bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_2944_orf1
Length=134
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_058240 chromodomain helicase DNA binding protein, p... 221 5e-58
bbo:BBOV_IV009080 23.m05963; chromo-helicase DNA-binding prote... 165 3e-41
tpv:TP01_0866 hypothetical protein; K11367 chromodomain-helica... 164 5e-41
pfa:PF10_0232 Chromodomain-helicase-DNA-binding protein 1 homo... 158 4e-39
cpv:cgd1_3670 CHD3 ortholog with 2x chromodomains plus SNF2 AT... 145 3e-35
ath:AT2G13370 CHR5; CHR5 (chromatin remodeling 5); ATP binding... 107 8e-24
hsa:1105 CHD1, DKFZp686E2337; chromodomain helicase DNA bindin... 105 3e-23
mmu:12648 Chd1, 4930525N21Rik, AI851787, AW555109, MGC141554; ... 105 3e-23
dre:563236 MGC173506, wu:fc26h11, wu:fk85d05; zgc:173506; K113... 104 1e-22
dre:568230 similar to CHD3; K11642 chromodomain-helicase-DNA-b... 103 1e-22
mmu:244059 Chd2, 2810013C04Rik, 2810040A01Rik, 5630401D06Rik, ... 101 8e-22
xla:380196 chd4, MGC52739, b230399n07; chromodomain helicase D... 100 2e-21
dre:560622 fd12d03, wu:fb44b12; wu:fd12d03 99.4 3e-21
hsa:1108 CHD4, DKFZp686E06161, Mi-2b, Mi2-BETA; chromodomain h... 99.0 4e-21
mmu:107932 Chd4, 9530019N15Rik, AA617397, BC005710, D6Ertd380e... 99.0 4e-21
dre:558344 im:7143343; si:ch211-51m24.3; K11643 chromodomain-h... 98.6 5e-21
dre:100330764 chromodomain helicase DNA binding protein 4-like 97.8 7e-21
mmu:216848 Chd3, 2600010P09Rik, AF020312, Chd7, MGC40857, Prp7... 97.4 1e-20
hsa:1107 CHD3, Mi-2a, Mi2-ALPHA, ZFH; chromodomain helicase DN... 97.4 1e-20
ath:AT2G25170 PKL; PKL (PICKLE); ATPase/ DNA binding / DNA hel... 96.7 2e-20
hsa:26038 CHD5, DKFZp434N231, KIAA0444; chromodomain helicase ... 95.5 4e-20
mmu:269610 Chd5, 4930532L22Rik, AW060752, B230399N07Rik; chrom... 95.5 4e-20
cel:H06O01.2 hypothetical protein; K11367 chromodomain-helicas... 90.9 1e-18
cel:T14G8.1 chd-3; CHromoDomain protein family member (chd-3) 87.0 2e-17
cel:F26F12.7 let-418; LEThal family member (let-418); K11643 c... 84.3 9e-17
ath:AT5G18620 CHR17; CHR17 (CHROMATIN REMODELING FACTOR17); AT... 84.0 1e-16
hsa:55636 CHD7, FLJ20357, FLJ20361, IS3, KAL5, KIAA1416; chrom... 83.6 2e-16
mmu:320790 Chd7, A730019I05Rik, Cycn, Cyn, Dz, Edy, Flo, Lda, ... 83.6 2e-16
mmu:67772 Chd8, 5830451P18Rik, AU015341, Duplin, HELSNF1, mKIA... 83.2 2e-16
hsa:57680 CHD8, DKFZp686N17164, HELSNF1, KIAA1564; chromodomai... 83.2 2e-16
sce:YER164W CHD1; Chd1p (EC:3.6.1.-); K11367 chromodomain-heli... 82.8 3e-16
ath:AT3G06400 CHR11; CHR11 (CHROMATIN-REMODELING PROTEIN 11); ... 81.6 6e-16
dre:572355 kismet-like; K14438 chromodomain-helicase-DNA-bindi... 81.6 6e-16
tgo:TGME49_121440 SWI/SNF-related matrix-associated actin-depe... 81.6 6e-16
cel:T04D1.4 tag-192; Temporarily Assigned Gene name family mem... 79.7 2e-15
dre:568214 chd8, fi45h08, si:ch211-10e2.6, wu:fi45h08; chromod... 79.0 4e-15
hsa:80205 CHD9, AD013, CReMM, KISH2, PRIC320; chromodomain hel... 78.6 5e-15
mmu:109151 Chd9, 1810014J18Rik, 9030205D12Rik, A330063D19Rik, ... 78.6 5e-15
dre:570753 chd6; chromodomain helicase DNA binding protein 6; ... 77.4 1e-14
cpv:cgd6_3860 SNF2 helicase 76.6 2e-14
hsa:84181 CHD6, CHD5, KIAA1335, RIGB; chromodomain helicase DN... 75.1 6e-14
mmu:71389 Chd6, 5430439G14Rik, 6330406J24Rik; chromodomain hel... 75.1 6e-14
ath:AT5G44800 CHR4; CHR4 (CHROMATIN REMODELING 4); ATP binding... 72.4 4e-13
ath:AT4G31900 chromatin remodeling factor, putative 72.0 5e-13
mmu:93762 Smarca5, 4933427E24Rik, D030040M08Rik, D330027N15Rik... 71.6 6e-13
hsa:8467 SMARCA5, ISWI, SNF2H, WCRF135, hISWI, hSNF2H; SWI/SNF... 71.6 6e-13
cpv:cgd4_1590 chromodomain-helicase-DNA-binding'multidomain ch... 71.6 7e-13
cpv:cgd8_2770 SNF2L ortholog with a SWI/SNF2 like ATpase and a... 71.2 8e-13
sce:YOR304W ISW2; ATP-dependent DNA translocase involved in ch... 71.2 9e-13
dre:569471 chd7, KIAA0308, fd19h06, si:ch211-197o6.2, wu:cegs2... 70.5 1e-12
> tgo:TGME49_058240 chromodomain helicase DNA binding protein,
putative (EC:2.7.11.1 2.7.7.19); K11367 chromodomain-helicase-DNA-binding
protein 1 [EC:3.6.4.12]
Length=2279
Score = 221 bits (563), Expect = 5e-58, Method: Composition-based stats.
