bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_3354_orf1
Length=108
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_033520 ATP-dependent RNA helicase, putative (EC:3.4... 99.4 2e-21
hsa:1665 DHX15, DBP1, DDX15, HRH2, PRP43, PRPF43, PrPp43p; DEA... 74.7 6e-14
cpv:cgd8_4100 PRP43 involved in spliceosome disassembly mRNA s... 74.3 9e-14
cel:F56D2.6 hypothetical protein; K12820 pre-mRNA-splicing fac... 73.9 1e-13
ath:AT2G47250 RNA helicase, putative; K12820 pre-mRNA-splicing... 73.9 1e-13
ath:AT3G62310 RNA helicase, putative; K12820 pre-mRNA-splicing... 71.6 5e-13
dre:321931 dhx15, im:2639158, wu:fb38f09, wu:fk62f05; DEAH (As... 71.6 5e-13
ath:AT5G14900 helicase associated (HA2) domain-containing prot... 70.9 9e-13
sce:YGL120C PRP43; Prp43p (EC:3.6.1.-); K12820 pre-mRNA-splici... 68.9 4e-12
xla:414571 dhx15, MGC81281; DEAH (Asp-Glu-Ala-His) box polypep... 67.8 7e-12
pfa:PFI0860c ATP-dependent RNA Helicase, putative; K12820 pre-... 66.6 2e-11
tpv:TP01_1019 ATP-dependent RNA helicase; K12820 pre-mRNA-spli... 66.6 2e-11
ath:AT4G16680 RNA helicase, putative 53.1 2e-07
ath:AT1G32490 ESP3; ESP3 (ENHANCED SILENCING PHENOTYPE 3); ATP... 52.8 3e-07
hsa:8449 DHX16, DBP2, DDX16, PRO2014, PRP8, PRPF2, Prp2; DEAH ... 51.6 6e-07
ath:AT2G35340 MEE29; MEE29 (maternal effect embryo arrest 29);... 51.6 7e-07
mmu:69192 Dhx16, 2410006N22Rik, DBP2, Ddx16, mKIAA0577; DEAH (... 51.2 7e-07
mmu:217207 Dhx8, Ddx8, KIAA4096, MGC31290, mDEAH6, mKIAA4096; ... 49.3 3e-06
hsa:1659 DHX8, DDX8, HRH1, PRP22, PRPF22; DEAH (Asp-Glu-Ala-Hi... 49.3 3e-06
dre:606595 im:7153552; K12818 ATP-dependent RNA helicase DHX8/... 49.3 3e-06
cpv:cgd6_1410 pre-mRNA splicing factor ATP-dependent RNA helic... 48.9 4e-06
dre:336645 dhx16, fa91b12, wu:fa91b12, zgc:55590; DEAH (Asp-Gl... 48.9 4e-06
sce:YER013W PRP22; DEAH-box RNA-dependent ATPase/ATP-dependent... 48.5 5e-06
bbo:BBOV_I004340 19.m02126; pre-mRNA splicing factor RNA helic... 48.1 6e-06
pfa:PF10_0294 RNA helicase, putative; K12818 ATP-dependent RNA... 48.1 7e-06
bbo:BBOV_IV002560 21.m03072; DEAH box RNA helicase (EC:3.6.1.-... 48.1 7e-06
cpv:cgd1_2650 hypothetical protein 48.1 7e-06
tgo:TGME49_063650 pre-mRNA splicing factor RNA helicase, putat... 47.8 9e-06
cel:C04H5.6 mog-4; Masculinisation Of Germline family member (... 47.8 9e-06
mmu:64340 Dhx38, 5730550P09Rik, AI325984, AW540902, Ddx38, Prp... 46.2 2e-05
dre:393850 dhx38, MGC63517, zgc:63517; DEAH (Asp-Glu-Ala-His) ... 46.2 2e-05
hsa:9785 DHX38, DDX38, KIAA0224, PRP16, PRPF16; DEAH (Asp-Glu-... 46.2 2e-05
bbo:BBOV_IV011160 23.m05966; RNA helicase (EC:3.6.1.-); K12813... 45.8 3e-05
hsa:60625 DHX35, C20orf15, DDX35, FLJ22759, KAIA0875; DEAH (As... 45.8 3e-05
bbo:BBOV_I002940 19.m02117; RNA helicase; K12818 ATP-dependent... 44.7 7e-05
tpv:TP01_0641 RNA helicase 44.7 8e-05
tgo:TGME49_112280 ATP-dependent RNA helicase, putative (EC:3.4... 44.7 8e-05
ath:AT3G26560 ATP-dependent RNA helicase, putative; K12818 ATP... 44.3 1e-04
tpv:TP03_0394 splicing factor; K12815 pre-mRNA-splicing factor... 43.5 2e-04
cel:EEED8.5 mog-5; Masculinisation Of Germline family member (... 43.5 2e-04
mmu:71715 Dhx35, 1200009D07Rik, Ddx35; DEAH (Asp-Glu-Ala-His) ... 42.7 3e-04
tgo:TGME49_060200 ATP-dependent RNA helicase, putative (EC:3.6... 42.0 4e-04
