bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
164,496 sequences; 82,071,388 total letters
Query= Eace_3360_orf1
Length=152
Score E
Sequences producing significant alignments: (Bits) Value
tgo:TGME49_089680 Ras family domain-containing protein (EC:3.1... 290 9e-79
cpv:cgd4_320 Rab11 264 7e-71
pfa:PF13_0119 Rab11a; Rab11a, GTPase; K07976 Rab family, other 253 2e-67
dre:492487 rab11a, wu:fi15h09, zgc:103679; RAB11a, member RAS ... 245 4e-65
mmu:53869 Rab11a; RAB11a, member RAS oncogene family; K07904 R... 245 4e-65
hsa:8766 RAB11A, MGC1490, YL8; RAB11A, member RAS oncogene fam... 245 4e-65
xla:494642 hypothetical LOC494642; K07905 Ras-related protein ... 245 4e-65
xla:496163 rab11b.2; RAB11B, member RAS oncogene family, gene ... 245 5e-65
dre:436828 zgc:92772; K07905 Ras-related protein Rab-11B 245 5e-65
hsa:9230 RAB11B, H-YPT3, MGC133246; RAB11B, member RAS oncogen... 244 5e-65
mmu:19326 Rab11b, A730055L17Rik; RAB11B, member RAS oncogene f... 244 6e-65
dre:386994 fc54g10, wu:fc54g10; zgc:63565; K07904 Ras-related ... 244 6e-65
xla:379824 rab11b.1, MGC52793, MGC85466, rab11b; RAB11B, membe... 243 1e-64
cel:F53G12.1 rab-11.1; RAB family member (rab-11.1); K07904 Ra... 243 3e-64
xla:447589 rab11a, MGC84419, rab11; RAB11A, member RAS oncogen... 242 3e-64
dre:406798 rab11b, wu:fb07g11, zgc:55760; RAB11B, member RAS o... 242 3e-64
ath:AT3G15060 AtRABA1g (Arabidopsis Rab GTPase homolog A1g); G... 241 8e-64
ath:AT5G60860 AtRABA1f (Arabidopsis Rab GTPase homolog A1f); G... 239 2e-63
ath:AT4G18430 AtRABA1e (Arabidopsis Rab GTPase homolog A1e); G... 238 5e-63
ath:AT4G18800 ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D); G... 237 1e-62
ath:AT5G45750 AtRABA1c (Arabidopsis Rab GTPase homolog A1c); G... 235 4e-62
ath:AT1G16920 ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B); G... 233 3e-61
ath:AT1G09630 ATRAB11C (ARABIDOPSIS RAB GTPASE 11C); GTP bindi... 231 5e-61
ath:AT1G06400 ARA-2; ARA-2; GTP binding; K07976 Rab family, other 231 7e-61
ath:AT1G07410 ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B); G... 230 2e-60
ath:AT3G46830 ATRABA2C (ARABIDOPSIS RAB GTPASE HOMOLOG A2C); G... 229 3e-60
ath:AT1G28550 AtRABA1i (Arabidopsis Rab GTPase homolog A1i); G... 228 5e-60
ath:AT5G59150 ATRABA2D (HOARABIDOPSIS RAB GTPASE HOMOLOG A2D);... 225 5e-59
ath:AT2G33870 ArRABA1h (Arabidopsis Rab GTPase homolog A1h); G... 224 9e-59
sce:YGL210W YPT32; GTPase of the Ypt/Rab family, very similar ... 215 5e-56
sce:YER031C YPT31, YPT8; GTPase of the Ypt/Rab family, very si... 214 7e-56
ath:AT5G47960 ATRABA4C; GTP binding; K07976 Rab family, other 209 4e-54
bbo:BBOV_IV006550 23.m06035; ras-related protein Rab11A; K0797... 208 4e-54
dre:574424 zgc:112037; K07906 Ras-related protein Rab-25 208 6e-54
dre:494098 rab25, si:dkeyp-84f11.7, zgc:101648; RAB25, member ... 206 2e-53
tpv:TP01_1204 hypothetical protein; K07976 Rab family, other 204 7e-53
ath:AT3G12160 RABA4D; RABA4D (RAB GTPASE HOMOLOG A4D); GTP bin... 202 3e-52
ath:AT4G39990 RABA4B; RABA4B (RAB GTPASE HOMOLOG A4B); GTP bin... 202 3e-52
xla:444652 rab25, MGC84182; RAB25, member RAS oncogene family;... 199 3e-51
ath:AT5G65270 AtRABA4a (Arabidopsis Rab GTPase homolog A4a); G... 199 3e-51
xla:734934 hypothetical protein MGC131054 198 7e-51
mmu:53868 Rab25, AV012978; RAB25, member RAS oncogene family; ... 196 3e-50
hsa:57111 RAB25, CATX-8, RAB11C; RAB25, member RAS oncogene fa... 195 4e-50
ath:AT5G47520 AtRABA5a (Arabidopsis Rab GTPase homolog A5a); G... 194 1e-49
cel:W04G5.2 rab-11.2; RAB family member (rab-11.2); K07904 Ras... 191 6e-49
ath:AT2G31680 AtRABA5d (Arabidopsis Rab GTPase homolog A5d); G... 190 1e-48
ath:AT1G73640 AtRABA6a (Arabidopsis Rab GTPase homolog A6a); G... 189 3e-48
ath:AT2G43130 ARA4; ARA4; GTP binding / GTPase/ protein bindin... 189 4e-48
ath:AT1G05810 RABA5E; RABA5E (RAB GTPASE HOMOLOG A5E); GTP bin... 189 4e-48
ath:AT3G07410 AtRABA5b (Arabidopsis Rab GTPase homolog A5b); G... 187 1e-47
> tgo:TGME49_089680 Ras family domain-containing protein (EC:3.1.4.12);
K07976 Rab family, other
Length=219