Identities = 106/137 (77%), Positives = 121/137 (88%), Gaps = 3/137 (2%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
LHFLNP+IHR EF+ RY+LVE H+EVGE KTKQLAALQ ELNG+ILRRVKKDVE+SMP
Sbjct 1143 LHFLNPNIHRDCAEFKSRYHLVENHAEVGEQKTKQLAALQTELNGFILRRVKKDVEKSMP 1202
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
KKVESILRVEMSPLQL FY+LILTKN++LLA+KGG NR+SLQNICMELKKVCNHPFLCQ+
Sbjct 1203 KKVESILRVEMSPLQLKFYRLILTKNFDLLAKKGGGNRSSLQNICMELKKVCNHPFLCQS 1262
Query 121 PNT---PEQRNRLLIDG 134
P+ E+ RLL+DG
Sbjct 1263 PDEEEDAEEWRRLLVDG 1279
> bbo:BBOV_IV009080 23.m05963; chromo-helicase DNA-binding protein;
K11367 chromodomain-helicase-DNA-binding protein 1 [EC:3.6.4.12]
Length=1729
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 97/121 (80%), Gaps = 0/121 (0%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
LHF+NP I+ +EEFR RY VE + +GE K KQL +LQQEL+ +LRRVKKDVE+S+P
Sbjct 905 LHFINPQIYPYYEEFRRRYADVENAAAIGENKQKQLLSLQQELHEMVLRRVKKDVEKSLP 964
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
KVE ILRVE+SP+Q+ +Y+ ILT+NY+ LA+ G +R+SLQNICMELKKVCNHPFLC
Sbjct 965 NKVERILRVELSPMQVEWYRNILTRNYDQLAKNSGGSRSSLQNICMELKKVCNHPFLCYE 1024
Query 121 P 121
P
Sbjct 1025 P 1025
> tpv:TP01_0866 hypothetical protein; K11367 chromodomain-helicase-DNA-binding
protein 1 [EC:3.6.4.12]
Length=1816
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 96/121 (79%), Gaps = 0/121 (0%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
LHF+NP I+ +E+FR RY +E + +GE K KQL +LQ EL+ ++LRRVKKDVE+S+P
Sbjct 981 LHFINPQIYPYYEDFRRRYSEIENPAAIGENKQKQLLSLQHELHEFVLRRVKKDVEKSLP 1040
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
KVE ILRVE+SP+Q+ +YK IL +NYE LAR G +R+SLQNICMELKKVCNHPFLC
Sbjct 1041 NKVERILRVELSPMQIDWYKNILARNYEELARNSGGSRSSLQNICMELKKVCNHPFLCYE 1100
Query 121 P 121
P
Sbjct 1101 P 1101
> pfa:PF10_0232 Chromodomain-helicase-DNA-binding protein 1 homolog,
putative; K11367 chromodomain-helicase-DNA-binding protein
1 [EC:3.6.4.12]
Length=3328
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
LHFLNP + +E F+ +Y +E S +GE K KQL LQ EL+ ILRRVKKDVE+S+P
Sbjct 1478 LHFLNPQQYTYYETFQKKYNEIENTSLIGEAKQKQLIQLQHELHEVILRRVKKDVEKSLP 1537
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
KVE ILRVE+SP+Q+ +YK ILTKNYE LA+ G + SLQNICMELKKVCNHPFLC
Sbjct 1538 NKVERILRVELSPIQIEYYKNILTKNYEQLAKASGGAKNSLQNICMELKKVCNHPFLCAE 1597
Query 121 P-NTPEQRNRLL 131
P + E + RL+
Sbjct 1598 PLDKDEYKERLV 1609
> cpv:cgd1_3670 CHD3 ortholog with 2x chromodomains plus SNF2
ATpase (2chromo+helicase+Znf_NFX) ; K11367 chromodomain-helicase-DNA-binding
protein 1 [EC:3.6.4.12]
Length=2055
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 88/121 (72%), Gaps = 0/121 (0%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
LHFLNP ++++EFR RY +E + +G K +QL LQ EL Y+LRRVKKDVE+S+P
Sbjct 730 LHFLNPLRFQNYQEFRLRYPDIENPNVIGPDKQRQLEDLQSELQEYVLRRVKKDVEKSLP 789
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
KVE ILRVE+SP Q YK ILT+NY+ L++ G + SLQNICMELKKVCNHPFL
Sbjct 790 NKVERILRVELSPQQTDMYKSILTRNYDELSKSTGGTKTSLQNICMELKKVCNHPFLIHR 849
Query 121 P 121
P
Sbjct 850 P 850
> ath:AT2G13370 CHR5; CHR5 (chromatin remodeling 5); ATP binding
/ DNA binding / chromatin binding / helicase/ nucleic acid
binding; K11367 chromodomain-helicase-DNA-binding protein
1 [EC:3.6.4.12]
Length=1724
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 78/122 (63%), Gaps = 6/122 (4%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
LHFL+P ++ +EF VE + + +LA L EL +ILRRV KDVE+S+P
Sbjct 803 LHFLDPGKFKNKDEF------VENYKNLSSFNESELANLHLELRPHILRRVIKDVEKSLP 856
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
K+E ILRVEMSPLQ +YK IL +N+ L + N+ SL NI +ELKK CNHPFL ++
Sbjct 857 PKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFES 916
Query 121 PN 122
+
Sbjct 917 AD 918
> hsa:1105 CHD1, DKFZp686E2337; chromodomain helicase DNA binding
protein 1 (EC:3.6.4.12); K11367 chromodomain-helicase-DNA-binding
protein 1 [EC:3.6.4.12]
Length=1710
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 80/129 (62%), Gaps = 9/129 (6%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
LHF+ P S+E+F E G+ + A+L +EL ++LRRVKKDVE+S+P
Sbjct 657 LHFIMPEKFSSWEDFE---------EEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLP 707
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
KVE ILR+EMS LQ +YK ILT+NY+ L++ + + NI MELKK CNH +L +
Sbjct 708 AKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKP 767
Query 121 PNTPEQRNR 129
P+ E N+
Sbjct 768 PDNNEFYNK 776
> mmu:12648 Chd1, 4930525N21Rik, AI851787, AW555109, MGC141554;
chromodomain helicase DNA binding protein 1 (EC:3.6.4.12);
K11367 chromodomain-helicase-DNA-binding protein 1 [EC:3.6.4.12]
Length=1711
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 80/129 (62%), Gaps = 9/129 (6%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
LHF+ P S+E+F E G+ + A+L +EL ++LRRVKKDVE+S+P
Sbjct 655 LHFIMPEKFSSWEDFE---------EEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLP 705
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
KVE ILR+EMS LQ +YK ILT+NY+ L++ + + NI MELKK CNH +L +
