dependent
RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=733
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q+V +M E KF+RL +LL + + + I+FVN + D + L K GY+ LHGG+
Sbjct 553 QHVIMMKESEKFFRLQKLLDELGE-KTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKS 611
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q RE +++ F+ +L+AT V RG+D+P V VIN+ P HIE Y HRIGRTGRAG
Sbjct 612 QEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAG 671
Query 121 NIGVSYTFIT 130
GV+ +F+T
Sbjct 672 KSGVATSFLT 681
> dre:334283 ddx23, wu:fi39b12, zgc:63742; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 23 (EC:3.6.1.-); K12858 ATP-dependent RNA
helicase DDX23/PRP28 [EC:3.6.4.13]
Length=807
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 85/134 (63%), Gaps = 1/134 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q V +M E K +LL++L + IIIFVN++ D L L K GY A LHGG+
Sbjct 628 QKVILMSEGEKRKKLLEVLASGFE-PPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKG 686
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q REF + K G K +L+AT VA RG+D+ V +V+N+ +IEDY+HRIGRTGRAG
Sbjct 687 QEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVLNYDMAKNIEDYIHRIGRTGRAG 746
Query 121 NIGVSYTFITPQEA 134
GV+ TF+T +++
Sbjct 747 KSGVAMTFLTKEDS 760
> ath:AT5G51280 DEAD-box protein abstrakt, putative; K13116 ATP-dependent
RNA helicase DDX41 [EC:3.6.4.13]
Length=591
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 86/135 (63%), Gaps = 2/135 (1%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q VE + +E K LL+ L + ++IF + + D++ LL G +A+ +HGG+D
Sbjct 375 QEVEYVKQEAKIVYLLECL--QKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKD 432
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q DRE+ I FK G K +L+AT VA++GLD P + VIN+ P+ IE+YVHRIGRTGR G
Sbjct 433 QEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCG 492
Query 121 NIGVSYTFITPQEAD 135
G++ TFI +++
Sbjct 493 KTGIATTFINKNQSE 507
> ath:AT3G06480 DEAD box RNA helicase, putative
Length=1088
Score = 118 bits (295), Expect = 7e-27, Method: Composition-based stats.
Identities = 60/140 (42%), Positives = 91/140 (65%), Gaps = 1/140 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
QYVEV+ + K RL Q+L + +IIF + + D L + ++ + A+V+HG +
Sbjct 656 QYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVGRH-FGAVVIHGDKT 714
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q +R++ + +F+ G +LIAT VAARGLD+ + +VIN+ P+ +EDYVHRIGRTGRAG
Sbjct 715 QGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAG 774
Query 121 NIGVSYTFITPQEADKAEEL 140
GV++TF T Q+ A +L
Sbjct 775 ATGVAFTFFTEQDWKYAPDL 794
> hsa:9416 DDX23, MGC8416, PRPF28, U5-100K, U5-100KD, prp28; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 23 (EC:3.6.4.13); K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=820
Score = 117 bits (294), Expect = 9e-27, Method: Composition-based stats.
Identities = 65/141 (46%), Positives = 87/141 (61%), Gaps = 1/141 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q V +M E K +LL +L D IIIFVN++ D L L K GY A LHGG+
Sbjct 641 QKVFLMSESEKRKKLLAILEQGFD-PPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKG 699
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q REF + K G K +L+AT VA RG+D+ V +V+N+ +IEDY+HRIGRTGRAG
Sbjct 700 QEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAG 759
Query 121 NIGVSYTFITPQEADKAEELE 141
GV+ TF+T +++ EL+
Sbjct 760 KSGVAITFLTKEDSAVFYELK 780
> mmu:74351 Ddx23, 3110082M05Rik, 4921506D17Rik; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 23 (EC:3.6.1.-); K12858 ATP-dependent
RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Length=819
Score = 117 bits (294), Expect = 9e-27, Method: Composition-based stats.