Score = 290 bits (743), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 139/146 (95%), Positives = 144/146 (98%), Gaps = 0/146 (0%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M+ KD+YYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV
Sbjct 1 MAAKDEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 60
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KRQSFENVERWLKELRDHADPNIVI
Sbjct 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVI 120
Query 127 LLVGNKSDLRHLRAVSPEEATRFANR 152
LLVGNKSDL+HLRAVS EEAT+FANR
Sbjct 121 LLVGNKSDLKHLRAVSVEEATKFANR 146
> cpv:cgd4_320 Rab11
Length=220
Score = 264 bits (675), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 128/146 (87%), Positives = 137/146 (93%), Gaps = 1/146 (0%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
MS KD++YDYLYKIVLIGDSGVGKSN+LSRFTRDEFNLESKSTIGVEFATKS+ + EGKV
Sbjct 1 MSSKDEHYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSI-ITEGKV 59
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKR SFENVERWLKELRDHADPNIV+
Sbjct 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVV 119
Query 127 LLVGNKSDLRHLRAVSPEEATRFANR 152
LLVGNKSDLR+LR V+ EEA F+ R
Sbjct 120 LLVGNKSDLRNLRTVTQEEACAFSER 145
> pfa:PF13_0119 Rab11a; Rab11a, GTPase; K07976 Rab family, other
Length=216
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 117/146 (80%), Positives = 135/146 (92%), Gaps = 0/146 (0%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M+ K+DYYDYL+KIVLIGDSGVGKSN+LSRFTRDEFNLESKSTIGVEFATKS+ L K+
Sbjct 1 MAMKEDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKI 60
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K+ SFEN+E+WLKELRD+AD NIVI
Sbjct 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVI 120
Query 127 LLVGNKSDLRHLRAVSPEEATRFANR 152
LLVGNKSDL+HLR ++ +AT++A +
Sbjct 121 LLVGNKSDLKHLRVINDNDATQYAKK 146
> dre:492487 rab11a, wu:fi15h09, zgc:103679; RAB11a, member RAS
oncogene family; K07904 Ras-related protein Rab-11A
Length=215
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 117/146 (80%), Positives = 132/146 (90%), Gaps = 1/146 (0%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M +DD YDYL+K+VLIGDSGVGKSN+LSRFTR+EFNLESKSTIGVEFAT+S+ +D GK
Sbjct 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD-GKT 59
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++ENVERWLKELRDHAD NIVI
Sbjct 60 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVI 119
Query 127 LLVGNKSDLRHLRAVSPEEATRFANR 152
+LVGNKSDLRHLRAV +EA FA +
Sbjct 120 MLVGNKSDLRHLRAVPTDEARAFAEK 145
> mmu:53869 Rab11a; RAB11a, member RAS oncogene family; K07904
Ras-related protein Rab-11A
Length=216
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 118/146 (80%), Positives = 132/146 (90%), Gaps = 1/146 (0%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M +DD YDYL+K+VLIGDSGVGKSN+LSRFTR+EFNLESKSTIGVEFAT+S+ +D GK
Sbjct 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD-GKT 59
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++ENVERWLKELRDHAD NIVI
Sbjct 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVI 119
Query 127 LLVGNKSDLRHLRAVSPEEATRFANR 152
+LVGNKSDLRHLRAV +EA FA +
Sbjct 120 MLVGNKSDLRHLRAVPTDEARAFAEK 145
> hsa:8766 RAB11A, MGC1490, YL8; RAB11A, member RAS oncogene family;
K07904 Ras-related protein Rab-11A
Length=216
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 118/146 (80%), Positives = 132/146 (90%), Gaps = 1/146 (0%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M +DD YDYL+K+VLIGDSGVGKSN+LSRFTR+EFNLESKSTIGVEFAT+S+ +D GK
Sbjct 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD-GKT 59
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++ENVERWLKELRDHAD NIVI
Sbjct 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVI 119
Query 127 LLVGNKSDLRHLRAVSPEEATRFANR 152
+LVGNKSDLRHLRAV +EA FA +
Sbjct 120 MLVGNKSDLRHLRAVPTDEARAFAEK 145
> xla:494642 hypothetical LOC494642; K07905 Ras-related protein
Rab-11B
Length=218
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 118/146 (80%), Positives = 132/146 (90%), Gaps = 1/146 (0%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M +DD YDYL+K+VLIGDSGVGKSN+LSRFTR+EFNLESKSTIGVEFAT+S+ +D GK
Sbjct 1 MGARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD-GKT 59