Sbjct 706 AKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKP 765
Query 121 PNTPEQRNR 129
P+ E N+
Sbjct 766 PDNNEFYNK 774
> dre:563236 MGC173506, wu:fc26h11, wu:fk85d05; zgc:173506; K11367
chromodomain-helicase-DNA-binding protein 1 [EC:3.6.4.12]
Length=1693
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 78/129 (60%), Gaps = 9/129 (6%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
LHF+ P S+E F E G+ + +L +EL ++LRRVKKDVE+S+P
Sbjct 644 LHFIMPEKFHSWEMF---------EEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLP 694
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
KVE ILRVEMS +Q +YK ILT+NY+ L++ + + NI MELKK CNH +L +
Sbjct 695 AKVEQILRVEMSAVQKQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKP 754
Query 121 PNTPEQRNR 129
P+ E NR
Sbjct 755 PDDNEFYNR 763
> dre:568230 similar to CHD3; K11642 chromodomain-helicase-DNA-binding
protein 3 [EC:3.6.4.12]
Length=2063
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 13/129 (10%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P+ + E F + + K Q+ L L ++LRR+K DV ++MP
Sbjct 941 LNFLTPNRFNNLEGFLEEFADIS--------KEDQIKKLHDLLGPHMLRRLKADVFKNMP 992
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFL--- 117
K E I+RVE+SP+Q +YK ILT+N+E L KGG N+ SL NI M+LKK CNHP+L
Sbjct 993 AKTELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPV 1052
Query 118 --CQAPNTP 124
+AP TP
Sbjct 1053 AAAEAPKTP 1061
> mmu:244059 Chd2, 2810013C04Rik, 2810040A01Rik, 5630401D06Rik,
AI851092, BC029703; chromodomain helicase DNA binding protein
2; K11367 chromodomain-helicase-DNA-binding protein 1 [EC:3.6.4.12]
Length=1827
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 9/126 (7%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
LHF+ P +E+F + G+ + +L + L ++LRRVKKDVE+S+P
Sbjct 660 LHFIMPEKFEFWEDFEEDH---------GKGRENGYQSLHKVLEPFLLRRVKKDVEKSLP 710
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
KVE ILRVEMS LQ +YK ILT+NY+ LA+ + + NI MELKK CNH +L +A
Sbjct 711 AKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKA 770
Query 121 PNTPEQ 126
P E+
Sbjct 771 PEDSER 776
> xla:380196 chd4, MGC52739, b230399n07; chromodomain helicase
DNA binding protein 4; K11643 chromodomain-helicase-DNA-binding
protein 4 [EC:3.6.4.12]
Length=1893
Score = 100 bits (248), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 78/129 (60%), Gaps = 13/129 (10%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P + E F +E +++ K Q+ L L ++LRR+K DV ++MP
Sbjct 907 LNFLTPERFNNLEGF------LEEFADIA--KEDQIKKLHDMLGPHMLRRLKADVFKNMP 958
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFL--- 117
K E I+RVE+SP+Q +YK ILT+N+E L +GG N+ SL N+ M+LKK CNHP+L
Sbjct 959 SKTELIVRVELSPMQKKYYKFILTRNFEALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPV 1018
Query 118 --CQAPNTP 124
+AP P
Sbjct 1019 AAMEAPKMP 1027
> dre:560622 fd12d03, wu:fb44b12; wu:fd12d03
Length=1953
Score = 99.4 bits (246), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 77/129 (59%), Gaps = 13/129 (10%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P + E F +E +++ K Q+ L L ++LRR+K DV + MP
Sbjct 926 LNFLTPERFNNLEGF------LEEFADIA--KEDQIKKLHDMLGPHMLRRLKADVFKHMP 977
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFL--- 117
K E I+RVE+SP+Q +YK ILT+N+E L +GG N+ SL N+ M+LKK CNHP+L
Sbjct 978 SKTELIVRVELSPMQKKYYKYILTRNFEALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPT 1037
Query 118 --CQAPNTP 124
+AP P
Sbjct 1038 AATEAPKMP 1046
> hsa:1108 CHD4, DKFZp686E06161, Mi-2b, Mi2-BETA; chromodomain
helicase DNA binding protein 4 (EC:3.6.4.12); K11643 chromodomain-helicase-DNA-binding
protein 4 [EC:3.6.4.12]
Length=1912
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 78/129 (60%), Gaps = 13/129 (10%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P + E F +E +++ K Q+ L L ++LRR+K DV ++MP
Sbjct 916 LNFLTPERFHNLEGF------LEEFADIA--KEDQIKKLHDMLGPHMLRRLKADVFKNMP 967
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFL--- 117
K E I+RVE+SP+Q +YK ILT+N+E L +GG N+ SL N+ M+LKK CNHP+L
Sbjct 968 SKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPV 1027
Query 118 --CQAPNTP 124
+AP P
Sbjct 1028 AAMEAPKMP 1036
> mmu:107932 Chd4, 9530019N15Rik, AA617397, BC005710, D6Ertd380e,
KIAA4075, MGC11769, Mi-2beta, mKIAA4075; chromodomain helicase
DNA binding protein 4 (EC:3.6.4.12); K11643 chromodomain-helicase-DNA-binding
protein 4 [EC:3.6.4.12]
Length=1915
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 13/129 (10%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P + E F + + K Q+ L L ++LRR+K DV ++MP
Sbjct 909 LNFLTPERFHNLEGFLEEFADI--------AKEDQIKKLHDMLGPHMLRRLKADVFKNMP 960
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFL--- 117
K E I+RVE+SP+Q +YK ILT+N+E L +GG N+ SL N+ M+LKK CNHP+L
Sbjct 961 SKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPV 1020
Query 118 --CQAPNTP 124
+AP P
Sbjct 1021 AAMEAPKMP 1029
> dre:558344 im:7143343; si:ch211-51m24.3; K11643 chromodomain-helicase-DNA-binding
protein 4 [EC:3.6.4.12]
Length=1929
Score = 98.6 bits (244), Expect = 5e-21, Method: Composition-based stats.