tpv:TP01_0544 RNA helicase 40.8 0.001
ath:AT5G13010 EMB3011 (embryo defective 3011); ATP binding / R... 40.4 0.002
cel:K03H1.2 mog-1; Masculinisation Of Germline family member (... 38.5 0.005
ath:AT4G18465 RNA helicase, putative; K13117 ATP-dependent RNA... 38.1 0.006
> tgo:TGME49_033520 ATP-dependent RNA helicase, putative (EC:3.4.22.44);
K12820 pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX15/PRP43 [EC:3.6.4.13]
Length=801
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 60/80 (75%), Gaps = 0/80 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKLKNKLQKEAN 60
WV+YHE+VLTSK FIRT TQVRG+WLL+QAPHFY+P++FP DA+K L+K+ + +KE
Sbjct 721 WVIYHEYVLTSKNFIRTITQVRGDWLLEQAPHFYNPDDFPECDAKKVLKKMIERQKKEKE 780
Query 61 NNTTSSSSSSSSSNGGSSSS 80
T+ ++++ S G +S
Sbjct 781 AKATNGNAANESKAPGVPAS 800
> hsa:1665 DHX15, DBP1, DDX15, HRH2, PRP43, PRPF43, PrPp43p; DEAH
(Asp-Glu-Ala-His) box polypeptide 15 (EC:3.6.4.13); K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
[EC:3.6.4.13]
Length=795
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 44/56 (78%), Gaps = 0/56 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKLKNKLQ 56
WV+Y+EFVLT+K +IRTCT ++ EWL++ AP +YD FP +A++QL+++ KLQ
Sbjct 733 WVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQ 788
> cpv:cgd8_4100 PRP43 involved in spliceosome disassembly mRNA
splicing ; K12820 pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX15/PRP43 [EC:3.6.4.13]
Length=714
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 42/51 (82%), Gaps = 0/51 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKL 51
WV+Y+EFVLTS+ FIRT T++RGEWLL+ +P +Y+ E+FP D++K+L L
Sbjct 656 WVLYNEFVLTSRNFIRTVTKIRGEWLLEISPKYYNLEDFPECDSKKKLAHL 706
> cel:F56D2.6 hypothetical protein; K12820 pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13]
Length=739
Score = 73.9 bits (180), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 42/59 (71%), Gaps = 0/59 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKLKNKLQKEA 59
W +Y+EFVLT+K FIRT T VR EWLLQ AP +YD + FP GD +++L + LQ+ A
Sbjct 677 WALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDTKRKLTTVMQTLQRNA 735
> ath:AT2G47250 RNA helicase, putative; K12820 pre-mRNA-splicing
factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13]
Length=729
Score = 73.9 bits (180), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 0/62 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKLKNKLQKEAN 60
WV+Y+E+VLT++ FIRT T +RGEWL+ A H+YD FP +A++ LEKL K ++E N
Sbjct 664 WVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCEAKRALEKLYKKREREKN 723
Query 61 NN 62
+
Sbjct 724 ES 725
> ath:AT3G62310 RNA helicase, putative; K12820 pre-mRNA-splicing
factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13]
Length=726
Score = 71.6 bits (174), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 43/58 (74%), Gaps = 0/58 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKLKNKLQKE 58
WV+Y+E+VLTS+ FIRT T +RGEWL+ A H+YD FP +A++ +EKL K ++E
Sbjct 660 WVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEAKRVIEKLYKKRERE 717
> dre:321931 dhx15, im:2639158, wu:fb38f09, wu:fk62f05; DEAH (Asp-Glu-Ala-His)
box polypeptide 15 (EC:3.6.1.-); K12820 pre-mRNA-splicing
factor ATP-dependent RNA helicase DHX15/PRP43
