bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_2990_orf1
Length=163
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_113100 signal recognition particle 54 kda protein, ... 256 2e-68
tpv:TP01_0852 signal recognition particle 54 kDa protein; K031... 255 4e-68
pfa:PF14_0477 signal recognition particle SRP54, putative; K03... 252 3e-67
cpv:cgd7_1640 SRP54. signal recognition 54. GTpase. ; K03106 s... 238 5e-63
ath:AT1G48900 signal recognition particle 54 kDa protein 3 / S... 230 2e-60
ath:AT5G49500 signal recognition particle 54 kDa protein 2 / S... 225 6e-59
bbo:BBOV_IV009210 23.m06227; signal recognition particle SRP54... 219 5e-57
xla:380256 srp54, MGC53033; signal recognition particle 54kDa;... 216 4e-56
dre:393963 srp54, MGC55842, Srp54k, zgc:55842, zgc:85713; sign... 216 4e-56
hsa:6729 SRP54; signal recognition particle 54kDa; K03106 sign... 215 4e-56
mmu:665155 Srp54b; signal recognition particle 54B; K03106 sig... 215 5e-56
mmu:24067 Srp54a, 54kDa, Srp54; signal recognition particle 54... 215 5e-56
cel:F21D5.7 hypothetical protein; K03106 signal recognition pa... 214 9e-56
mmu:100101806 Srp54c, E330029E12Rik, MGC6231; signal recogniti... 214 1e-55
ath:AT1G15310 ATHSRP54A (ARABIDOPSIS THALIANA SIGNAL RECOGNITI... 212 4e-55
sce:YPR088C SRP54, SRH1; Signal recognition particle (SRP) sub... 176 4e-44
hsa:650638 signal recognition particle 54 kDa protein-like 169 3e-42
ath:AT5G03940 CPSRP54 (CHLOROPLAST SIGNAL RECOGNITION PARTICLE... 112 4e-25
eco:b2610 ffh, ECK2607, JW5414; signal recognition particle (S... 112 7e-25
ath:AT2G45770 CPFTSY; CPFTSY; 7S RNA binding / GTP binding / n... 74.7 1e-13
eco:b3464 ftsY, ECK3448, JW3429; signal recognition particle (... 72.4 6e-13
tpv:TP02_0423 signal recognition particle receptor subunit alp... 55.1 9e-08
dre:569063 srpr, id:ibd1064, wu:fd12f02; signal recognition pa... 52.0 9e-07
pfa:PF13_0350 signal recognition particle receptor alpha subun... 52.0 9e-07
ath:AT4G30600 signal recognition particle receptor alpha subun... 51.6 1e-06
cel:F38A1.8 hypothetical protein; K13431 signal recognition pa... 50.1 4e-06
cpv:cgd8_5260 Srp101p GTpase. signal recognition particle rece... 49.3 5e-06
tgo:TGME49_080610 signal recognition particle protein, putativ... 49.3 6e-06
hsa:6734 SRPR, DP, MGC17355, MGC3650, MGC9571, Sralpha; signal... 49.3 6e-06
mmu:67398 Srpr, 1300011P19Rik, D11Mgi27; signal recognition pa... 48.9 7e-06
sce:YDR292C SRP101; Signal recognition particle (SRP) receptor... 47.8 2e-05
bbo:BBOV_III005280 17.m07472; SRP54-type protein, GTPase domai... 42.4 6e-04
cel:B0285.4 hypothetical protein 30.4 2.7
cel:F57C12.5 mrp-1; Multidrug Resistance Protein family member... 29.6 4.1
xla:495380 hypothetical LOC495380 29.6 4.6
eco:b0830 gsiB, ECK0820, JW5111, yliB; glutathione periplasmic... 29.6 4.7
xla:399014 tagln, MGC68550; transgelin 29.3 5.9
xla:496107 ppara, PPARalpha, nr1c1, xPPARalpha, xppara; peroxi... 28.9 7.5
> tgo:TGME49_113100 signal recognition particle 54 kda protein,
putative (EC:2.7.1.25); K03106 signal recognition particle
subunit SRP54
Length=582
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/163 (79%), Positives = 156/163 (95%), Gaps = 0/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH+QEAALF+EM+QVA+AV+PDD+VFV+DSHIGQAC+DQA AF+ SV VGSVI+TKLD
Sbjct 264 SGRHKQEAALFDEMKQVAEAVDPDDVVFVMDSHIGQACFDQAQAFSDSVDVGSVIVTKLD 323