Identities = 52/120 (43%), Positives = 74/120 (61%), Gaps = 8/120 (6%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P + E F +E +++ K Q+ L L ++LRR+K DV + MP
Sbjct 901 LNFLTPERFSNLEGF------LEEFADIA--KEDQIKKLHDMLGPHMLRRLKADVFKHMP 952
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
K E I+RVE+SP+Q +YK ILT+N+E L +GG N+ SL N+ M+LKK CNHP+L A
Sbjct 953 SKTELIVRVELSPMQKKYYKFILTRNFEALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPA 1012
> dre:100330764 chromodomain helicase DNA binding protein 4-like
Length=824
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 74/120 (61%), Gaps = 8/120 (6%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P + E F +E +++ K Q+ L L ++LRR+K DV + MP
Sbjct 666 LNFLTPERFSNLEGF------LEEFADIA--KEDQIKKLHDMLGPHMLRRLKADVFKHMP 717
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
K E I+RVE+SP+Q +YK ILT+N+E L +GG N+ SL N+ M+LKK CNHP+L A
Sbjct 718 SKTELIVRVELSPMQKKYYKFILTRNFEALNTRGGGNQVSLLNVVMDLKKCCNHPYLFPA 777
> mmu:216848 Chd3, 2600010P09Rik, AF020312, Chd7, MGC40857, Prp7,
Prp9-1; chromodomain helicase DNA binding protein 3; K11642
chromodomain-helicase-DNA-binding protein 3 [EC:3.6.4.12]
Length=2021
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P + E F + + K Q+ L L ++LRR+K DV ++MP
Sbjct 978 LNFLTPERFNNLEGFLEEFADIS--------KEDQIKKLHDLLGPHMLRRLKADVFKNMP 1029
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFL 117
K E I+RVE+SP+Q +YK ILT+N+E L +GG N+ SL NI M+LKK CNHP+L
Sbjct 1030 AKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYL 1086
> hsa:1107 CHD3, Mi-2a, Mi2-ALPHA, ZFH; chromodomain helicase
DNA binding protein 3 (EC:3.6.4.12); K11642 chromodomain-helicase-DNA-binding
protein 3 [EC:3.6.4.12]
Length=2059
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P + E F + + K Q+ L L ++LRR+K DV ++MP
Sbjct 985 LNFLTPERFNNLEGFLEEFADIS--------KEDQIKKLHDLLGPHMLRRLKADVFKNMP 1036
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFL 117
K E I+RVE+SP+Q +YK ILT+N+E L +GG N+ SL NI M+LKK CNHP+L
Sbjct 1037 AKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYL 1093
> ath:AT2G25170 PKL; PKL (PICKLE); ATPase/ DNA binding / DNA helicase;
K11643 chromodomain-helicase-DNA-binding protein 4
[EC:3.6.4.12]
Length=1384
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 77/120 (64%), Gaps = 9/120 (7%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
+HFL+ S EEF+ + + + +Q++ L + L ++LRRVKKDV + MP
Sbjct 465 MHFLDAGKFGSLEEFQEEFKDINQE--------EQISRLHKMLAPHLLRRVKKDVMKDMP 516
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
K E ILRV++S LQ +YK I T+NY++L +KGG+ + SL NI MEL+KVC HP++ +
Sbjct 517 PKKELILRVDLSSLQKEYYKAIFTRNYQVLTKKGGA-QISLNNIMMELRKVCCHPYMLEG 575
> hsa:26038 CHD5, DKFZp434N231, KIAA0444; chromodomain helicase
DNA binding protein 5 (EC:3.6.4.12); K14435 chromodomain-helicase-DNA-binding
protein 5 [EC:3.6.4.12]
Length=1954
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 73/117 (62%), Gaps = 8/117 (6%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P + E F +E +++ K Q+ L L ++LRR+K DV ++MP
Sbjct 890 LNFLTPERFNNLEGF------LEEFADIS--KEDQIKKLHDLLGPHMLRRLKADVFKNMP 941
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFL 117
K E I+RVE+S +Q +YK ILT+N+E L KGG N+ SL NI M+LKK CNHP+L
Sbjct 942 AKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYL 998
> mmu:269610 Chd5, 4930532L22Rik, AW060752, B230399N07Rik; chromodomain
helicase DNA binding protein 5; K14435 chromodomain-helicase-DNA-binding
protein 5 [EC:3.6.4.12]
Length=1952
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 73/117 (62%), Gaps = 8/117 (6%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P + E F +E +++ K Q+ L L ++LRR+K DV ++MP
Sbjct 892 LNFLTPERFNNLEGF------LEEFADIS--KEDQIKKLHDLLGPHMLRRLKADVFKNMP 943
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFL 117
K E I+RVE+S +Q +YK ILT+N+E L KGG N+ SL NI M+LKK CNHP+L
Sbjct 944 AKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYL 1000
> cel:H06O01.2 hypothetical protein; K11367 chromodomain-helicase-DNA-binding
protein 1 [EC:3.6.4.12]
Length=1461
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 69/119 (57%), Gaps = 9/119 (7%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
LHF+ P +EEF + E K ++AL ++L ++LRRVKKDVE+S+P
Sbjct 581 LHFIMPEKFDCWEEFETAH---------NESNHKGISALHKKLEPFLLRRVKKDVEKSLP 631
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQ 119
K E ILRV+M+ Q FYK ILTKNY L++ + N+ MELKK CNH L +
Sbjct 632 PKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCNHASLTR 690
> cel:T14G8.1 chd-3; CHromoDomain protein family member (chd-3)