Identities = 65/141 (46%), Positives = 87/141 (61%), Gaps = 1/141 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q V +M E K +LL +L D IIIFVN++ D L L K GY A LHGG+
Sbjct 640 QKVFLMSESEKRKKLLAILEQGFD-PPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKG 698
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q REF + K G K +L+AT VA RG+D+ V +V+N+ +IEDY+HRIGRTGRAG
Sbjct 699 QEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAG 758
Query 121 NIGVSYTFITPQEADKAEELE 141
GV+ TF+T +++ EL+
Sbjct 759 KSGVAITFLTKEDSAVFYELK 779
> mmu:67040 Ddx17, 2610007K22Rik, A430025E01Rik, AI047725, C80929,
Gm926, MGC79147, p72; DEAD (Asp-Glu-Ala-Asp) box polypeptide
17 (EC:3.6.4.13); K13178 ATP-dependent RNA helicase DDX17
[EC:3.6.4.13]
Length=650
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query 1 QYVEVMDEERKFYRLLQLLGD--WQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGG 58
Q V+V E K ++L+QL+ + + IIFV + D+L + + G+ A+ +HG
Sbjct 313 QIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGD 372
Query 59 QDQTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGR 118
+ Q +R++ + EF+ G +LIAT VA+RGLDV V VIN+ P+ EDYVHRIGRT R
Sbjct 373 KSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTAR 432
Query 119 AGNIGVSYTFITPQEADKAEEL 140
+ N G +YTF TP +A EL
Sbjct 433 STNKGTAYTFFTPGNLKQAREL 454
> mmu:72935 Ddx41, 2900024F02Rik, AA958953, ABS, AI324246; DEAD
(Asp-Glu-Ala-Asp) box polypeptide 41 (EC:3.6.4.13); K13116
ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]
Length=622
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q VE + EE K LL+ L + ++IF K+ + D + LL G +A+ +HGG+D
Sbjct 410 QEVEYVKEEAKMVYLLECL--QKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKD 467
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q +R I+ F++G K +L+AT VA++GLD P++ VIN+ P IE+YVHRIGRTGR+G
Sbjct 468 QEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSG 527
Query 121 NIGVSYTFIT 130
N G++ TFI
Sbjct 528 NTGIATTFIN 537
> xla:398649 ddx17, MGC80019; DEAD (Asp-Glu-Ala-Asp) box polypeptide
17; K13178 ATP-dependent RNA helicase DDX17 [EC:3.6.4.13]
Length=610
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query 1 QYVEVMDEERKFYRLLQLLGD--WQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGG 58
Q V+V E K ++L+QL+ + + IIFV + DEL + + G+ A+ +HG
Sbjct 303 QIVDVCQESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDELTRRMRRDGWPAMCIHGD 362
Query 59 QDQTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGR 118
+ Q +R++ + EF+ G +LIAT VA+RGLDV + VIN+ P+ EDYVHRIGRT R
Sbjct 363 KSQQERDWVLCEFRTGKAPILIATDVASRGLDVEDIKFVINYDYPNSSEDYVHRIGRTAR 422
Query 119 AGNIGVSYTFITPQEADKAEEL 140
+ N G +YTF TP +A EL
Sbjct 423 STNKGTAYTFFTPGNLKQAREL 444
> hsa:51428 DDX41, ABS, MGC8828; DEAD (Asp-Glu-Ala-Asp) box polypeptide
41 (EC:3.6.4.13); K13116 ATP-dependent RNA helicase
DDX41 [EC:3.6.4.13]
Length=622
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q VE + EE K LL+ L + ++IF K+ + D + LL G +A+ +HGG+D
Sbjct 410 QEVEYVKEEAKMVYLLECL--QKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKD 467
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q +R I+ F++G K +L+AT VA++GLD P++ VIN+ P IE+YVHRIGRTGR+G
Sbjct 468 QEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSG 527
Query 121 NIGVSYTFIT 130
N G++ TFI
Sbjct 528 NTGIATTFIN 537
> hsa:10521 DDX17, DKFZp761H2016, P72, RH70; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 17 (EC:3.6.4.13); K13178 ATP-dependent
RNA helicase DDX17 [EC:3.6.4.13]
Length=731
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query 1 QYVEVMDEERKFYRLLQLLGD--WQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGG 58
Q V+V E K ++L+QL+ + + IIFV + D+L + + G+ A+ +HG