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++ENVERWLKELRDHAD NIVI
Sbjct 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI 119
Query 127 LLVGNKSDLRHLRAVSPEEATRFANR 152
+LVGNKSDLRHLRAV +EA FA +
Sbjct 120 MLVGNKSDLRHLRAVPTDEARAFAEK 145
> xla:496163 rab11b.2; RAB11B, member RAS oncogene family, gene
2; K07905 Ras-related protein Rab-11B
Length=218
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 118/146 (80%), Positives = 132/146 (90%), Gaps = 1/146 (0%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M +DD YDYL+K+VLIGDSGVGKSN+LSRFTR+EFNLESKSTIGVEFAT+S+ +D GK
Sbjct 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD-GKT 59
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++ENVERWLKELRDHAD NIVI
Sbjct 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI 119
Query 127 LLVGNKSDLRHLRAVSPEEATRFANR 152
+LVGNKSDLRHLRAV +EA FA +
Sbjct 120 MLVGNKSDLRHLRAVPTDEARAFAEK 145
> dre:436828 zgc:92772; K07905 Ras-related protein Rab-11B
Length=218
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 117/146 (80%), Positives = 133/146 (91%), Gaps = 1/146 (0%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M+ +DD YD+L+K+VLIGDSGVGKSN+LSRFTR+EFNLESKSTIGVEFAT+S+ +D GK
Sbjct 1 MANRDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD-GKT 59
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++ENVERWLKELRDHAD NIVI
Sbjct 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI 119
Query 127 LLVGNKSDLRHLRAVSPEEATRFANR 152
+LVGNKSDLRHLRAV +EA FA +
Sbjct 120 MLVGNKSDLRHLRAVPTDEARAFAEK 145
> hsa:9230 RAB11B, H-YPT3, MGC133246; RAB11B, member RAS oncogene
family; K07905 Ras-related protein Rab-11B
Length=218
Score = 244 bits (624), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 118/146 (80%), Positives = 132/146 (90%), Gaps = 1/146 (0%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M +DD YDYL+K+VLIGDSGVGKSN+LSRFTR+EFNLESKSTIGVEFAT+S+ +D GK
Sbjct 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD-GKT 59
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++ENVERWLKELRDHAD NIVI
Sbjct 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVI 119
Query 127 LLVGNKSDLRHLRAVSPEEATRFANR 152
+LVGNKSDLRHLRAV +EA FA +
Sbjct 120 MLVGNKSDLRHLRAVPTDEARAFAEK 145
> mmu:19326 Rab11b, A730055L17Rik; RAB11B, member RAS oncogene
family; K07905 Ras-related protein Rab-11B
Length=218
Score = 244 bits (624), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 118/146 (80%), Positives = 132/146 (90%), Gaps = 1/146 (0%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M +DD YDYL+K+VLIGDSGVGKSN+LSRFTR+EFNLESKSTIGVEFAT+S+ +D GK
Sbjct 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD-GKT 59
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++ENVERWLKELRDHAD NIVI
Sbjct 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVI 119
Query 127 LLVGNKSDLRHLRAVSPEEATRFANR 152
+LVGNKSDLRHLRAV +EA FA +
Sbjct 120 MLVGNKSDLRHLRAVPTDEARAFAEK 145
> dre:386994 fc54g10, wu:fc54g10; zgc:63565; K07904 Ras-related
protein Rab-11A
Length=216
Score = 244 bits (624), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 115/146 (78%), Positives = 134/146 (91%), Gaps = 1/146 (0%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M+G++D YDYL+K+VLIGDSGVGKSN+LSRFTR+EFNLESKSTIGVEFAT+S+++ EGK
Sbjct 1 MTGREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHV-EGKT 59
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++EN ERWLKEL+DHAD NIVI
Sbjct 60 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVI 119
Query 127 LLVGNKSDLRHLRAVSPEEATRFANR 152
+LVGNKSDLRHLRAV +EA FA +
Sbjct 120 MLVGNKSDLRHLRAVPMDEAKAFAEK 145
> xla:379824 rab11b.1, MGC52793, MGC85466, rab11b; RAB11B, member
RAS oncogene family, gene 1; K07905 Ras-related protein
Rab-11B
Length=218
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/146 (80%), Positives = 131/146 (89%), Gaps = 1/146 (0%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M +DD YDYL+K+VLIGDSGVGKSN+LSRFTR+EFNLESKSTIGVEFAT+S+ +D GK
Sbjct 1 MGARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD-GKT 59
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
IKAQIWDTAGQERYRAITSAYYRG VGALLVYDI+K ++ENVERWLKELRDHAD NIVI