Length=1787
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 67/117 (57%), Gaps = 8/117 (6%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P E F + SE+ K Q+ L L ++LRR+K DV MP
Sbjct 806 LNFLAPDRFNQLESFTAEF------SEIS--KEDQIEKLHNLLGPHMLRRLKADVLTGMP 857
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFL 117
K E I+RVE+S +Q +YK ILT+N++ L K G + SL NI MELKK CNHP+L
Sbjct 858 SKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPYL 914
> cel:F26F12.7 let-418; LEThal family member (let-418); K11643
chromodomain-helicase-DNA-binding protein 4 [EC:3.6.4.12]
Length=1829
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query 26 SEVGEI-KTKQLAALQQELNGYILRRVKKDVERSMPKKVESILRVEMSPLQLYFYKLILT 84
+E EI K Q+ L L ++LRR+K DV MP K E I+RVE+S +Q +YK ILT
Sbjct 808 AEFNEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILT 867
Query 85 KNYELLARKGGSNRASLQNICMELKKVCNHPFL 117
+N++ L K G + SL N+ MELKK CNHP+L
Sbjct 868 RNFDALNVKNGGTQMSLMNVLMELKKCCNHPYL 900
> ath:AT5G18620 CHR17; CHR17 (CHROMATIN REMODELING FACTOR17);
ATP binding / DNA binding / DNA-dependent ATPase/ helicase/
hydrolase, acting on acid anhydrides, in phosphorus-containing
anhydrides / nucleic acid binding / nucleosome binding; K11654
SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1069
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 9/126 (7%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P + S E F ++ + ++ E+ + L + L ++LRR+K DVE+ +P
Sbjct 365 LNFLLPEVFSSAETF-DEWFQISGENDQQEV----VQQLHKVLRPFLLRRLKSDVEKGLP 419
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
K E+IL+V MS +Q +YK +L K+ E++ GG R L NI M+L+K CNHP+L Q
Sbjct 420 PKKETILKVGMSQMQKQYYKALLQKDLEVV--NGGGERKRLLNIAMQLRKCCNHPYLFQG 477
Query 121 --PNTP 124
P P
Sbjct 478 AEPGPP 483
> hsa:55636 CHD7, FLJ20357, FLJ20361, IS3, KAL5, KIAA1416; chromodomain
helicase DNA binding protein 7 (EC:3.6.4.12); K14437
chromodomain-helicase-DNA-binding protein 7 [EC:3.6.4.12]
Length=2997
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 73/122 (59%), Gaps = 11/122 (9%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTK-QLAALQQELNGYILRRVKKDVERSM 59
LHFL PS S F E G++KT+ Q+ LQ L +LRR+K+DVE+++
Sbjct 1148 LHFLEPSRFPSETTFMQ---------EFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNL 1198
Query 60 PKKVESILRVEMSPLQLYFYKLILTKNYELLARKGG-SNRASLQNICMELKKVCNHPFLC 118
K E+I+ VE++ +Q +Y+ IL KN+ L++ GG +N +L N MEL+K CNHP+L
Sbjct 1199 APKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLI 1258
Query 119 QA 120
Sbjct 1259 NG 1260
> mmu:320790 Chd7, A730019I05Rik, Cycn, Cyn, Dz, Edy, Flo, Lda,
Mt, Obt, Todo, WBE1, Whi; chromodomain helicase DNA binding
protein 7 (EC:3.6.4.12); K14437 chromodomain-helicase-DNA-binding
protein 7 [EC:3.6.4.12]
Length=2986
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 73/119 (61%), Gaps = 11/119 (9%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTK-QLAALQQELNGYILRRVKKDVERSM 59
LHFL PS S F E G++KT+ Q+ LQ L +LRR+K+DVE+++
Sbjct 1138 LHFLEPSRFPSETTFMQ---------EFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNL 1188
Query 60 PKKVESILRVEMSPLQLYFYKLILTKNYELLARKGG-SNRASLQNICMELKKVCNHPFL 117
K E+I+ VE++ +Q +Y+ IL KN+ L++ GG +N +L N MEL+K CNHP+L
Sbjct 1189 APKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYL 1247
> mmu:67772 Chd8, 5830451P18Rik, AU015341, Duplin, HELSNF1, mKIAA1564;
chromodomain helicase DNA binding protein 8 (EC:3.6.4.12);
K04494 chromodomain helicase DNA binding protein 8 [EC:3.6.4.12]
Length=2582
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 73/119 (61%), Gaps = 11/119 (9%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTK-QLAALQQELNGYILRRVKKDVERSM 59
LHFL PS S EF + G++KT+ Q+ LQ L +LRR+K+DVE+++
Sbjct 993 LHFLEPSQFPSESEFLKDF---------GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNL 1043
Query 60 PKKVESILRVEMSPLQLYFYKLILTKNYELLARKGG-SNRASLQNICMELKKVCNHPFL 117
K E+I+ VE++ +Q +Y+ IL KN+ L++ G +N +L N MEL+K CNHP+L
Sbjct 1044 APKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYL 1102
> hsa:57680 CHD8, DKFZp686N17164, HELSNF1, KIAA1564; chromodomain
helicase DNA binding protein 8 (EC:3.6.4.12); K04494 chromodomain
helicase DNA binding protein 8 [EC:3.6.4.12]
Length=2581
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 73/119 (61%), Gaps = 11/119 (9%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTK-QLAALQQELNGYILRRVKKDVERSM 59
LHFL PS S EF + G++KT+ Q+ LQ L +LRR+K+DVE+++
Sbjct 991 LHFLEPSQFPSESEFLKDF---------GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNL 1041
Query 60 PKKVESILRVEMSPLQLYFYKLILTKNYELLARKGG-SNRASLQNICMELKKVCNHPFL 117