[EC:3.6.4.13]
Length=769
Score = 71.6 bits (174), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 45/58 (77%), Gaps = 0/58 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKLKNKLQKE 58
WV+Y+EFVLT+K +IRTCT ++ EWL++ AP +Y+ FP +A++QLE++ KLQ +
Sbjct 707 WVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYEMSNFPQCEAKRQLERIVAKLQTK 764
> ath:AT5G14900 helicase associated (HA2) domain-containing protein;
K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase
DHX15/PRP43 [EC:3.6.4.13]
Length=301
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEK--LKNKLQKE 58
WVVY+E+V TS+ FIRT T +RGEWL+ APH+Y FP +A++ LE+ K KL +E
Sbjct 233 WVVYNEYVFTSRNFIRTVTHIRGEWLVDVAPHYYKLANFPSSEAKRVLERHYKKRKLSEE 292
Query 59 ANNNTTSSS 67
+ S+S
Sbjct 293 RSCKLYSNS 301
> sce:YGL120C PRP43; Prp43p (EC:3.6.1.-); K12820 pre-mRNA-splicing
factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13]
Length=767
Score = 68.9 bits (167), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 0/57 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKLKNKLQK 57
WV+Y+EFVLTSK +IRT T VR EWL++ AP +YD F GD + LE++K K+ +
Sbjct 693 WVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQKGDVKLSLERIKEKVDR 749
> xla:414571 dhx15, MGC81281; DEAH (Asp-Glu-Ala-His) box polypeptide
15; K12820 pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX15/PRP43 [EC:3.6.4.13]
Length=761
Score = 67.8 bits (164), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 0/58 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKLKNKLQKE 58
WV+Y+EFVLT+K +IRTCT ++ EWL++ A +YD FP +A++QLE++ K Q +
Sbjct 699 WVLYNEFVLTTKNYIRTCTDIKPEWLVKIAAQYYDMGNFPQCEAKRQLERIVAKFQTK 756
> pfa:PFI0860c ATP-dependent RNA Helicase, putative; K12820 pre-mRNA-splicing
factor ATP-dependent RNA helicase DHX15/PRP43
[EC:3.6.4.13]
Length=820
Score = 66.6 bits (161), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 41/55 (74%), Gaps = 0/55 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKLKNKL 55
WVVYHE +LTSK FIRT T++ G+WLL+ AP++Y+ E+ P +A+ L+ L KL
Sbjct 764 WVVYHELLLTSKNFIRTVTKIEGKWLLEIAPNYYNLEDLPNSEAKNDLKMLHKKL 818
> tpv:TP01_1019 ATP-dependent RNA helicase; K12820 pre-mRNA-splicing
factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13]
Length=729
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 33/39 (84%), Gaps = 0/39 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEF 39
WV+YHEF+ TSK +IRT T+++GEWL++ APH+++P E
Sbjct 677 WVIYHEFIYTSKNYIRTVTEIKGEWLMELAPHYFNPYEM 715
> ath:AT4G16680 RNA helicase, putative
Length=883
Score = 53.1 bits (126), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFY---DPEEFPPGDARKQLEKLKNKLQK 57
W+VYHE VLT+K ++R T+++ EWL++ APH+Y D E+ P ++++E+ +
Sbjct 806 WLVYHELVLTTKEYMRHTTEMKPEWLIEIAPHYYKLKDIEDTRPKKTQRRIEEASTS-KV 864
Query 58 EANNNTTSSSSSSSSSN 74
+ N T +S ++ +
Sbjct 865 DTNKKTRTSKVDTNKKS 881
> ath:AT1G32490 ESP3; ESP3 (ENHANCED SILENCING PHENOTYPE 3); ATP
binding / ATP-dependent RNA helicase/ ATP-dependent helicase/
helicase/ nucleic acid binding; K12813 pre-mRNA-splicing
factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13]
Length=1044
Score = 52.8 bits (125), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 0/46 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARK 46
WVVYHE VLTSK ++R T+++ EWL++ APH+Y ++ ++K
