bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_3287_orf3
Length=66
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_067400 ribosomal protein L32, putative ; K02912 lar... 99.8 2e-21
cpv:cgd6_3340 60S ribosomal protein L32 ; K02912 large subunit... 80.9 1e-15
bbo:BBOV_III002830 17.m07268; 60S ribosomal protein L32; K0291... 76.3 2e-14
pfa:PFI0190w 60S ribosomal protein L32, putative; K02912 large... 73.6 2e-13
dre:556556 MGC136952, MGC174241, RPL32; zgc:136952; K02912 lar... 68.6 5e-12
tpv:TP04_0094 60S ribosomal protein L32; K02912 large subunit ... 68.6 5e-12
mmu:19951 Rpl32, AU020185, rpL32-3A; ribosomal protein L32; K0... 67.8 7e-12
hsa:6161 RPL32; ribosomal protein L32; K02912 large subunit ri... 67.8 7e-12
mmu:100504872 60S ribosomal protein L32-like 67.8 8e-12
xla:447129 rpl32, MGC85374, MGC86311; ribosomal protein L32; K... 65.5 4e-11
ath:AT4G18100 60S ribosomal protein L32 (RPL32A); K02912 large... 62.4 3e-10
ath:AT5G46430 60S ribosomal protein L32 (RPL32B) 62.4 3e-10
mmu:245405 Gm4987, EG245405; predicted gene 4987 62.4
mmu:621697 Gm6251, EG621697; predicted gene 6251 58.9
sce:YBL092W RPL32; L32; K02912 large subunit ribosomal protein... 56.2 2e-08
cel:T24B8.1 rpl-32; Ribosomal Protein, Large subunit family me... 42.4 4e-04
hsa:223075 CCDC129, FLJ38344; coiled-coil domain containing 129 28.5
> tgo:TGME49_067400 ribosomal protein L32, putative ; K02912 large
subunit ribosomal protein L32e
Length=134
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 50/56 (89%), Gaps = 0/56 (0%)
Query 11 MAPVSTVKRTIVKKRTKRFNRFQSDRYKRLSPSWRKPKGIDCRVRRKFKGTNLMPN 66
MAPVSTVKR+IVKKR K F RFQSDRYKR+ SWRKPKGIDCRVRRKFKGTN MPN
Sbjct 1 MAPVSTVKRSIVKKRVKSFPRFQSDRYKRVKSSWRKPKGIDCRVRRKFKGTNTMPN 56
> cpv:cgd6_3340 60S ribosomal protein L32 ; K02912 large subunit
ribosomal protein L32e
Length=137
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 42/48 (87%), Gaps = 0/48 (0%)
Query 18 KRTIVKKRTKRFNRFQSDRYKRLSPSWRKPKGIDCRVRRKFKGTNLMP 65
K+ I+KKRTK+F RFQSDR+ R+ P+WRKPKGIDCRVRRKFKG LMP
Sbjct 11 KKAIIKKRTKKFTRFQSDRFLRVKPNWRKPKGIDCRVRRKFKGNYLMP 58
> bbo:BBOV_III002830 17.m07268; 60S ribosomal protein L32; K02912
large subunit ribosomal protein L32e
Length=132
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%), Gaps = 0/49 (0%)
Query 17 VKRTIVKKRTKRFNRFQSDRYKRLSPSWRKPKGIDCRVRRKFKGTNLMP 65
V R +V KRTK+F RFQSDR+KR+ SWRKPKGIDCRVRR+FKGT L P
Sbjct 5 VFRGLVHKRTKKFRRFQSDRFKRVKESWRKPKGIDCRVRRRFKGTVLTP 53
> pfa:PFI0190w 60S ribosomal protein L32, putative; K02912 large
subunit ribosomal protein L32e
Length=131
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 38/41 (92%), Gaps = 0/41 (0%)
Query 25 RTKRFNRFQSDRYKRLSPSWRKPKGIDCRVRRKFKGTNLMP 65
RTK+F RFQS+R+ R+ P+WRKP+GIDCRVRR++KGTNLMP
Sbjct 13 RTKKFTRFQSNRFMRVKPAWRKPRGIDCRVRRRYKGTNLMP 53
> dre:556556 MGC136952, MGC174241, RPL32; zgc:136952; K02912 large
subunit ribosomal protein L32e
Length=135
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 38/46 (82%), Gaps = 0/46 (0%)
Query 21 IVKKRTKRFNRFQSDRYKRLSPSWRKPKGIDCRVRRKFKGTNLMPN 66
IVKKRTK+F R QSDRY ++ +WRKP+GID RVRR+FKG LMPN
Sbjct 12 IVKKRTKKFIRHQSDRYVKIRANWRKPRGIDNRVRRRFKGQMLMPN 57
> tpv:TP04_0094 60S ribosomal protein L32; K02912 large subunit
ribosomal protein L32e
Length=132
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%), Gaps = 0/45 (0%)
Query 21 IVKKRTKRFNRFQSDRYKRLSPSWRKPKGIDCRVRRKFKGTNLMP 65
+V KRTK+F RF SDR+KRL +WRKPKGID RVRR+FK T LMP
Sbjct 9 LVHKRTKKFRRFHSDRFKRLRTTWRKPKGIDNRVRRRFKSTVLMP 53
> mmu:19951 Rpl32, AU020185, rpL32-3A; ribosomal protein L32;
K02912 large subunit ribosomal protein L32e
Length=135
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 40/50 (80%), Gaps = 0/50 (0%)