K E+I+ VE++ +Q +Y+ IL KN+ L++ G +N +L N MEL+K CNHP+L
Sbjct 1042 APKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYL 1100
> sce:YER164W CHD1; Chd1p (EC:3.6.1.-); K11367 chromodomain-helicase-DNA-binding
protein 1 [EC:3.6.4.12]
Length=1468
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 52/79 (65%), Gaps = 0/79 (0%)
Query 39 LQQELNGYILRRVKKDVERSMPKKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNR 98
L + + +ILRR+KKDVE+S+P K E ILRVE+S +Q +YK ILTKNY L
Sbjct 586 LHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGH 645
Query 99 ASLQNICMELKKVCNHPFL 117
SL NI ELKK NHP+L
Sbjct 646 FSLLNIMNELKKASNHPYL 664
> ath:AT3G06400 CHR11; CHR11 (CHROMATIN-REMODELING PROTEIN 11);
ATP binding / DNA binding / DNA-dependent ATPase/ helicase/
hydrolase, acting on acid anhydrides, in phosphorus-containing
anhydrides / nucleic acid binding / nucleosome binding;
K11654 SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1055
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P I S E F ++ + ++ E+ + L + L ++LRR+K DVE+ +P
Sbjct 360 LNFLLPEIFSSAETF-DEWFQISGENDQQEV----VQQLHKVLRPFLLRRLKSDVEKGLP 414
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
K E+IL+V MS +Q +YK +L K+ E A G R L NI M+L+K CNHP+L Q
Sbjct 415 PKKETILKVGMSQMQKQYYKALLQKDLE--AVNAGGERKRLLNIAMQLRKCCNHPYLFQG 472
Query 121 --PNTP 124
P P
Sbjct 473 AEPGPP 478
> dre:572355 kismet-like; K14438 chromodomain-helicase-DNA-binding
protein 9 [EC:3.6.4.12]
Length=2429
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 11/122 (9%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTK-QLAALQQELNGYILRRVKKDVERSM 59
LHFL P+ S F E G++KT+ Q+ LQ L +LRR+K+DVE+ +
Sbjct 639 LHFLEPTRFPSENTFMQ---------EFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKL 689
Query 60 PKKVESILRVEMSPLQLYFYKLILTKNYELLARKGG-SNRASLQNICMELKKVCNHPFLC 118
K E+I+ VE++ +Q +Y+ IL KN+ LA+ G +N +L N MEL+K CNHP+L
Sbjct 690 APKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANVPNLLNTMMELRKCCNHPYLI 749
Query 119 QA 120
+
Sbjct 750 KG 751
> tgo:TGME49_121440 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin, putative (EC:2.7.11.1)
Length=1249
Score = 81.6 bits (200), Expect = 6e-16, Method: Composition-based stats.
Identities = 51/125 (40%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query 1 LHFLNPSIHRSFEEFRHRYYLV---ERHSEVG-----EIKTKQLAALQQELNGYILRRVK 52
L+FL PS+ S EF H + L E SE+ E K + L + L ++LRRVK
Sbjct 491 LNFLFPSLFSSSAEFEHLFDLTGTGEAGSEMTAEEREERNMKIVTRLHRILRPFMLRRVK 550
Query 53 KDVERSMPKKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVC 112
K+V + MP K E +L V +S +Q YK +LTKN L G+ R L N+ M+L+K C
Sbjct 551 KEVLKEMPPKKELLLVVPLSAMQKQLYKDLLTKNVAALQGAEGAGRTQLLNLAMQLRKAC 610
Query 113 NHPFL 117
NHP+L
Sbjct 611 NHPYL 615
> cel:T04D1.4 tag-192; Temporarily Assigned Gene name family member
(tag-192); K14437 chromodomain-helicase-DNA-binding protein
7 [EC:3.6.4.12]
Length=2967
Score = 79.7 bits (195), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/118 (38%), Positives = 74/118 (62%), Gaps = 12/118 (10%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTK-QLAALQQELNGYILRRVKKDVERSM 59
L+FL+P ++F + +E + G +T Q+ LQ+ L +LRR+K+DVE+S+
Sbjct 1381 LNFLHP------QQFDNSATFLE---QFGSCQTDDQVQKLQEILKPMMLRRLKEDVEKSL 1431
Query 60 PKKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFL 117
K E+I+ V++S +Q FY+ IL +N+ L + G++ SL N+ MEL+K CNHPFL
Sbjct 1432 GPKEETIIEVQLSDMQKKFYRAILERNFSHLCK--GTSAPSLMNVMMELRKCCNHPFL 1487
> dre:568214 chd8, fi45h08, si:ch211-10e2.6, wu:fi45h08; chromodomain
helicase DNA binding protein 8 (EC:3.6.4.12); K04494
chromodomain helicase DNA binding protein 8 [EC:3.6.4.12]
Length=2549
Score = 79.0 bits (193), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/120 (39%), Positives = 71/120 (59%), Gaps = 12/120 (10%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTK-QLAALQQELNGYILRRVKKDVERSM 59
LHFL P+ S EF E G++KT+ Q+ LQ L +LRR+K+DVE+++
Sbjct 1065 LHFLEPAQFPSEIEFLR---------EFGDLKTEEQVQKLQSILKPMMLRRLKEDVEKNL 1115
Query 60 PKKVESILRVEMSPLQLYFYKLILTKNYELLARKG--GSNRASLQNICMELKKVCNHPFL 117
K E+I+ VE++ +Q +Y+ IL +N+ L+ SN +L N MEL+K CNHP+L
Sbjct 1116 APKQETIIEVELTDVQKKYYRAILERNFSFLSMGATQNSNVPNLLNTMMELRKCCNHPYL 1175
> hsa:80205 CHD9, AD013, CReMM, KISH2, PRIC320; chromodomain helicase
DNA binding protein 9 (EC:3.6.4.12); K14438 chromodomain-helicase-DNA-binding
protein 9 [EC:3.6.4.12]
Length=2881
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 11/122 (9%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTK-QLAALQQELNGYILRRVKKDVERSM 59