Sbjct 392 QIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGD 451
Query 59 QDQTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGR 118
+ Q +R++ + EF+ G +LIAT VA+RGLDV V VIN+ P+ EDYVHRIGRT R
Sbjct 452 KSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTAR 511
Query 119 AGNIGVSYTFITPQEADKAEEL 140
+ N G +YTF TP +A EL
Sbjct 512 STNKGTAYTFFTPGNLKQAREL 533
> sce:YOR204W DED1, SPP81; ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box
RNA helicase, required for translation initiation of all
yeast mRNAs; mutations in human DEAD-box DBY are a frequent
cause of male infertility (EC:3.6.1.-); K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=604
Score = 115 bits (288), Expect = 4e-26, Method: Composition-based stats.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 4/134 (2%)
Query 2 YVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQDQ 61
YVE D++ LL D G +IFV + AD+L L+ ++A +HG + Q
Sbjct 380 YVENQDKKSALLDLLSASTD----GLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQ 435
Query 62 TDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAGN 121
++RE + F+ G TLL+AT+VAARGLD+P+V VIN+ PS ++DYVHRIGRTGRAGN
Sbjct 436 SERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGN 495
Query 122 IGVSYTFITPQEAD 135
G++ F + ++
Sbjct 496 TGLATAFFNSENSN 509
> dre:556764 similar to Probable RNA-dependent helicase p72 (DEAD-box
protein p72) (DEAD-box protein 17); K13178 ATP-dependent
RNA helicase DDX17 [EC:3.6.4.13]
Length=671
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Query 1 QYVEVMDEERKFYRLLQLLGD--WQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGG 58
Q V+V E K +L+QL+ + + IIFV + DEL + + G+ A+ +HG
Sbjct 316 QIVDVCMENEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGD 375
Query 59 QDQTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGR 118
+ Q +R++ + EF+ G +LIAT VA+RGLDV V VIN+ P+ EDYVHRIGRT R
Sbjct 376 KSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTAR 435
Query 119 AGNIGVSYTFITPQEADKAEEL 140
+ N G +YTF TP +A +L
Sbjct 436 STNKGTAYTFFTPGNLRQARDL 457
> mmu:72047 Ddx42, 1810047H21Rik, AW319508, AW556242, B430002H05Rik,
RHELP, RNAHP, SF3b125; DEAD (Asp-Glu-Ala-Asp) box polypeptide
42 (EC:3.6.4.13); K12835 ATP-dependent RNA helicase
DDX42 [EC:3.6.4.13]
Length=929
Score = 114 bits (285), Expect = 9e-26, Method: Composition-based stats.
Identities = 59/141 (41%), Positives = 91/141 (64%), Gaps = 1/141 (0%)
Query 1 QYVEVMDE-ERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQ 59
Q VE++ K+ L + L ++ GS+++FV K+ A+EL + L + G+ +LHG
Sbjct 473 QIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELASNLKQEGHNLGLLHGDM 532
Query 60 DQTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRA 119
DQ++R I +FK +L+AT VAARGLD+PS+ VIN+ I+ + HRIGRTGRA
Sbjct 533 DQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRA 592
Query 120 GNIGVSYTFITPQEADKAEEL 140
G GV+YT +TP++++ A +L
Sbjct 593 GEKGVAYTLLTPKDSNFAGDL 613
> ath:AT4G33370 DEAD-box protein abstrakt, putative
Length=542
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q VE + +E K LL+ L + ++IF + + D++ LL G +A+ +HGG+D
Sbjct 326 QEVEYVKQEAKIVYLLECL--QKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKD 383
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q DR++ I FK G K +L+AT VA++GLD P + VIN+ P IE+YVHRIGRTGR G
Sbjct 384 QEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCG 443
Query 121 NIGVSYTFITPQEAD 135
G++ TFI +++
Sbjct 444 KTGIATTFINKNQSE 458
> tgo:TGME49_098020 DEAD-box ATP-dependent RNA helicase, putative
(EC:2.7.11.25); K12858 ATP-dependent RNA helicase DDX23/PRP28
[EC:3.6.4.13]
Length=1158
Score = 114 bits (285), Expect = 1e-25, Method: Composition-based stats.