Sbjct 989 WVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1034
> hsa:8449 DHX16, DBP2, DDX16, PRO2014, PRP8, PRPF2, Prp2; DEAH
(Asp-Glu-Ala-His) box polypeptide 16 (EC:3.6.4.13); K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13]
Length=981
Score = 51.6 bits (122), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 0/51 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKL 51
W++YHE VLT+K F+R ++ WLL+ APH+Y +E A+K +K+
Sbjct 923 WLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKI 973
> ath:AT2G35340 MEE29; MEE29 (maternal effect embryo arrest 29);
ATP binding / ATP-dependent RNA helicase/ ATP-dependent helicase/
helicase/ nucleic acid binding
Length=1044
Score = 51.6 bits (122), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 33/46 (71%), Gaps = 0/46 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARK 46
WVVYH+ VLTSK ++R T+++ EWL++ APH+Y ++ ++K
Sbjct 989 WVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKDVEDATSKK 1034
> mmu:69192 Dhx16, 2410006N22Rik, DBP2, Ddx16, mKIAA0577; DEAH
(Asp-Glu-Ala-His) box polypeptide 16 (EC:3.6.4.13); K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13]
Length=1044
Score = 51.2 bits (121), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 0/51 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKL 51
W++YHE VLT+K F+R ++ WLL+ APH+Y +E A+K +K+
Sbjct 986 WLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKV 1036
> mmu:217207 Dhx8, Ddx8, KIAA4096, MGC31290, mDEAH6, mKIAA4096;
DEAH (Asp-Glu-Ala-His) box polypeptide 8 (EC:3.6.4.13); K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Length=1244
Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFY---DPEEFPPGDARKQLEKLKNKLQK 57
WVVYHE VLT+K ++R T + WL++ AP F+ DP + +++LE L N+ ++
Sbjct 1172 WVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEE 1231
> hsa:1659 DHX8, DDX8, HRH1, PRP22, PRPF22; DEAH (Asp-Glu-Ala-His)
box polypeptide 8 (EC:3.6.4.13); K12818 ATP-dependent RNA
helicase DHX8/PRP22 [EC:3.6.4.13]
Length=1220
Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFY---DPEEFPPGDARKQLEKLKNKLQK 57
WVVYHE VLT+K ++R T + WL++ AP F+ DP + +++LE L N+ ++
Sbjct 1148 WVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEE 1207
> dre:606595 im:7153552; K12818 ATP-dependent RNA helicase DHX8/PRP22
[EC:3.6.4.13]
Length=1210
Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFY---DPEEFPPGDARKQLEKLKNKLQK 57
WVVYHE VLT+K ++R T + WL++ AP F+ DP +++LE L N+ ++
Sbjct 1138 WVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTRLSKQKKQQRLEPLYNRYEE 1197
> cpv:cgd6_1410 pre-mRNA splicing factor ATP-dependent RNA helicase
; K12818 ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Length=1005
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFY---DPEEFPPGDARKQLEKLKNKLQ 56
W++YHE V TSK +IR C ++ WL+ AP+ + D ++ +++++ L NK +
Sbjct 935 WILYHELVFTSKEYIRDCCTIKPHWLVDFAPNLFQFADQDQLSKRKKKEKIQPLYNKYE 993
> dre:336645 dhx16, fa91b12, wu:fa91b12, zgc:55590; DEAH (Asp-Glu-Ala-His)
box polypeptide 16 (EC:3.6.4.13); K12813 pre-mRNA-splicing
factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13]
Length=1054
Score = 48.9 bits (115), Expect = 4e-06, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 0/50 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEK 50