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G+AKGGGALSAVAATGAPIIFLGSGEHFDDF+ F+ANSFVSRLLGLGD+GGL +TLKE++
Sbjct 324 GHAKGGGALSAVAATGAPIIFLGSGEHFDDFEAFEANSFVSRLLGLGDVGGLFSTLKEMV 383
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
S EKQQE+++R+SKG+FTL+DM +QF+NVLKMGPISKV+SM+P
Sbjct 384 SVEKQQELMDRLSKGRFTLEDMGEQFRNVLKMGPISKVISMVP 426
> tpv:TP01_0852 signal recognition particle 54 kDa protein; K03106
signal recognition particle subunit SRP54
Length=495
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 114/163 (69%), Positives = 144/163 (88%), Gaps = 0/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH+QE ALF+EM+ + DAV PD++VFV+DSHIGQACYDQAAAF +V VGSVIITKLD
Sbjct 192 SGRHKQEDALFDEMKLIYDAVQPDEVVFVMDSHIGQACYDQAAAFNKAVDVGSVIITKLD 251
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G+AKGGGALSAV+AT +PIIF+G+GEHFDDF+PFD SF+SRLLG GD+ GL+NTLK+VI
Sbjct 252 GHAKGGGALSAVSATNSPIIFIGTGEHFDDFEPFDPKSFISRLLGFGDINGLINTLKDVI 311
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
+ + + ++++RI+ KFT++DMYDQFQN+LKM PI KVMSM+P
Sbjct 312 NLDDKPDLLDRIASAKFTIRDMYDQFQNLLKMAPIGKVMSMLP 354
> pfa:PF14_0477 signal recognition particle SRP54, putative; K03106
signal recognition particle subunit SRP54
Length=500
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 114/163 (69%), Positives = 142/163 (87%), Gaps = 0/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH+QE LFEEM QV +++ P++I+FV+DSHIGQ+C+DQA AF SVS+GS+IITK+D
Sbjct 192 SGRHKQENELFEEMIQVENSIQPEEIIFVIDSHIGQSCHDQAMAFKNSVSLGSIIITKID 251
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G+AKGGGALSAVAATG PI F+G+GEH +DF+ F+A SFVSRLLGLGD+ GLV+T+KEVI
Sbjct 252 GHAKGGGALSAVAATGCPITFIGTGEHVNDFEKFEAKSFVSRLLGLGDISGLVSTIKEVI 311
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
+KQ E++ R+SKGKF L+DMYDQFQNV KMG +SKVMSMIP
Sbjct 312 DIDKQPELMNRLSKGKFVLRDMYDQFQNVFKMGSLSKVMSMIP 354
> cpv:cgd7_1640 SRP54. signal recognition 54. GTpase. ; K03106
signal recognition particle subunit SRP54
Length=515
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 109/163 (66%), Positives = 137/163 (84%), Gaps = 0/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH+QE++LF EM+QV NPDD+VFV+DSHIGQACYDQA AF +V VGSVIITKLD
Sbjct 207 SGRHKQESSLFVEMEQVVMETNPDDVVFVMDSHIGQACYDQAMAFCNAVDVGSVIITKLD 266
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G+AKGGGALSAVAATGAPIIF+G+GEHFD+F+PF+ FVSRLLGLGD+ GL+ + EV+
Sbjct 267 GHAKGGGALSAVAATGAPIIFIGTGEHFDEFEPFETKGFVSRLLGLGDISGLMAKINEVV 326
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
++Q +M+ R+ +G FTL+DMY+QFQN+L MG S ++SMIP
Sbjct 327 PLDRQPDMVNRLVQGIFTLRDMYEQFQNMLNMGSPSALLSMIP 369
> ath:AT1G48900 signal recognition particle 54 kDa protein 3 /
SRP54 (SRP-54C); K03106 signal recognition particle subunit
SRP54
Length=431
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 103/163 (63%), Positives = 137/163 (84%), Gaps = 0/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH+QEA+LFEEM+QVA+A PD ++FV+DS IGQA +DQA AF SV+VG+VIITK+D
Sbjct 192 SGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMD 251
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G+AKGGGALSAVAAT +P+IF+G+GEH D+F+ FD FVSRLLG+GD G V+ L+EV+
Sbjct 252 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVV 311
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
++Q E++E++S+G FTL+ MYDQFQN+L MGP+ +V SM+P
Sbjct 312 PKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLP 354
> ath:AT5G49500 signal recognition particle 54 kDa protein 2 /