Identities = 61/134 (45%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q VE + E RK RL +L + +++FVN++ AD L L K GY A LHGG+
Sbjct 984 QRVEFVPEARKKQRLQDVLENATP--PVMVFVNQKKSADALAKVLGKLGYSACSLHGGKA 1041
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q +RE + FK+G+ +L+AT VA RG+DV V LV+NF P IE Y HRIGRTGRAG
Sbjct 1042 QENREAALSSFKEGSHDVLVATDVAGRGIDVEGVQLVVNFDMPKDIEAYTHRIGRTGRAG 1101
Query 121 NIGVSYTFITPQEA 134
G++ +F+T +++
Sbjct 1102 RKGLAISFLTEEDS 1115
> bbo:BBOV_IV001840 21.m02846; DEAD/DEAH box helicase (EC:3.6.1.-);
K11594 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=609
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 92/131 (70%), Gaps = 3/131 (2%)
Query 7 DEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQDQTDREF 66
D+E+K + L++LL + + G ++IFV + AD + + LLK + A+ +HG + Q DRE
Sbjct 388 DQEQKLHYLVKLLRENTN-GLVLIFVETKRRADMIESYLLKENFMAVNIHGDRSQQDREE 446
Query 67 TIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAGNIGVSY 126
++ FK G + +L+AT VAARGLD+ ++ VIN P++I+DYVHRIGRTGRAGN+GV+
Sbjct 447 ALRLFKTGERPILVATDVAARGLDINNITHVINCDLPANIDDYVHRIGRTGRAGNVGVAT 506
Query 127 TFITPQEADKA 137
+ ++ E D++
Sbjct 507 SLVS--EKDRS 515
> pfa:PF14_0437 helicase, putative
Length=527
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 88/141 (62%), Gaps = 1/141 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGD-WQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQ 59
Q + +++E K L LL ++D II+FV + AD + L G AL +HG +
Sbjct 335 QEIYLLEEHEKIGNLKSLLQRIFKDNDRIIVFVETKKNADFITKALRLDGMPALCIHGDK 394
Query 60 DQTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRA 119
Q +R + + EFK G ++IAT VA+RGLD+ +V VINF P+ IEDYVHRIGRTGRA
Sbjct 395 KQEERRWVLNEFKTGKSPIMIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRA 454
Query 120 GNIGVSYTFITPQEADKAEEL 140
G+ G S+TF+T + A++L
Sbjct 455 GSHGASFTFLTADKYRLAKDL 475
> ath:AT5G14610 ATP binding / ATP-dependent helicase/ helicase/
nucleic acid binding / protein binding
Length=712
Score = 113 bits (283), Expect = 2e-25, Method: Composition-based stats.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 1/140 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q +EV+ K RL Q+L + IIIF + + D+L A L + A +HG +
Sbjct 450 QTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTKRMCDQL-ARNLTRTFGAAAIHGDKS 508
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q +R+ + +F+ G +L+AT VAARGLDV + +V+N+ P+ +EDYVHRIGRTGRAG
Sbjct 509 QAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAG 568
Query 121 NIGVSYTFITPQEADKAEEL 140
G++YTF Q+A A +L
Sbjct 569 ATGLAYTFFGDQDAKHASDL 588
> hsa:11325 DDX42, FLJ43179, RHELP, RNAHP, SF3b125; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 42 (EC:3.6.4.13); K12835 ATP-dependent
RNA helicase DDX42 [EC:3.6.4.13]
Length=938
Score = 113 bits (283), Expect = 2e-25, Method: Composition-based stats.