Sbjct 60 IKAQIWDTAGQERYRAITSAYYRGVVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI 119
Query 127 LLVGNKSDLRHLRAVSPEEATRFANR 152
+LVGNKSDLRHLRAV +EA FA +
Sbjct 120 MLVGNKSDLRHLRAVPTDEARAFAEK 145
> cel:F53G12.1 rab-11.1; RAB family member (rab-11.1); K07904
Ras-related protein Rab-11A
Length=211
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/146 (80%), Positives = 132/146 (90%), Gaps = 1/146 (0%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M +DD YDYL+K+VLIGDSGVGKSN+LSRFTR+EFNLESKSTIGVEFAT+S+ + EGK
Sbjct 1 MGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV-EGKT 59
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++ENVERWLKELRDHAD NIVI
Sbjct 60 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVI 119
Query 127 LLVGNKSDLRHLRAVSPEEATRFANR 152
+LVGNKSDLRHLRAV +EA +A R
Sbjct 120 MLVGNKSDLRHLRAVPTDEAKIYAER 145
> xla:447589 rab11a, MGC84419, rab11; RAB11A, member RAS oncogene
family; K07904 Ras-related protein Rab-11A
Length=216
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/146 (80%), Positives = 131/146 (89%), Gaps = 1/146 (0%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M +DD YDYL+K+VLIGDSGVGKSN+LSRFTR+EFNLESKSTIGVEFAT+S+ +D GK
Sbjct 1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD-GKT 59
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++ENVERWLKELRDHAD IVI
Sbjct 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNKIVI 119
Query 127 LLVGNKSDLRHLRAVSPEEATRFANR 152
+LVGNKSDLRHLRAV +EA FA +
Sbjct 120 MLVGNKSDLRHLRAVPTDEARAFAEK 145
> dre:406798 rab11b, wu:fb07g11, zgc:55760; RAB11B, member RAS
oncogene family; K07905 Ras-related protein Rab-11B
Length=218
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/146 (80%), Positives = 132/146 (90%), Gaps = 1/146 (0%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M +DD YDYL+++VLIGDSGVGKSN+LSRFTR+EFNLESKSTIGVEFAT+S+ +D GK
Sbjct 1 MGTRDDEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD-GKT 59
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+K ++ENVERWLKELRDHAD NIVI
Sbjct 60 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVI 119
Query 127 LLVGNKSDLRHLRAVSPEEATRFANR 152
+LVGNKSDLRHLRAV +EA FA +
Sbjct 120 MLVGNKSDLRHLRAVPTDEARAFAEK 145
> ath:AT3G15060 AtRABA1g (Arabidopsis Rab GTPase homolog A1g);
GTP binding; K07976 Rab family, other
Length=217
Score = 241 bits (614), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 113/142 (79%), Positives = 132/142 (92%), Gaps = 1/142 (0%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
DD YD+LYK+VLIGDSGVGKSN+LSRFTR+EF+LESKSTIGVEFAT+S+++DE K++KAQ
Sbjct 7 DDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDE-KIVKAQ 65
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ +FENVERWLKELRDH + NIVI+LVG
Sbjct 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVG 125
Query 131 NKSDLRHLRAVSPEEATRFANR 152
NK+DLRHLRAVS E+A FA R
Sbjct 126 NKADLRHLRAVSTEDAKAFAER 147
> ath:AT5G60860 AtRABA1f (Arabidopsis Rab GTPase homolog A1f);
GTP binding; K07976 Rab family, other
Length=217
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 112/142 (78%), Positives = 131/142 (92%), Gaps = 1/142 (0%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
DD YDYL+K+VLIGDSGVGKSN+LSRFTR+EF+LESKSTIGVEFAT+S+++D+ K++KAQ
Sbjct 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD-KIVKAQ 65
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ +FENVERWLKELRDH D NIVI+ VG
Sbjct 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVG 125
Query 131 NKSDLRHLRAVSPEEATRFANR 152
NK+DLRHLRAVS E+A FA R
Sbjct 126 NKADLRHLRAVSTEDAKAFAER 147
> ath:AT4G18430 AtRABA1e (Arabidopsis Rab GTPase homolog A1e);
GTP binding; K07976 Rab family, other
Length=217
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 113/142 (79%), Positives = 131/142 (92%), Gaps = 1/142 (0%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
DD YDYL+K+VLIGDSGVGKSN+LSRFTR+EF++ESKSTIGVEFAT+SV++DE K+IKAQ
Sbjct 7 DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDE-KIIKAQ 65
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
+WDTAGQERYRAITSAYYRGAVGALLVYDI++ +FENVERWLKELRDH D N+VI+LVG
Sbjct 66 LWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVG 125
Query 131 NKSDLRHLRAVSPEEATRFANR 152