SRP54 (SRP-54B); K03106 signal recognition particle subunit
SRP54
Length=497
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 100/163 (61%), Positives = 135/163 (82%), Gaps = 0/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH+Q+A+LFEEM+Q+++A PD ++FV+DS IGQ ++QA AF +V+VG+VIITK+D
Sbjct 194 SGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQTVAVGAVIITKMD 253
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G+AKGGG LSAVAAT +P+IF+G+GEH D+F+ FDA FVSRLLG GDM G VN L+EV+
Sbjct 254 GHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGNGDMSGFVNKLQEVV 313
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
++Q E++E +S GKFTL+ MYDQFQN+L MGP+ +V SM+P
Sbjct 314 PKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKEVFSMLP 356
> bbo:BBOV_IV009210 23.m06227; signal recognition particle SRP54
protein; K03106 signal recognition particle subunit SRP54
Length=499
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 141/163 (86%), Gaps = 0/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH+QE +LFEEM+ + +AV PDD++FV+DSHIGQACYDQAAAF V VGSVIITKLD
Sbjct 192 SGRHKQEESLFEEMRLIHEAVKPDDVIFVMDSHIGQACYDQAAAFNKVVDVGSVIITKLD 251
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G+AKGGGAL+AVAAT +PIIF+G+GEHFD+F+ FDA SFVSR+LG+GD+ GL+NT++E++
Sbjct 252 GHAKGGGALAAVAATNSPIIFIGTGEHFDNFEKFDAKSFVSRMLGMGDINGLINTIQEIV 311
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
+EM++RIS G +TL+DMY+Q N+LKMGP+S+V+SM P
Sbjct 312 GMNTNKEMVDRISSGIYTLRDMYEQITNILKMGPLSQVVSMFP 354
> xla:380256 srp54, MGC53033; signal recognition particle 54kDa;
K03106 signal recognition particle subunit SRP54
Length=504
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 97/163 (59%), Positives = 133/163 (81%), Gaps = 1/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH+QE +LFEEM QV++AV PD+IV+V+D+ IGQAC QA AF V V SVI+TKLD
Sbjct 192 SGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLD 251
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G+AKGGGALSAVAAT +PIIF+G+GEH DDF+PF F+S+LLG+GD+ GL++ + E +
Sbjct 252 GHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-L 310
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
+ + + MI+++ G+FTL+DMY+QFQN++KMGP S+++ MIP
Sbjct 311 NLDDNEAMIDKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIP 353
> dre:393963 srp54, MGC55842, Srp54k, zgc:55842, zgc:85713; signal
recognition particle 54; K03106 signal recognition particle
subunit SRP54
Length=504
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 97/163 (59%), Positives = 132/163 (80%), Gaps = 1/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH+QE +LFEEM QV++AV PD+IV+V+D+ IGQAC QA AF V V SVI+TKLD
Sbjct 192 SGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLD 251
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G+AKGGGALSAVAAT +PIIF+G+GEH DDF+PF F+S+LLG+GD+ GL++ + E +
Sbjct 252 GHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-L 310
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
+ +E+I+++ G+FTL+DMY+QFQN++KMGP ++M MIP
Sbjct 311 KLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIP 353
> hsa:6729 SRP54; signal recognition particle 54kDa; K03106 signal
recognition particle subunit SRP54
Length=455
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 97/163 (59%), Positives = 132/163 (80%), Gaps = 1/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH+QE +LFEEM QVA+A+ PD+IV+V+D+ IGQAC QA AF V V SVI+TKLD
Sbjct 143 SGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLD 202