Identities = 59/141 (41%), Positives = 90/141 (63%), Gaps = 1/141 (0%)
Query 1 QYVEVMDE-ERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQ 59
Q VE++ K+ L + L ++ GS+++FV K+ A+EL L + G+ +LHG
Sbjct 473 QIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDM 532
Query 60 DQTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRA 119
DQ++R I +FK +L+AT VAARGLD+PS+ VIN+ I+ + HRIGRTGRA
Sbjct 533 DQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRA 592
Query 120 GNIGVSYTFITPQEADKAEEL 140
G GV+YT +TP++++ A +L
Sbjct 593 GEKGVAYTLLTPKDSNFAGDL 613
> dre:322206 ddx5, wu:fa56a07, wu:fb11e01, wu:fb16c10, wu:fb53b05;
DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (EC:3.6.1.-);
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=518
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 88/142 (61%), Gaps = 2/142 (1%)
Query 1 QYVEVMDEERKFYRLLQLLGD--WQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGG 58
Q V+V ++ K +L++LL + + IIFV + D+L + + G+ A+ +HG
Sbjct 317 QIVDVCNDGEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGD 376
Query 59 QDQTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGR 118
++Q +R++ + EFK G +LIAT VA+RGLDV V VINF P++ EDY+HRIGRT R
Sbjct 377 KNQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTAR 436
Query 119 AGNIGVSYTFITPQEADKAEEL 140
+ G +YTF TP +A +L
Sbjct 437 SQKTGTAYTFFTPNNMKQAHDL 458
> tpv:TP03_0478 RNA helicase; K11594 ATP-dependent RNA helicase
[EC:3.6.4.13]
Length=741
Score = 111 bits (277), Expect = 8e-25, Method: Composition-based stats.
Identities = 54/124 (43%), Positives = 84/124 (67%), Gaps = 1/124 (0%)
Query 7 DEERKFYRLLQLLGDWQDYGSII-IFVNKQIEADELFAELLKYGYQALVLHGGQDQTDRE 65
D+++K L++LL D + G ++ IFV + AD + LL ++A+ +HG + Q DRE
Sbjct 522 DQDQKIKYLIKLLRDNTNLGGLVLIFVETKKRADLIEGYLLSENFKAVNIHGDRSQEDRE 581
Query 66 FTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAGNIGVS 125
+ FK G + +++AT VAARGLD+ ++ VIN P++I+DYVHRIGRTGRAGNIG++
Sbjct 582 KALSLFKAGVRPIMVATDVAARGLDISNITHVINCDLPTNIDDYVHRIGRTGRAGNIGIA 641
Query 126 YTFI 129
+ +
Sbjct 642 TSLV 645
> sce:YGL078C DBP3; Dbp3p (EC:3.6.1.-); K14811 ATP-dependent RNA
helicase DBP3 [EC:3.6.4.13]
Length=523
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query 1 QYVEVMDEERKFYRLLQLLGDW----QDYGSIIIFVNKQIEADELFAELLKYGYQALVLH 56
Q VEV+D K +LL+LL + + ++IF + EA + L GY +H
Sbjct 331 QIVEVVDPRGKERKLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIH 390
Query 57 GGQDQTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRT 116
G Q R + EFK G LL+AT VAARGLD+P+V VIN P +EDYVHRIGRT
Sbjct 391 GDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRT 450
Query 117 GRAGNIGVSYTFITPQE 133
GRAG G ++T T QE
Sbjct 451 GRAGQTGTAHTLFTEQE 467
> dre:503932 ddx42, im:7148194, zgc:111815; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 42 (EC:3.6.1.-); K12835 ATP-dependent RNA
helicase DDX42 [EC:3.6.4.13]
Length=908
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 88/141 (62%), Gaps = 1/141 (0%)