NK+DLRHLRAV EEA F+ R
Sbjct 126 NKADLRHLRAVPTEEARSFSER 147
> ath:AT4G18800 ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D);
GTP binding; K07976 Rab family, other
Length=214
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/140 (80%), Positives = 129/140 (92%), Gaps = 1/140 (0%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
DD YDYL+K+VLIGDSGVGKSN+LSRFTR+EF+LESKSTIGVEFAT+S+ ++E KVIKAQ
Sbjct 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNE-KVIKAQ 65
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ +FENVERWL+ELRDH DPNIV++LVG
Sbjct 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVG 125
Query 131 NKSDLRHLRAVSPEEATRFA 150
NKSDLRHL AV E+A FA
Sbjct 126 NKSDLRHLVAVQTEDAKSFA 145
> ath:AT5G45750 AtRABA1c (Arabidopsis Rab GTPase homolog A1c);
GTP binding; K07976 Rab family, other
Length=216
Score = 235 bits (599), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 110/142 (77%), Positives = 129/142 (90%), Gaps = 1/142 (0%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
DD YDYL+K+VLIGDSGVGKSN+LSRFT++EF+LESKSTIGVEFAT+S+ +D+ KVIKAQ
Sbjct 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDD-KVIKAQ 65
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ +FENVE WLKELR+H DPNIV++LVG
Sbjct 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVG 125
Query 131 NKSDLRHLRAVSPEEATRFANR 152
NKSDLRHL AV E+A FA +
Sbjct 126 NKSDLRHLVAVQTEDAKSFAEK 147
> ath:AT1G16920 ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B);
GTP binding; K07976 Rab family, other
Length=216
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 107/142 (75%), Positives = 130/142 (91%), Gaps = 1/142 (0%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
+D YDYL+K+VLIGDSGVGKSN+LSRFT++EFNLESKSTIGVEFAT+++ +D GKV+KAQ
Sbjct 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVD-GKVVKAQ 65
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
IWDTAGQERYRAITSAYYRGAVGALLVYD+++R +FENV+RWLKEL++H DPNIV++LVG
Sbjct 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVG 125
Query 131 NKSDLRHLRAVSPEEATRFANR 152
NKSDLRHL AV E+ +A +
Sbjct 126 NKSDLRHLLAVPTEDGKSYAEQ 147
> ath:AT1G09630 ATRAB11C (ARABIDOPSIS RAB GTPASE 11C); GTP binding;
K07976 Rab family, other
Length=217
Score = 231 bits (590), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 106/142 (74%), Positives = 129/142 (90%), Gaps = 1/142 (0%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
D+ YDYL+K+VLIGDSGVGKSN+LSRFTR+EF LESKSTIGVEFAT+++ + EG+ +KAQ
Sbjct 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV-EGRTVKAQ 64
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
IWDTAGQERYRAITSAYYRGA+GALLVYD++K +FENV RWLKELRDHAD NIVI+L+G
Sbjct 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIG 124
Query 131 NKSDLRHLRAVSPEEATRFANR 152
NK+DL+HLRAV+ E+A +A +
Sbjct 125 NKTDLKHLRAVATEDAQSYAEK 146
> ath:AT1G06400 ARA-2; ARA-2; GTP binding; K07976 Rab family,
other
Length=216
Score = 231 bits (589), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 107/142 (75%), Positives = 125/142 (88%), Gaps = 1/142 (0%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
D+ YDYL+K+VLIGDSGVGKSN+LSRFT++EFNLESKSTIGVEFATK+ + EGKV+KAQ
Sbjct 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKV-EGKVVKAQ 65
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
IWDTAGQERYRAITSAYYRGAVGALL+YD+++ +FEN RWL+ELR H DPNIV++L+G
Sbjct 66 IWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIG 125
Query 131 NKSDLRHLRAVSPEEATRFANR 152
NK DLRHL AV EEA FA R
Sbjct 126 NKCDLRHLVAVKTEEAKAFAER 147
> ath:AT1G07410 ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B);
GTP binding / GTPase/ protein binding; K07976 Rab family, other
Length=214
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/142 (76%), Positives = 126/142 (88%), Gaps = 1/142 (0%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
D YDYL+KIVLIGDSGVGKSN+LSRFTR+EF LESKSTIGVEFAT+++ + EGK +KAQ
Sbjct 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV-EGKTVKAQ 64
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
IWDTAGQERYRAITSAYYRGAVGALLVYDI+KRQ+FENV RWL+ELRDHAD NIVI++ G
Sbjct 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAG 124
Query 131 NKSDLRHLRAVSPEEATRFANR 152