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G+AKGGGALSAVAAT +PIIF+G+GEH DDF+PF F+S+LLG+GD+ GL++ + E +
Sbjct 203 GHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-L 261
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
+ + +IE++ G+FTL+DMY+QFQN++KMGP S+++ MIP
Sbjct 262 KLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIP 304
> mmu:665155 Srp54b; signal recognition particle 54B; K03106 signal
recognition particle subunit SRP54
Length=504
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 96/163 (58%), Positives = 132/163 (80%), Gaps = 1/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH+QE +LFEEM QV++A+ PD+IV+V+D+ IGQAC QA AF V V SVI+TKLD
Sbjct 192 SGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLD 251
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G+AKGGGALSAVAAT +PIIF+G+GEH DDF+PF F+S+LLG+GD+ GL++ + E +
Sbjct 252 GHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-L 310
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
+ + +IE++ G+FTL+DMY+QFQN++KMGP S+++ MIP
Sbjct 311 KLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIP 353
> mmu:24067 Srp54a, 54kDa, Srp54; signal recognition particle
54A; K03106 signal recognition particle subunit SRP54
Length=504
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 96/163 (58%), Positives = 132/163 (80%), Gaps = 1/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH+QE +LFEEM QV++A+ PD+IV+V+D+ IGQAC QA AF V V SVI+TKLD
Sbjct 192 SGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLD 251
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G+AKGGGALSAVAAT +PIIF+G+GEH DDF+PF F+S+LLG+GD+ GL++ + E +
Sbjct 252 GHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-L 310
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
+ + +IE++ G+FTL+DMY+QFQN++KMGP S+++ MIP
Sbjct 311 KLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIP 353
> cel:F21D5.7 hypothetical protein; K03106 signal recognition
particle subunit SRP54
Length=496
Score = 214 bits (545), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 98/163 (60%), Positives = 133/163 (81%), Gaps = 1/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH+QEA+LFEEM QV++AV PD++VFV+D+ IGQAC QA AF+ +V V SVIITKLD
Sbjct 192 SGRHKQEASLFEEMLQVSNAVTPDNVVFVMDASIGQACEAQARAFSQTVDVASVIITKLD 251
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
+AKGGGALSAVA T +P+IF+G+GEH DDF+ F SFV +LLG+GD+ GLV+ + + I
Sbjct 252 SHAKGGGALSAVAVTKSPVIFIGTGEHIDDFEIFKPKSFVQKLLGMGDIAGLVDMVND-I 310
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
+ +E++ R+ +G+FTL+DMY+QFQN++KMGP S++M MIP
Sbjct 311 GIQDNKELVGRLKQGQFTLRDMYEQFQNIMKMGPFSQIMGMIP 353
> mmu:100101806 Srp54c, E330029E12Rik, MGC6231; signal recognition
particle 54C; K03106 signal recognition particle subunit
SRP54
Length=504
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 96/163 (58%), Positives = 131/163 (80%), Gaps = 1/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH+QE +LFEEM QV++A+ PD+IV+V+D+ IGQAC QA AF V V SVI+TKLD
Sbjct 192 SGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLD 251
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G+AKGGGALSAVAAT +PIIF+G+GEH DDF+PF F+S+LLG+GD+ GL++ + E +
Sbjct 252 GHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-L 310
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
+ + +IE+ G+FTL+DMY+QFQN++KMGP S+++ MIP
Sbjct 311 KLDDNKALIEKWKHGQFTLRDMYEQFQNIMKMGPFSQILGMIP 353