W++YHE V T+K F+R ++ WLL+ APH+Y +E ++K K
Sbjct 996 WMIYHELVFTTKEFMRQVIEIESGWLLEVAPHYYKNKELEDSSSKKMPRK 1045
> sce:YER013W PRP22; DEAH-box RNA-dependent ATPase/ATP-dependent
RNA helicase, associates with lariat intermediates before
the second catalytic step of splicing; mediates ATP-dependent
mRNA release from the spliceosome and unwinds RNA duplexes
(EC:3.6.1.-); K12818 ATP-dependent RNA helicase DHX8/PRP22
[EC:3.6.4.13]
Length=1145
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEK------LKNK 54
+V+YH VLTS+ ++ T + +WLL+ APHFY GDA Q K L NK
Sbjct 1066 YVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFY-----KAGDAESQSRKKAKIIPLHNK 1120
Query 55 LQKEAN 60
K+ N
Sbjct 1121 FAKDQN 1126
> bbo:BBOV_I004340 19.m02126; pre-mRNA splicing factor RNA helicase;
K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase
DHX15/PRP43 [EC:3.6.4.13]
Length=703
Score = 48.1 bits (113), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 0/49 (0%)
Query 2 VVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEK 50
VVYH+ V TS+ F+RT + V WLL+ P ++DP P + R+ +++
Sbjct 650 VVYHQIVHTSRTFLRTVSSVELSWLLETTPEYFDPNTIPNRELRELIKR 698
> pfa:PF10_0294 RNA helicase, putative; K12818 ATP-dependent RNA
helicase DHX8/PRP22 [EC:3.6.4.13]
Length=1290
Score = 48.1 bits (113), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 6/62 (9%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKLKNKLQKEAN 60
+VVYHE VLT+K +IR CT ++ +WL+Q AP+ + P + K++ K+K + + E
Sbjct 1220 FVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPAD------EKKISKIKLREKIEPL 1273
Query 61 NN 62
+N
Sbjct 1274 HN 1275
> bbo:BBOV_IV002560 21.m03072; DEAH box RNA helicase (EC:3.6.1.-);
K12815 pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16 [EC:3.6.4.13]
Length=1016
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGD-ARKQLEKLKN-KLQKE 58
+VVYHE V+TSK ++R T V EWL + P+F+ + G A++ +KL+N +L++E
Sbjct 921 YVVYHEVVITSKEYMRHVTAVDAEWLYELGPNFFYLKNIDAGGSAQRTKDKLENERLRQE 980
> cpv:cgd1_2650 hypothetical protein
Length=867
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%), Gaps = 0/38 (0%)
Query 2 VVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEF 39
+ Y E VLT+K ++R T+++ +WLL+ APH+Y ++F
Sbjct 825 ITYTELVLTTKEYMRNLTEIKTDWLLEVAPHYYHTDDF 862
> tgo:TGME49_063650 pre-mRNA splicing factor RNA helicase, putative
(EC:3.4.22.44); K12813 pre-mRNA-splicing factor ATP-dependent
RNA helicase DHX16 [EC:3.6.4.13]
Length=1041
Score = 47.8 bits (112), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query 2 VVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKLKNKLQKEAN 60
V+Y E VLT+K ++R ++R +WLL+ APHFY +E G Q+ K + ++++E +
Sbjct 984 VLYTELVLTTKEYMRNVLEIRPDWLLEVAPHFYRDKELELGRMPLQM-KQRQRIKQETD 1041
> cel:C04H5.6 mog-4; Masculinisation Of Germline family member
(mog-4); K12813 pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16 [EC:3.6.4.13]
Length=1008
Score = 47.8 bits (112), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKLKNKLQKE 58
WVVY E V TSK F+R +++ WLL+ APH+Y E K++ K K K K+
Sbjct 949 WVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDA-TNKKMPKNKGKSGKD 1005
> mmu:64340 Dhx38, 5730550P09Rik, AI325984, AW540902, Ddx38, Prp16,
mKIAA0224; DEAH (Asp-Glu-Ala-His) box polypeptide 38 (EC:3.6.4.13);