NKSDL HLR+V+ E+ A +
Sbjct 125 NKSDLNHLRSVADEDGRSLAEK 146
> ath:AT3G46830 ATRABA2C (ARABIDOPSIS RAB GTPASE HOMOLOG A2C);
GTP binding; K07976 Rab family, other
Length=217
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/142 (76%), Positives = 125/142 (88%), Gaps = 1/142 (0%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
D YDYL+KIVLIGDSGVGKSN+LSRFTR+EF LESKSTIGVEFAT++ + EGK IKAQ
Sbjct 6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQV-EGKTIKAQ 64
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
IWDTAGQERYRAITSAYYRGAVGALLVYDI+KRQ+F+NV RWL+ELRDHAD NIVI++ G
Sbjct 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAG 124
Query 131 NKSDLRHLRAVSPEEATRFANR 152
NKSDL HLR+V+ E+ A +
Sbjct 125 NKSDLNHLRSVAEEDGQSLAEK 146
> ath:AT1G28550 AtRABA1i (Arabidopsis Rab GTPase homolog A1i);
GTP binding; K07976 Rab family, other
Length=218
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 106/142 (74%), Positives = 128/142 (90%), Gaps = 1/142 (0%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
+D YDYL+K+VL GDSGVGKSN+LSRFTR++F+ +S++TIGVEFAT+S+ D+ K++KAQ
Sbjct 7 EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDD-KIVKAQ 65
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ +FENVERWLKELRDH D NIVI+LVG
Sbjct 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVG 125
Query 131 NKSDLRHLRAVSPEEATRFANR 152
NK+DLRHLRA+S EEA FA R
Sbjct 126 NKADLRHLRAISTEEAKAFAER 147
> ath:AT5G59150 ATRABA2D (HOARABIDOPSIS RAB GTPASE HOMOLOG A2D);
GTP binding; K07976 Rab family, other
Length=217
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 105/137 (76%), Positives = 124/137 (90%), Gaps = 1/137 (0%)
Query 14 YDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWD 73
YDYL+KIVLIGDSGVGK+N+LSRFTR+EF LESKSTIGVEFAT+++ + EGK +KAQIWD
Sbjct 9 YDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQV-EGKTVKAQIWD 67
Query 74 TAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVGNKS 133
TAGQERYRAITSAYYRGAVGALLVYDI+KRQ+F+NV RWL+ELRDHAD NIVI++ GNK+
Sbjct 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKA 127
Query 134 DLRHLRAVSPEEATRFA 150
DL HLR+V+ E+ A
Sbjct 128 DLNHLRSVAEEDGQTLA 144
> ath:AT2G33870 ArRABA1h (Arabidopsis Rab GTPase homolog A1h);
GTP binding; K07976 Rab family, other
Length=218
Score = 224 bits (571), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 104/142 (73%), Positives = 126/142 (88%), Gaps = 1/142 (0%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
+D YDYL+K+VL GDSGVGKSN+LSRFTR++F+ +S+STIGVEFAT+S+ +D+ K++KAQ
Sbjct 7 EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDD-KIVKAQ 65
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ +FENVERWLKELRDH D N VI+LVG
Sbjct 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVG 125
Query 131 NKSDLRHLRAVSPEEATRFANR 152
NK+DL HLRA+S EE FA R
Sbjct 126 NKADLNHLRAISTEEVKDFAER 147
> sce:YGL210W YPT32; GTPase of the Ypt/Rab family, very similar
to Ypt31p; involved in the exocytic pathway; mediates intra-Golgi
traffic or the budding of post-Golgi vesicles from the
trans-Golgi; K07976 Rab family, other
Length=222
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 103/137 (75%), Positives = 118/137 (86%), Gaps = 1/137 (0%)
Query 14 YDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWD 73
YDYL+KIVLIGDSGVGKSN+LSRFT DEFN+ESKSTIGVEFAT+++ + E K IKAQIWD
Sbjct 10 YDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEV-ENKKIKAQIWD 68
Query 74 TAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVGNKS 133
TAGQERYRAITSAYYRGAVGAL+VYDISK S+EN WL ELR++AD N+ + L+GNKS
Sbjct 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query 134 DLRHLRAVSPEEATRFA 150
DL HLRAV +EA FA
Sbjct 129 DLAHLRAVPTDEAKNFA 145
> sce:YER031C YPT31, YPT8; GTPase of the Ypt/Rab family, very
similar to Ypt32p; involved in the exocytic pathway; mediates
intra-Golgi traffic or the budding of post-Golgi vesicles
from the trans-Golgi; K07976 Rab family, other
Length=223
Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 105/146 (71%), Positives = 124/146 (84%), Gaps = 3/146 (2%)
Query 7 MSGKDDYYDY--LYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEG 64
MS +D YDY L+KIVLIGDSGVGKSN+LSRFT++EFN++SKSTIGVEFAT+++ +D G