> ath:AT1G15310 ATHSRP54A (ARABIDOPSIS THALIANA SIGNAL RECOGNITION
PARTICLE 54 KDA SUBUNIT); 7S RNA binding / GTP binding
/ mRNA binding / nucleoside-triphosphatase/ nucleotide binding;
K03106 signal recognition particle subunit SRP54
Length=479
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 98/163 (60%), Positives = 133/163 (81%), Gaps = 1/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH+Q A+LFEEM+QVA+A PD ++FV+DS IGQA ++QA AF +VSVG+VIITK+D
Sbjct 192 SGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMD 251
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G+AKGGGALSAVAAT +P+IF+G+GEH D+F+ FD FVSRLLG GD GLV+ L+EV+
Sbjct 252 GHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVV 311
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
+ Q E++E +S+G FTL+ MYDQFQ L++ P++++ SM+P
Sbjct 312 PKDLQNELVENLSQGNFTLRSMYDQFQCSLRI-PLNQLFSMLP 353
> sce:YPR088C SRP54, SRH1; Signal recognition particle (SRP) subunit
(homolog of mammalian SRP54); contains the signal sequence-binding
activity of SRP, interacts with the SRP RNA, and
mediates binding of SRP to signal receptor; contains GTPase
domain; K03106 signal recognition particle subunit SRP54
Length=541
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 112/163 (68%), Gaps = 0/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH QE LF+EM ++++ + P+ + V+D+ IGQA Q+ AF S G++I+TK+D
Sbjct 200 SGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQSKAFKESSDFGAIILTKMD 259
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G+A+GGGA+SAVAAT PIIF+G+GEH D + F SF+S+LLG+GD+ L L+ V
Sbjct 260 GHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFISKLLGIGDIESLFEQLQTVS 319
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
+ E + +E I KGKFTL D Q Q ++KMGP+S + MIP
Sbjct 320 NKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQMIP 362
> hsa:650638 signal recognition particle 54 kDa protein-like
Length=168
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 79/135 (58%), Positives = 106/135 (78%), Gaps = 1/135 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
SGRH+QE +LFEEM QVA+A+ PD+IV+V+D+ IGQAC QA AF V V SVI+TKLD
Sbjct 34 SGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLD 93
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G+AKGGGALSAVAAT +PIIF+G+GEH DDF+PF F+S+LLG+GD+ GL++ + E +
Sbjct 94 GHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-L 152
Query 121 SAEKQQEMIERISKG 135
+ + +IE++ G
Sbjct 153 KLDDNEALIEKLKHG 167
> ath:AT5G03940 CPSRP54 (CHLOROPLAST SIGNAL RECOGNITION PARTICLE
54 KDA SUBUNIT); 7S RNA binding / GTP binding / mRNA binding
/ signal sequence binding; K03106 signal recognition particle
subunit SRP54
Length=564
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 90/163 (55%), Gaps = 0/163 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
+GR + + + +E++ V +NP +++ VVD+ GQ F + + I+TKLD
Sbjct 267 AGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLD 326
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G ++GG ALS +G PI +G GE +D +PF + R+LG+GD+ V EV+
Sbjct 327 GDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVM 386
Query 121 SAEKQQEMIERISKGKFTLQDMYDQFQNVLKMGPISKVMSMIP 163
E +++ ++I KF D Q + V KMG +++V+ MIP
Sbjct 387 RQEDAEDLQKKIMSAKFDFNDFLKQTRAVAKMGSMTRVLGMIP 429
> eco:b2610 ffh, ECK2607, JW5414; signal recognition particle
(SRP) component with 4.5S RNA (ffs); K03106 signal recognition
particle subunit SRP54
Length=453
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKLD 60