K12815 pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP16 [EC:3.6.4.13]
Length=1228
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 0/34 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFY 34
++VYHE V+T+K +++ T V GEWL + P FY
Sbjct 1117 YIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFY 1150
> dre:393850 dhx38, MGC63517, zgc:63517; DEAH (Asp-Glu-Ala-His)
box polypeptide 38 (EC:3.6.4.13); K12815 pre-mRNA-splicing
factor ATP-dependent RNA helicase PRP16 [EC:3.6.4.13]
Length=1258
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 0/34 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFY 34
+++YHE V+T+K +++ T V GEWL + P FY
Sbjct 1147 YIIYHELVMTTKEYMQCVTAVDGEWLAELGPMFY 1180
> hsa:9785 DHX38, DDX38, KIAA0224, PRP16, PRPF16; DEAH (Asp-Glu-Ala-His)
box polypeptide 38 (EC:3.6.4.13); K12815 pre-mRNA-splicing
factor ATP-dependent RNA helicase PRP16 [EC:3.6.4.13]
Length=1227
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 0/34 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFY 34
++VYHE V+T+K +++ T V GEWL + P FY
Sbjct 1116 YIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFY 1149
> bbo:BBOV_IV011160 23.m05966; RNA helicase (EC:3.6.1.-); K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
[EC:3.6.4.13]
Length=931
Score = 45.8 bits (107), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query 2 VVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKLKN 53
VVY + V+T++ ++R Q+R EWL Q APH+Y + P K++ K+K+
Sbjct 881 VVYTDLVMTTRQYMRIVAQIRPEWLSQLAPHYYSSDH-PAIQGTKKMPKMKS 931
> hsa:60625 DHX35, C20orf15, DDX35, FLJ22759, KAIA0875; DEAH (Asp-Glu-Ala-His)
box polypeptide 35 (EC:3.6.4.13); K13117 ATP-dependent
RNA helicase DDX35 [EC:3.6.4.13]
Length=672
Score = 45.8 bits (107), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 0/34 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFY 34
WV+Y+E + TSK ++R T + WLL+ APHFY
Sbjct 621 WVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 654
> bbo:BBOV_I002940 19.m02117; RNA helicase; K12818 ATP-dependent
RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Length=1156
Score = 44.7 bits (104), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEE-FPPGDARKQLEKLKNKLQKE 58
+VVYHE V+T+K ++R T V+ +WLL+ AP + E +++E L NK +++
Sbjct 1088 YVVYHELVMTTKEYMRDLTIVKAQWLLELAPSMFKRSEGVSKSKMGQKIEPLHNKFEEK 1146
> tpv:TP01_0641 RNA helicase
Length=974
Score = 44.7 bits (104), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 30/39 (76%), Gaps = 0/39 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEF 39
+VVY++ VLT+K FIR ++++ +WL++ APH+Y +F
Sbjct 936 FVVYNDLVLTTKHFIRQVSEIQAKWLMELAPHYYQNIKF 974
> tgo:TGME49_112280 ATP-dependent RNA helicase, putative (EC:3.4.22.44);
K12818 ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Length=1206
Score = 44.7 bits (104), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFY---DPEEFPPGDARKQLEKLKNKL 55
W++YHE VLT++ ++R C + +WL++ AP + D + R+++E L ++
Sbjct 1136 WLIYHELVLTTREYLRDCCTIEPQWLVEVAPKLFKLADQQRLSRRKMRERIEPLYDRF 1193
> ath:AT3G26560 ATP-dependent RNA helicase, putative; K12818 ATP-dependent
RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Length=1168
Score = 44.3 bits (103), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 0/52 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKLK 52