Sbjct 1 MSSEDYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEID-G 59
Query 65 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNI 124
K IKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDISK S+EN WL ELR++AD N+
Sbjct 60 KRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNV 119
Query 125 VILLVGNKSDLRHLRAVSPEEATRFA 150
+ L+GNKSDL HLRAV EE+ FA
Sbjct 120 AVGLIGNKSDLAHLRAVPTEESKTFA 145
> ath:AT5G47960 ATRABA4C; GTP binding; K07976 Rab family, other
Length=223
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 97/138 (70%), Positives = 121/138 (87%), Gaps = 1/138 (0%)
Query 15 DYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDT 74
DY++K+VLIGDS VGKS +L+RF+R+EF++ESK+TIGVEF T+++ +D K IKAQIWDT
Sbjct 13 DYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDR-KTIKAQIWDT 71
Query 75 AGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVGNKSD 134
AGQERYRA+TSAYYRGAVGA+LVYDI+KRQSF++V RWL+ELR HAD NIVI+L+GNK+D
Sbjct 72 AGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTD 131
Query 135 LRHLRAVSPEEATRFANR 152
L LRAV E+A FA R
Sbjct 132 LGTLRAVPTEDAKEFAQR 149
> bbo:BBOV_IV006550 23.m06035; ras-related protein Rab11A; K07976
Rab family, other
Length=212
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 114/140 (81%), Gaps = 0/140 (0%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
D YDYL+KIVLIGDS VGKSN+L RF + F L+SKSTIGVEFATK+V L+ GK+ KAQ
Sbjct 4 DQSYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKTVTLNNGKIAKAQ 63
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
IWDTAGQERYRAITSAYYRGA+GA++VYDI+ + SF NV +WL EL D+AD NI I LVG
Sbjct 64 IWDTAGQERYRAITSAYYRGAMGAIIVYDIACKTSFTNVSKWLTELHDYADSNITICLVG 123
Query 131 NKSDLRHLRAVSPEEATRFA 150
NKSDL HLR V+ E+ FA
Sbjct 124 NKSDLTHLREVNKEDGEAFA 143
> dre:574424 zgc:112037; K07906 Ras-related protein Rab-25
Length=210
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 97/144 (67%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
Query 9 GKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIK 68
G D+ Y++++K+VLIG+SGVGKSN+LSRFT++EF+ +S++TIGVEF+T++V L+ G IK
Sbjct 2 GSDEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLN-GLTIK 60
Query 69 AQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILL 128
AQIWDTAG ERYRAITSAYYRGAVGALLVYDISK ++E+ ERWLKEL DHADP+IV++L
Sbjct 61 AQIWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVML 120
Query 129 VGNKSDLRHLRAVSPEEATRFANR 152
VGNKSDL +R+V E+A FA +
Sbjct 121 VGNKSDLAAVRSVPTEDAKDFAEK 144
> dre:494098 rab25, si:dkeyp-84f11.7, zgc:101648; RAB25, member
RAS oncogene family
Length=210
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/143 (68%), Positives = 123/143 (86%), Gaps = 1/143 (0%)
Query 9 GKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIK 68
G D Y++++K+VLIG+SGVGKSN+LSRFT++EFN +S++TIGVEF+T+SV +D IK
Sbjct 2 GTDLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDS-ITIK 60
Query 69 AQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILL 128
AQIWDTAG ERYRAITSAYYRGAVGALLVYDI+K ++E+VERWLKEL DHADP+IV++L
Sbjct 61 AQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVML 120
Query 129 VGNKSDLRHLRAVSPEEATRFAN 151
VGNK+DL +R V EEA FA+
Sbjct 121 VGNKNDLATVRTVPTEEAKDFAD 143
> tpv:TP01_1204 hypothetical protein; K07976 Rab family, other
Length=212
Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 114/140 (81%), Gaps = 0/140 (0%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
D YDYL+KIVLIGDS VGKSN+L RF + F L+SKSTIGVEFATK+V L GKV KAQ
Sbjct 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLRNGKVAKAQ 63
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
IWDTAGQERYRAITSAYYRGA GA++VYDI+ +QSF NV RWL EL ++ D N++I LVG
Sbjct 64 IWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDANMIIALVG 123
Query 131 NKSDLRHLRAVSPEEATRFA 150
NKSDL HLR V+ E+ R+A
Sbjct 124 NKSDLTHLREVTYEDGERYA 143
> ath:AT3G12160 RABA4D; RABA4D (RAB GTPASE HOMOLOG A4D); GTP binding;
K07976 Rab family, other
Length=222
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 92/138 (66%), Positives = 119/138 (86%), Gaps = 1/138 (0%)
Query 15 DYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDT 74