+GR + A+ +E++QV ++NP + +FVVD+ GQ + A AF ++ + V++TK+D
Sbjct 192 AGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVD 251
Query 61 GYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGDMGGLVNTLKEVI 120
G A+GG ALS TG PI FLG GE + +PF + SR+LG+GD+ L+ ++ +
Sbjct 252 GDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDVLSLIEDIESKV 311
Query 121 SAEKQQEMIERISKGK-FTLQDMYDQFQNVLKMGPISKVMSMIP 163
+ +++ ++ KG F L D +Q + + MG ++ +M +P
Sbjct 312 DRAQAEKLASKLKKGDGFDLNDFLEQLRQMKNMGGMASLMGKLP 355
> ath:AT2G45770 CPFTSY; CPFTSY; 7S RNA binding / GTP binding /
nucleoside-triphosphatase/ nucleotide binding; K03110 fused
signal recognition particle receptor
Length=366
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query 1 SGRHRQEAALFEEMQQVADAVN------PDDIVFVVDSHIGQACYDQAAAFAASVSVGSV 54
SGR +L EE+ AV P++I+ V+D + G QA F V + +
Sbjct 256 SGRLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTGLNMLPQAREFNEVVGITGL 315
Query 55 IITKLDGYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVS 101
I+TKLDG A+GG +S V G P+ F+G GE +D PFD +FV+
Sbjct 316 ILTKLDGSARGGCVVSVVEELGIPVKFIGVGEAVEDLQPFDPEAFVN 362
> eco:b3464 ftsY, ECK3448, JW3429; signal recognition particle
(SRP) receptor; K03110 fused signal recognition particle receptor
Length=497
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query 1 SGRHRQEAALFEEMQQVA------DAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSV 54
+GR + ++ L EE++++ D P +++ +D+ GQ QA F +V + +
Sbjct 384 AGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGI 443
Query 55 IITKLDGYAKGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLLGLGD 108
+TKLDG AKGG S G PI ++G GE +D PF A+ F+ L D
Sbjct 444 TLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED 497
> tpv:TP02_0423 signal recognition particle receptor subunit alpha;
K13431 signal recognition particle receptor subunit alpha
Length=579
Score = 55.1 bits (131), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGS------V 54
+GR + L + ++ NP+ I+FV ++ +G DQ F ++ G+ +
Sbjct 468 AGRMQDNEPLMAALTKLIVVNNPNLIIFVGEALVGNDAVDQLKKFNLAIGKGTDRTIDAL 527
Query 55 IITKLDGYA-KGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLL 104
++TK D K G ALS V TG PI+F+G+G+ + D P + LL
Sbjct 528 LLTKFDTVDDKVGAALSMVYITGKPILFVGNGQTYSDLQPLNIELITQFLL 578
> dre:569063 srpr, id:ibd1064, wu:fd12f02; signal recognition
particle receptor (docking protein); K13431 signal recognition
particle receptor subunit alpha
Length=650
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVS---------- 50
+GR + A L + ++ PD ++FV ++ +G DQ F +++
Sbjct 534 AGRMQDNAPLMTALAKLIAVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSKSDKPRL 593
Query 51 VGSVIITKLDGYA-KGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLL 104
+ +++TK D K G A+S TG PI+F+G+G+ + D +A + VS L+
Sbjct 594 IDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYSDLRSLNARAVVSALM 648
> pfa:PF13_0350 signal recognition particle receptor alpha subunit,
putative; K13431 signal recognition particle receptor
subunit alpha
Length=576
Score = 52.0 bits (123), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVS---------- 50
+GR + L + ++ NPD I+FV ++ +G DQ F +++
Sbjct 461 AGRMQDNEPLMRSLGKLILYNNPDLILFVGEALVGNDAIDQLKKFNQALTDATCNSTNKR 520
Query 51 -VGSVIITKLDGYA-KGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRL 103
+ +I+TK D K G ALS V TG PI+F+G G+ + F+ N V L
Sbjct 521 TIDGIILTKFDTVDDKVGTALSMVYLTGKPIVFVGVGQKYTHLKKFNVNMVVKAL 575