LHFL P S F E G++KT+ Q+ LQ L +LRR+K+DVE+ +
Sbjct 1040 LHFLEPLRFPSESTFMQ---------EFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKL 1090
Query 60 PKKVESILRVEMSPLQLYFYKLILTKNYELLARKGG-SNRASLQNICMELKKVCNHPFLC 118
K E+I+ VE++ +Q +Y+ IL KN+ L++ G +N +L N MEL+K CNHP+L
Sbjct 1091 APKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLI 1150
Query 119 QA 120
+
Sbjct 1151 KG 1152
> mmu:109151 Chd9, 1810014J18Rik, 9030205D12Rik, A330063D19Rik,
AD013, PRIC320, mKIAA0308; chromodomain helicase DNA binding
protein 9 (EC:3.6.4.12); K14438 chromodomain-helicase-DNA-binding
protein 9 [EC:3.6.4.12]
Length=2869
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 11/122 (9%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTK-QLAALQQELNGYILRRVKKDVERSM 59
LHFL P S F E G++KT+ Q+ LQ L +LRR+K+DVE+ +
Sbjct 1039 LHFLEPLRFPSESTFMQ---------EFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKL 1089
Query 60 PKKVESILRVEMSPLQLYFYKLILTKNYELLARKGG-SNRASLQNICMELKKVCNHPFLC 118
K E+I+ VE++ +Q +Y+ IL KN+ L++ G +N +L N MEL+K CNHP+L
Sbjct 1090 APKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLI 1149
Query 119 QA 120
+
Sbjct 1150 KG 1151
> dre:570753 chd6; chromodomain helicase DNA binding protein 6;
K14436 chromodomain-helicase-DNA-binding protein 6 [EC:3.6.4.12]
Length=2699
Score = 77.4 bits (189), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 11/119 (9%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTK-QLAALQQELNGYILRRVKKDVERSM 59
L+FL PS +F +E E G++KT+ Q+ LQ L +LRR+K DVE+++
Sbjct 427 LNFLEPS------QFPSETTFLE---EFGDLKTEEQVKKLQAILKPMMLRRLKDDVEKNL 477
Query 60 PKKVESILRVEMSPLQLYFYKLILTKNYELLARKGGS-NRASLQNICMELKKVCNHPFL 117
K E+I+ VE++ +Q +Y+ IL KN+ LA+ N +L N MEL+K CNHP+L
Sbjct 478 APKEETIIEVELTNIQKKYYRAILEKNFAFLAKGANQHNMPNLINTMMELRKCCNHPYL 536
> cpv:cgd6_3860 SNF2 helicase
Length=1102
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P I S EEF + ++ GE + +A + L ++LRRVK +VE +P
Sbjct 364 LNFLYPEIFSSSEEFEALF-----EAQTGEEEQSIIARFHRILRPFMLRRVKSEVEIDIP 418
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
K E +L V ++ +Q YK +L+KN + L K G + L N+ M+L+K CNHP+L
Sbjct 419 PKKEILLYVPLTNMQRRLYKDLLSKNVDALQEKEGGGKLRLINLAMQLRKACNHPYLFDG 478
> hsa:84181 CHD6, CHD5, KIAA1335, RIGB; chromodomain helicase
DNA binding protein 6 (EC:3.6.4.12); K14436 chromodomain-helicase-DNA-binding
protein 6 [EC:3.6.4.12]
Length=2715
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 11/119 (9%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTK-QLAALQQELNGYILRRVKKDVERSM 59
L+FL PS +F +E E G++KT+ Q+ LQ L +LRR+K DVE+++
Sbjct 641 LNFLEPS------QFPSETAFLE---EFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNL 691
Query 60 PKKVESILRVEMSPLQLYFYKLILTKNYELLARKGGS-NRASLQNICMELKKVCNHPFL 117
K E+I+ VE++ +Q +Y+ IL KN+ L + N +L N MEL+K CNHP+L
Sbjct 692 APKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYL 750
> mmu:71389 Chd6, 5430439G14Rik, 6330406J24Rik; chromodomain helicase
DNA binding protein 6; K14436 chromodomain-helicase-DNA-binding
protein 6 [EC:3.6.4.12]
Length=2711
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 11/119 (9%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTK-QLAALQQELNGYILRRVKKDVERSM 59
L+FL PS +F +E E G++KT+ Q+ LQ L +LRR+K DVE+++
Sbjct 640 LNFLEPS------QFPSETAFLE---EFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNL 690
Query 60 PKKVESILRVEMSPLQLYFYKLILTKNYELLARKGGS-NRASLQNICMELKKVCNHPFL 117
K E+I+ VE++ +Q +Y+ IL KN+ L + N +L N MEL+K CNHP+L
Sbjct 691 APKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYL 749
> ath:AT5G44800 CHR4; CHR4 (CHROMATIN REMODELING 4); ATP binding
/ DNA binding / chromatin binding / helicase/ nucleic acid
binding / protein binding / zinc ion binding
Length=2242
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query 46 YILRRVKKDVERSMPKKVESILRVEMSPLQLYFYKLILTKNYELLARKG-GSNRASLQNI 104
++LRR+KKD +++P K E ++ VE++ +Q +Y+ +LTKNY++L G G + S+ NI
Sbjct 909 HMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNI 968
Query 105 CMELKKVCNHPFL 117
M+L+KVCNHP+L
Sbjct 969 VMQLRKVCNHPYL 981
> ath:AT4G31900 chromatin remodeling factor, putative
Length=1202
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 16/118 (13%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDV-ERSM 59
+HFL+ S E+F+ K +Q++ L Q L ++LRR+KKDV + +
Sbjct 399 MHFLDADKFGSLEKFQDIN------------KEEQISRLHQMLAPHLLRRLKKDVLKDKV 446
Query 60 PKKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFL 117
P K E ILRV+MS Q YK ++T NY++L +K A + N+ M+L++VC+HP+L
Sbjct 447 PPKKELILRVDMSSQQKEVYKAVITNNYQVLTKK---RDAKISNVLMKLRQVCSHPYL 501