Query 1 QYVEVMDE-ERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQ 59
Q VEV+ + K+ L + L ++ GS+++FV K+ +EL L++ GY +LHG
Sbjct 475 QIVEVLQSGQDKWGWLTRRLVEFTSAGSVLVFVTKKANCEELATNLIQEGYSLGLLHGDM 534
Query 60 DQTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRA 119
DQ++R I +FK +L+AT VAARGLD+PS+ V+N+ I+ + HRIGRTGRA
Sbjct 535 DQSERNKVIADFKKKNLPVLVATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRA 594
Query 120 GNIGVSYTFITPQEADKAEEL 140
G GV+YT +T ++ A +L
Sbjct 595 GEKGVAYTLLTTKDTSFAGDL 615
> ath:AT3G09620 DEAD/DEAH box helicase, putative
Length=989
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 78/140 (55%), Gaps = 29/140 (20%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q VE+ E +F RLL+LLG+W + G +++FV Q
Sbjct 619 QLVEIRPESERFSRLLELLGEWYEKGKVLVFVRSQ------------------------- 653
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
E +I +FK LLIATSVAARGLDV + LV+NF P+H EDYVHR+GRTGRAG
Sbjct 654 ----EKSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAG 709
Query 121 NIGVSYTFITPQEADKAEEL 140
G + TFI+ +A A +L
Sbjct 710 RKGCAVTFISEDDAKYAPDL 729
> sce:YPL119C DBP1, LPH8; Dbp1p (EC:3.6.1.-); K11594 ATP-dependent
RNA helicase [EC:3.6.4.13]
Length=617
Score = 110 bits (276), Expect = 1e-24, Method: Composition-based stats.
Identities = 57/127 (44%), Positives = 80/127 (62%), Gaps = 4/127 (3%)
Query 2 YVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQDQ 61
YV+ MD++ LL + G +IFV + AD+L L+ ++A +HG + Q
Sbjct 392 YVDDMDKKSALLDLLSA----EHKGLTLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQ 447
Query 62 TDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAGN 121
+RE + FK +L+AT+VAARGLD+P+V VIN+ PS I+DYVHRIGRTGRAGN
Sbjct 448 AERERALSAFKANVADILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGN 507
Query 122 IGVSYTF 128
GV+ +F
Sbjct 508 TGVATSF 514
> xla:380261 ddx42, MGC54025; DEAD (Asp-Glu-Ala-Asp) box polypeptide
42 (EC:3.6.4.13); K12835 ATP-dependent RNA helicase DDX42
[EC:3.6.4.13]
Length=947
Score = 110 bits (274), Expect = 2e-24, Method: Composition-based stats.
Identities = 58/141 (41%), Positives = 90/141 (63%), Gaps = 1/141 (0%)
Query 1 QYVEVMDE-ERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQ 59
Q VE++ K+ L + L ++ GS+++FV K+ A+EL A L + + +LHG
Sbjct 470 QVVEILPSGPEKWTWLTRRLVEFTSTGSVLVFVTKKANAEELAANLRQDDHPLGLLHGDM 529
Query 60 DQTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRA 119
DQ++R I +FK + +L+AT VAARGLD+PS+ V+N+ I+ + HRIGRTGRA
Sbjct 530 DQSERNKVISDFKKKSIPVLVATDVAARGLDIPSIKTVVNYDVARDIDTHTHRIGRTGRA 589
Query 120 GNIGVSYTFITPQEADKAEEL 140
G GV+YT +T +E++ A +L
Sbjct 590 GEKGVAYTLLTSKESNFAGDL 610
> mmu:432554 Gm12183, OTTMUSG00000005521; predicted gene 12183;
K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Length=670
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Query 1 QYVEVMDEERKFYRLLQLLGD--WQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGG 58
Q V+V + K +L+ L+ + + I+FV + DEL ++ + G+ A+ +HG
Sbjct 370 QIVDVCHDVEKDEKLILLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGD 429