> ath:AT4G30600 signal recognition particle receptor alpha subunit
family protein; K13431 signal recognition particle receptor
subunit alpha
Length=634
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVS---------- 50
+GR + L + ++ + PD ++FV ++ +G DQ + F +S
Sbjct 519 AGRMQDNEPLMRALSKLINLNQPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSTSGNPRL 578
Query 51 VGSVIITKLDGYA-KGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLL 104
+ +++TK D K G ALS V +G+P++F+G G+ + D + + V LL
Sbjct 579 IDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKAIVKTLL 633
> cel:F38A1.8 hypothetical protein; K13431 signal recognition
particle receptor subunit alpha
Length=625
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVS---------- 50
+GR + L E+ ++ PD ++FV ++ +G DQ F +++
Sbjct 509 AGRMQDNEPLMRELAKLIRVNEPDLVLFVGEALVGNEAVDQLVKFNEALANHASPGQKPR 568
Query 51 -VGSVIITKLDGYA-KGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLL 104
+ +++TK D K G A+S TG PI+F+G G+ + D + + V LL
Sbjct 569 LIDGIVLTKFDTIDDKVGAAVSMTYITGQPIVFVGCGQTYSDLRNLNVGAVVHSLL 624
> cpv:cgd8_5260 Srp101p GTpase. signal recognition particle receptor
alpha subunit ; K13431 signal recognition particle receptor
subunit alpha
Length=548
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASV------SVGSV 54
+GR + L + + ++ NP+ ++FV ++ +G Q F + + +
Sbjct 437 AGRMQDNVPLMKSLAKLVQVNNPNLVLFVGEALVGNDAVHQLQVFNKYLVEFGDRPIDGI 496
Query 55 IITKLDGYA-KGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLL 104
I+TK D K G ALS V TG P++F+G+G+ + + S V+ LL
Sbjct 497 ILTKFDTVDDKVGAALSMVYTTGQPVVFVGTGQKYFNLKTLSVPSVVNALL 547
> tgo:TGME49_080610 signal recognition particle protein, putative
(EC:2.7.4.9); K13431 signal recognition particle receptor
subunit alpha
Length=564
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASV----------- 49
+GR + L + ++ +PD I+FV ++ +G DQ F ++
Sbjct 447 AGRMQDNEPLMRSLAKLVAMNSPDMILFVGEALVGNDAVDQLKKFNQALVDLTALGGRPP 506
Query 50 -SVGSVIITKLDGYA-KGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLL 104
+V +I+TK D K G ALS V TG P++F+G+G+ + + + V LL
Sbjct 507 RTVDGIILTKFDTVDDKVGAALSMVYITGQPVVFVGTGQKYPNLKKLNPTMVVKALL 563
> hsa:6734 SRPR, DP, MGC17355, MGC3650, MGC9571, Sralpha; signal
recognition particle receptor (docking protein); K13431 signal
recognition particle receptor subunit alpha
Length=610
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVS---------- 50
+GR + A L + ++ PD ++FV ++ +G DQ F +++
Sbjct 494 AGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRL 553
Query 51 VGSVIITKLDGYA-KGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLL 104
+ +++TK D K G A+S T PI+F+G+G+ + D +A + V+ L+
Sbjct 554 IDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALM 608
> mmu:67398 Srpr, 1300011P19Rik, D11Mgi27; signal recognition
particle receptor ('docking protein'); K13431 signal recognition
particle receptor subunit alpha
Length=636
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVS---------- 50
+GR + A L + ++ PD ++FV ++ +G DQ F +++
Sbjct 520 AGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRL 579
Query 51 VGSVIITKLDGYA-KGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLL 104
+ +++TK D K G A+S T PI+F+G+G+ + D +A + V+ L+
Sbjct 580 IDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALM 634
> sce:YDR292C SRP101; Signal recognition particle (SRP) receptor
- alpha subunit; contain GTPase domains; involved in SRP-dependent
protein targeting; interacts with Srp102p; K13431