> mmu:93762 Smarca5, 4933427E24Rik, D030040M08Rik, D330027N15Rik,
MommeD4, Snf2h; SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5; K11654
SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 5 [EC:3.6.4.-]
Length=1051
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P + S ++F + + ++ +G+ K + L L ++LRR+K DVE+S+P
Sbjct 350 LNFLLPDVFNSADDFDSWF---DTNNCLGD--QKLVERLHMVLRPFLLRRIKADVEKSLP 404
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
K E + V +S +Q +Y IL K+ ++L G ++ L NI M+L+K CNHP+L
Sbjct 405 PKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDG 464
Query 121 --PNTP 124
P P
Sbjct 465 AEPGPP 470
> hsa:8467 SMARCA5, ISWI, SNF2H, WCRF135, hISWI, hSNF2H; SWI/SNF
related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5; K11654 SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily
A member 5 [EC:3.6.4.-]
Length=1052
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTKQLAALQQELNGYILRRVKKDVERSMP 60
L+FL P + S ++F + + ++ +G+ K + L L ++LRR+K DVE+S+P
Sbjct 351 LNFLLPDVFNSADDFDSWF---DTNNCLGD--QKLVERLHMVLRPFLLRRIKADVEKSLP 405
Query 61 KKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFLCQA 120
K E + V +S +Q +Y IL K+ ++L G ++ L NI M+L+K CNHP+L
Sbjct 406 PKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDG 465
Query 121 --PNTP 124
P P
Sbjct 466 AEPGPP 471
> cpv:cgd4_1590 chromodomain-helicase-DNA-binding'multidomain
chromatin protein with the following architecture: chromo-bromo-chromo-SNF2
ATpase' ; K14437 chromodomain-helicase-DNA-binding
protein 7 [EC:3.6.4.12]
Length=2270
Score = 71.6 bits (174), Expect = 7e-13, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 33/154 (21%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTK-QLAALQQELNGYILRRVKKDVERSM 59
L+++ P S E F E GE++T Q++AL + L ++LRRVK+DV + +
Sbjct 1553 LNYIEPIKFASIEAFTQ---------EFGELQTSGQVSALHELLRPHLLRRVKEDVMKEI 1603
Query 60 PKKVESILRVEMSPLQLYFYKLI-------LTKNYELLARKGGSNR--ASLQNICMELKK 110
P E+I+ VE++ Q +Y+ I L KN L ++ GSN SL N+ +EL+K
Sbjct 1604 PPLEETIIDVELTTAQKAYYRAIFERNRAFLCKNVGLGGKRSGSNAPIPSLMNVEVELRK 1663
Query 111 VCNHPF-----------LCQAPNTPEQRNRLLID 133
CNHPF LC+ T E+R + +I+
Sbjct 1664 CCNHPFQVVGVEEREVALCK---TSEERYKKMIE 1694
> cpv:cgd8_2770 SNF2L ortholog with a SWI/SNF2 like ATpase and
a Myb domain ; K01509 adenosinetriphosphatase [EC:3.6.1.3]
Length=1308
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGE---IKTKQLAALQQELNGYILRRVKKDVER 57
L+FL P++ S E+F + + S+ + IKT L Q L ++LRR+K DVER
Sbjct 381 LNFLMPNLFSSSEDFESLFDFSKLESDDQQKCVIKT-----LHQILRPFMLRRLKADVER 435
Query 58 SMPKKVESILRVEMSPLQLYFYKLILTKNYELLARKGGSNRASLQNICMELKKVCNHPFL 117
+P K E + + +S LQ Y +LT+N ++L SN+ + N+ M+L+K CNHP+L
Sbjct 436 DLPPKRELYVYIGLSKLQKKIYSELLTRNLDVL-NSASSNKTQMLNLLMQLRKTCNHPYL 494
Query 118 CQA--PNTP 124
P P
Sbjct 495 FDGVEPGPP 503
> sce:YOR304W ISW2; ATP-dependent DNA translocase involved in
chromatin remodeling; ATPase component that, with Itc1p, forms
a complex required for repression of A-specific genes, INO1,
and early meiotic genes during mitotic growth (EC:3.6.1.-)
Length=1120
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 10/137 (7%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVG-EIKTKQLAALQQELNGYILRRVKKDVERSM 59
L+FL P I E F + + +SE EI +QL ++ LN ++LRRVK DVE+S+
Sbjct 355 LNFLLPDIFGDSELFDE--WFEQNNSEQDQEIVIQQLHSV---LNPFLLRRVKADVEKSL 409
Query 60 PKKVESILRVEMSPLQLYFYKLILTKNYELLARKGG--SNRASLQNICMELKKVCNHPFL 117
K+E+ + V M+ +Q+ +YK +L K+ + + G + L NI M+L+K CNHP+L
Sbjct 410 LPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYL 469
Query 118 CQA--PNTPEQRNRLLI 132
+ P P + LI
Sbjct 470 FEGAEPGPPYTTDEHLI 486
> dre:569471 chd7, KIAA0308, fd19h06, si:ch211-197o6.2, wu:cegs2051,
wu:fb37f10, wu:fb39h04, wu:fd19h06; chromodomain helicase
DNA binding protein 7; K14437 chromodomain-helicase-DNA-binding
protein 7 [EC:3.6.4.12]
Length=3094
Score = 70.5 bits (171), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 19/127 (14%)
Query 1 LHFLNPSIHRSFEEFRHRYYLVERHSEVGEIKTK-QLAALQQELNGYILRRVKKDVERSM 59
L+FL P S F E G++KT+ Q+ LQ L +LRR+K+DVE+++
Sbjct 1192 LNFLEPDRFPSESTFMQ---------EFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNL 1242
Query 60 PKKVESILRVEMSPLQLYFYKLILTKNYELLAR---------KGGSNRASLQNICMELKK 110
K E+I+ VE++ +Q +Y+ IL KN+ L++ GGSN +L N MEL+K
Sbjct 1243 APKEETIIEVELTNVQKKYYRAILEKNFAFLSKSGAGGGSGGGGGSNVPNLLNTMMELRK 1302
Query 111 VCNHPFL 117
CNHP+L
Sbjct 1303 CCNHPYL 1309
Lambda K H
0.322 0.138 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2231140792
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40