Query 59 QDQTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGR 118
+ Q +R++ + EFK G ++LIAT VA+RGLDV V VIN+ P+ EDY+HRIGRT R
Sbjct 430 KSQQERDWVLSEFKHGKASILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTAR 489
Query 119 AGNIGVSYTFITPQEADKAEEL 140
+ G +YTF TP +A +L
Sbjct 490 STKTGTAYTFFTPNNIKQASDL 511
> hsa:55510 DDX43, CT13, DKFZp434H2114, HAGE; DEAD (Asp-Glu-Ala-Asp)
box polypeptide 43 (EC:3.6.4.13)
Length=648
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 82/140 (58%), Gaps = 0/140 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q + V EE K+ + L +I+FV+++ AD L ++L+ LHG ++
Sbjct 463 QNIIVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDRE 522
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q DRE ++ FK G +LIAT +A+RGLDV V V NF P +IE+YVHRIGRTGRAG
Sbjct 523 QRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAG 582
Query 121 NIGVSYTFITPQEADKAEEL 140
GVS T +T + A EL
Sbjct 583 RTGVSITTLTRNDWRVASEL 602
> cel:H27M09.1 hypothetical protein; K13116 ATP-dependent RNA
helicase DDX41 [EC:3.6.4.13]
Length=630
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q +E + E K R+L+ L + ++IF K+++ D ++ LL G + +HGG+D
Sbjct 419 QELEFVRSENKLVRVLECL--QKTSPKVLIFAEKKVDVDNIYEYLLVKGVEVASIHGGKD 476
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q+DR I+ F+ K +L+AT VA++GLD + VINF P IE+YVHRIGRTGR+G
Sbjct 477 QSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSG 536
Query 121 NIGVSYTFIT 130
G++ TFI
Sbjct 537 RKGLATTFIN 546
> pfa:PFE0925c snrnp protein, putative; K12858 ATP-dependent RNA
helicase DDX23/PRP28 [EC:3.6.4.13]
Length=1123
Score = 108 bits (270), Expect = 5e-24, Method: Composition-based stats.
Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q +E + E +K +L ++L ++ II+FVN++ AD + + K Y+A+ LHGG+
Sbjct 945 QKLEFLTEGKKKQKLQEILEMYEP--PIIVFVNQKKVADIISKSITKMKYKAVALHGGKA 1002
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q RE T+ FK+ +L+AT VA RG+DV V LVINF P IE Y HRIGRTGRAG
Sbjct 1003 QEIREQTLSAFKNAEFDILVATDVAGRGIDVHGVKLVINFDMPKDIESYTHRIGRTGRAG 1062
Query 121 NIGVSYTFITPQEA 134
G++ +FIT ++
Sbjct 1063 MKGLAISFITEHDS 1076
> cpv:cgd4_3000 Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+HELICc)
; K11594 ATP-dependent RNA helicase [EC:3.6.4.13]
Length=702
Score = 108 bits (270), Expect = 5e-24, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
Query 1 QYVEVMDEERKFYRLLQLLGDWQDYGSIIIFVNKQIEADELFAELLKYGYQALVLHGGQD 60
Q V +E+ K L++LL + Q G ++FV + AD++ L+ + A+ +HG +
Sbjct 436 QRVVYAEEDHKPRLLVKLLLE-QGEGLTVVFVEMKRRADQIEDFLIDQNFPAVSIHGDRS 494
Query 61 QTDREFTIQEFKDGTKTLLIATSVAARGLDVPSVVLVINFCCPSHIEDYVHRIGRTGRAG 120
Q +RE ++ F+ G + +L+AT VAARGLD+P++ VIN P +I+DYVHRIGRTGRAG
Sbjct 495 QQEREHALRLFRSGQRPILVATDVAARGLDIPNITHVINLDMPCNIDDYVHRIGRTGRAG 554
Query 121 NIGVSYTFI 129
N G++ +F+
Sbjct 555 NTGLATSFV 563
Lambda K H
0.321 0.140 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2683748972
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40