signal recognition particle receptor subunit alpha
Length=621
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAA----AFAASVSVGSVII 56
+GR + L ++ AD PD I+ V ++ +G QA AF ++ II
Sbjct 512 AGRRHNDPTLMSPLKSFADQAKPDKIIMVGEALVGTDSVQQAKNFNDAFGKGRNLDFFII 571
Query 57 TKLDGYAKGGGAL-SAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRLL 104
+K D + G + + V ATG PI+F+G G+ + D V+ L+
Sbjct 572 SKCDTVGEMLGTMVNMVYATGIPILFVGVGQTYTDLRTLSVKWAVNTLM 620
> bbo:BBOV_III005280 17.m07472; SRP54-type protein, GTPase domain
containing protein; K13431 signal recognition particle receptor
subunit alpha
Length=566
Score = 42.4 bits (98), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 14/117 (11%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFAASVS---------- 50
+GR + L + ++ NP ++FV ++ +G DQ F ++
Sbjct 448 AGRMQDNEPLMTALAKLIHVNNPHLLLFVGEALVGNDAVDQLRKFNQAIQKMGDSSDELR 507
Query 51 ---VGSVIITKLDGYA-KGGGALSAVAATGAPIIFLGSGEHFDDFDPFDANSFVSRL 103
+ +++TK D K G ALS TG P++F+G+G+ + + + + V L
Sbjct 508 GRKIDGIVLTKFDTVDDKVGAALSMCYITGQPVVFVGTGQTYTNLAKLEIDDVVRAL 564
> cel:B0285.4 hypothetical protein
Length=333
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query 88 FDDFDPFDANSFVSRLL--GLGDMGGLVNTLKEVISAEKQQEMIERISKGKFTLQDMYDQ 145
F +++ F + ++++ LGD G ++ L+ SAEKQ+E + + DM
Sbjct 235 FVNYEQFRTSDAFTKVMEQNLGDRGIQLHGLEMCESAEKQEERFRNAGFKEVKVMDMNQI 294
Query 146 FQNVLKMGPISKV 158
F N L +S++
Sbjct 295 FNNFLDQKEVSRI 307
> cel:F57C12.5 mrp-1; Multidrug Resistance Protein family member
(mrp-1)
Length=1528
Score = 29.6 bits (65), Expect = 4.1, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 0/46 (0%)
Query 1 SGRHRQEAALFEEMQQVADAVNPDDIVFVVDSHIGQACYDQAAAFA 46
SG +Q +L + Q A+ V DD + VDSH+G+ ++ + A
Sbjct 740 SGGQKQRVSLARAVYQNAEIVLLDDPLSAVDSHVGKHIFENVISTA 785
> xla:495380 hypothetical LOC495380
Length=201
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query 8 AALFEEMQQVAD--------AVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKL 59
+ +F++M+QVA V D+ VD + G+ D AA V++GS+ +TK
Sbjct 85 SMVFKQMEQVAQFLKAAEEYGVVKTDVFQTVDLYEGK---DMAAVQRTIVALGSIAVTKN 141
Query 60 DGYAKG 65
DG KG
Sbjct 142 DGQYKG 147
> eco:b0830 gsiB, ECK0820, JW5111, yliB; glutathione periplasmic
binding protein, ABC superfamily transporter; K13889 glutathione
transport system substrate-binding protein
Length=512
Score = 29.6 bits (65), Expect = 4.7, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Query 68 ALSAVAATGAPIIFLGSGEHFDDFDPFDAN---------SFVSRLLGLGDMGGLVNTLKE 118
AL A A A + + G +F DP+DAN SF L GL L N L E
Sbjct 18 ALMASCAFAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAE 77
> xla:399014 tagln, MGC68550; transgelin
Length=200
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query 8 AALFEEMQQVAD--------AVNPDDIVFVVDSHIGQACYDQAAAFAASVSVGSVIITKL 59
+ +F++M+QVA V D+ VD + G+ D AA V++GS+ +TK
Sbjct 85 SMVFKQMEQVAQFLKAAEDYGVVKTDMFQTVDLYEGK---DMAAVQRTIVALGSIAVTKN 141
Query 60 DGYAKG 65
DG KG
Sbjct 142 DGQYKG 147
> xla:496107 ppara, PPARalpha, nr1c1, xPPARalpha, xppara; peroxisome
proliferator-activated receptor alpha
Length=469
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query 90 DFDPFDANSFVSRLLGLGDMGGLVNTLKEVISAEKQQEMIERISK 134
+ D D + FV+ L+ GD GLVN V S EK QE I + K
Sbjct 370 ELDDSDLSLFVAALICCGDRPGLVN----VSSIEKMQESIVHVLK 410
Lambda K H
0.319 0.135 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3832864436
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40