WV+YH+ V+T+K ++R T + +WL++ AP F+ + RK+ E+++
Sbjct 1098 WVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIE 1149
> tpv:TP03_0394 splicing factor; K12815 pre-mRNA-splicing factor
ATP-dependent RNA helicase PRP16 [EC:3.6.4.13]
Length=1007
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGD-ARKQLEKLKNK 54
+VVYHE V+T+K ++R T V EWL + AP+F+ + F + +K ++++NK
Sbjct 917 YVVYHEVVITTKEYMRFVTTVEPEWLYELAPNFFYLKNFEMCEMVQKSRDRIENK 971
> cel:EEED8.5 mog-5; Masculinisation Of Germline family member
(mog-5); K12818 ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Length=1200
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 0/62 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKLKNKLQKEAN 60
WVVYHE V+T+K ++R T + +WL++ AP F+ + K+ +K+ K A+
Sbjct 1123 WVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLSTFKRNQKIDPLFDKYAD 1182
Query 61 NN 62
N
Sbjct 1183 AN 1184
> mmu:71715 Dhx35, 1200009D07Rik, Ddx35; DEAH (Asp-Glu-Ala-His)
box polypeptide 35 (EC:3.6.1.-); K13117 ATP-dependent RNA
helicase DDX35 [EC:3.6.4.13]
Length=679
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 0/33 (0%)
Query 2 VVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFY 34
V+Y+E + TSK ++R T + WLL+ APHFY
Sbjct 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFY 661
> tgo:TGME49_060200 ATP-dependent RNA helicase, putative (EC:3.6.1.15
2.7.1.127); K12815 pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP16 [EC:3.6.4.13]
Length=1280
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 0/34 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFY 34
+VVYHE VLT+K ++R T V WL + P ++
Sbjct 1172 YVVYHEVVLTTKEYMRNVTSVEAAWLAELGPMYF 1205
> tpv:TP01_0544 RNA helicase
Length=910
Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 25/34 (73%), Gaps = 0/34 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFY 34
+V+YHE +LTSK ++R T ++ +WLL+ AP +
Sbjct 826 YVLYHELILTSKEYMRDLTVIKSKWLLELAPTMF 859
> ath:AT5G13010 EMB3011 (embryo defective 3011); ATP binding /
RNA helicase/ helicase/ nucleic acid binding; K12815 pre-mRNA-splicing
factor ATP-dependent RNA helicase PRP16 [EC:3.6.4.13]
Length=1226
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 0/34 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFY 34
+VVYHE +LT+K +++ T V WL + P F+
Sbjct 1118 YVVYHELILTTKEYMQCATSVEPHWLAELGPMFF 1151
> cel:K03H1.2 mog-1; Masculinisation Of Germline family member
(mog-1); K12815 pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16 [EC:3.6.4.13]
Length=1131
Score = 38.5 bits (88), Expect = 0.005, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 0/59 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFYDPEEFPPGDARKQLEKLKNKLQKEA 59
+VVYHE ++T+K +++ T V WL + P FY +E ++E ++ EA
Sbjct 1026 YVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKELKMESVRTVETMEA 1084
> ath:AT4G18465 RNA helicase, putative; K13117 ATP-dependent RNA
helicase DDX35 [EC:3.6.4.13]
Length=704
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 0/34 (0%)
Query 1 WVVYHEFVLTSKAFIRTCTQVRGEWLLQQAPHFY 34
WVVY V T + ++R + WL + APHFY
Sbjct 662 WVVYQSIVSTERQYMRNVVTINPSWLTEVAPHFY 695
Lambda K H
0.306 0.116 0.330
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2003209916
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40