Query 17 VKRTIVKKRTKRFNRFQSDRYKRLSPSWRKPKGIDCRVRRKFKGTNLMPN 66
VK IVKKRTK+F R QSDRY ++ +WRKP+GID RVRR+FKG LMPN
Sbjct 8 VKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPN 57
> hsa:6161 RPL32; ribosomal protein L32; K02912 large subunit
ribosomal protein L32e
Length=135
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 40/50 (80%), Gaps = 0/50 (0%)
Query 17 VKRTIVKKRTKRFNRFQSDRYKRLSPSWRKPKGIDCRVRRKFKGTNLMPN 66
VK IVKKRTK+F R QSDRY ++ +WRKP+GID RVRR+FKG LMPN
Sbjct 8 VKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPN 57
> mmu:100504872 60S ribosomal protein L32-like
Length=135
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 40/50 (80%), Gaps = 0/50 (0%)
Query 17 VKRTIVKKRTKRFNRFQSDRYKRLSPSWRKPKGIDCRVRRKFKGTNLMPN 66
VK IVKKRTK+F R QSDRY ++ +WRKP+GID RVRR+FKG LMPN
Sbjct 8 VKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPN 57
> xla:447129 rpl32, MGC85374, MGC86311; ribosomal protein L32;
K02912 large subunit ribosomal protein L32e
Length=135
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 37/46 (80%), Gaps = 0/46 (0%)
Query 21 IVKKRTKRFNRFQSDRYKRLSPSWRKPKGIDCRVRRKFKGTNLMPN 66
IVKKRTK+F R QSDRY ++ +WRKP+GID R RR+FKG LMPN
Sbjct 12 IVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRARRRFKGQILMPN 57
> ath:AT4G18100 60S ribosomal protein L32 (RPL32A); K02912 large
subunit ribosomal protein L32e
Length=133
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 0/53 (0%)
Query 14 VSTVKRTIVKKRTKRFNRFQSDRYKRLSPSWRKPKGIDCRVRRKFKGTNLMPN 66
V + + +VKKR+ +F R QSDR + SWR+PKGID RVRRKFKG LMPN
Sbjct 3 VPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPN 55
> ath:AT5G46430 60S ribosomal protein L32 (RPL32B)
Length=133
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 0/53 (0%)
Query 14 VSTVKRTIVKKRTKRFNRFQSDRYKRLSPSWRKPKGIDCRVRRKFKGTNLMPN 66
V + + +VKKR+ +F R QSDR + SWR+PKGID RVRRKFKG LMPN
Sbjct 3 VPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPN 55
> mmu:245405 Gm4987, EG245405; predicted gene 4987
Length=135
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 38/50 (76%), Gaps = 0/50 (0%)
Query 17 VKRTIVKKRTKRFNRFQSDRYKRLSPSWRKPKGIDCRVRRKFKGTNLMPN 66
VK IVKKRTK+F R QSDRY ++ +W KP+GI RVRR+FKG LMPN
Sbjct 8 VKPKIVKKRTKKFIRHQSDRYVKIKQNWWKPRGIYNRVRRRFKGEILMPN 57
> mmu:621697 Gm6251, EG621697; predicted gene 6251
Length=133
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
Query 17 VKRTIVKKRTKRFNRFQSDRYKRLSPSWRKPKGIDCRVRRKFKGTNLMPN 66
VK IVKKRTK+F R QSDRY ++ +WRKP+GID RVRR +G LMPN
Sbjct 8 VKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDHRVRR--RGQILMPN 55
> sce:YBL092W RPL32; L32; K02912 large subunit ribosomal protein
L32e
Length=130
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 0/45 (0%)
Query 21 IVKKRTKRFNRFQSDRYKRLSPSWRKPKGIDCRVRRKFKGTNLMP 65
IVKK TK+F R SDRY R++ +WRK KGID VRR+F+G P
Sbjct 9 IVKKHTKKFKRHHSDRYHRVAENWRKQKGIDSVVRRRFRGNISQP 53
> cel:T24B8.1 rpl-32; Ribosomal Protein, Large subunit family
member (rpl-32); K02912 large subunit ribosomal protein L32e
Length=134
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 0/41 (0%)
Query 11 MAPVSTVKRTIVKKRTKRFNRFQSDRYKRLSPSWRKPKGID 51
M VS K +VKK+ +F R +SDRY+R++PSWRKPKGID
Sbjct 1 MVHVSGTKVKVVKKKLTKFKRHESDRYRRVAPSWRKPKGID 41
> hsa:223075 CCDC129, FLJ38344; coiled-coil domain containing
129
Length=1044
Score = 28.5 bits (62), Expect = 5.4, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query 7 PASTM----APVSTVKRTIVKKRTKRFNRFQSDRYKRLS 41
P S+M AP S V VK RT++ N FQ+++ K LS
Sbjct 338 PCSSMPAKQAPPSCVSEGSVKGRTQKENLFQTNKLKSLS 376
Lambda K H
0.321 0.132 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2042713188
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40