DY++K+VLIGDS VGK+ +L+RF R+EF+++SK+TIGVEF TK++ +D K +KAQIWDT
Sbjct 13 DYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDN-KTVKAQIWDT 71
Query 75 AGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVGNKSD 134
AGQERYRA+TSAYYRGAVGA+LVYD++KRQSF+++ +WL+ELR HAD NIVI+L+GNK D
Sbjct 72 AGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCD 131
Query 135 LRHLRAVSPEEATRFANR 152
L LRAV E+A FA R
Sbjct 132 LGSLRAVPTEDAQEFAQR 149
> ath:AT4G39990 RABA4B; RABA4B (RAB GTPASE HOMOLOG A4B); GTP binding;
K07976 Rab family, other
Length=224
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 92/138 (66%), Positives = 120/138 (86%), Gaps = 1/138 (0%)
Query 15 DYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDT 74
DY++K+VLIGDS VGKS +L+RF RDEF+++SK+TIGVEF T+++ +++ K IKAQIWDT
Sbjct 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQ-KSIKAQIWDT 73
Query 75 AGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVGNKSD 134
AGQERYRA+TSAYYRGAVGA+LVYD++KR++FE++ RWL+ELR HAD NIVI+L+GNKSD
Sbjct 74 AGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSD 133
Query 135 LRHLRAVSPEEATRFANR 152
L RAV E+A FA +
Sbjct 134 LEDQRAVPTEDAKEFAEK 151
> xla:444652 rab25, MGC84182; RAB25, member RAS oncogene family;
K07906 Ras-related protein Rab-25
Length=216
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 127/147 (86%), Gaps = 2/147 (1%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M +++ +++++K+VLIG+SGVGK+N+LSRFTR+EFN +S++TIGVEF+T+++ +D G +
Sbjct 1 MGSEEEDFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTID-GHL 59
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
+K+QIWDTAG ERYRAITSAYYRGAVGALLVYDI+K QS+E+V+RWLKEL DHAD +IV+
Sbjct 60 VKSQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVV 119
Query 127 LLVGNKSDLR-HLRAVSPEEATRFANR 152
+LVGNKSDL+ + V EEA +A R
Sbjct 120 MLVGNKSDLKDEAQEVPSEEAKAYAER 146
> ath:AT5G65270 AtRABA4a (Arabidopsis Rab GTPase homolog A4a);
GTP binding; K07976 Rab family, other
Length=226
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 91/138 (65%), Positives = 119/138 (86%), Gaps = 1/138 (0%)
Query 15 DYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDT 74
DY++K+VLIGDS VGKS +L+R+ RDEF+L+SK+TIGVEF T+++ +D K +KAQIWDT
Sbjct 15 DYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDH-KSVKAQIWDT 73
Query 75 AGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVGNKSD 134
AGQERYRA+TSAYYRGAVGA+LVYDI++RQ+F+++ RWL+ELR HAD NIVI+L+GNKSD
Sbjct 74 AGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSD 133
Query 135 LRHLRAVSPEEATRFANR 152
L RA+ E+A FA +
Sbjct 134 LVDQRAIPTEDAKEFAEK 151
> xla:734934 hypothetical protein MGC131054
Length=216
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 91/147 (61%), Positives = 127/147 (86%), Gaps = 2/147 (1%)
Query 7 MSGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKV 66
M+ +++ +++++K+VLIG+SGVGK+N+LSRFTR+EF+ +S++TIGVEF+T+++ +D G +
Sbjct 1 MASEEEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTLTVD-GHL 59
Query 67 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVI 126
+K+QIWDTAG ERYRAITSAYYRGAVGALLVYDI+K QS+ENV+RWLKEL DHAD +IV+
Sbjct 60 VKSQIWDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYENVDRWLKELYDHADASIVV 119
Query 127 LLVGNKSDLR-HLRAVSPEEATRFANR 152
+LVGNK DL+ + V EEA +A +
Sbjct 120 MLVGNKCDLKDEAQEVPSEEAKAYAEQ 146
> mmu:53868 Rab25, AV012978; RAB25, member RAS oncogene family;
K07906 Ras-related protein Rab-25
Length=213
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 117/140 (83%), Gaps = 1/140 (0%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
D+ Y++++K+VLIG+SGVGK+N+LSRFTR+EF+ +S++TIGVEF+T++V L V KAQ
Sbjct 6 DEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV-KAQ 64
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
IWDTAG ERYRAITSAYYRGAVGALLV+D++K Q++ VERWLKEL DHA+ IV++LVG
Sbjct 65 IWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVG 124
Query 131 NKSDLRHLRAVSPEEATRFA 150
NKSDL R V EEA FA
Sbjct 125 NKSDLSQAREVPTEEACMFA 144
> hsa:57111 RAB25, CATX-8, RAB11C; RAB25, member RAS oncogene
family; K07906 Ras-related protein Rab-25
Length=213
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 92/143 (64%), Positives = 119/143 (83%), Gaps = 1/143 (0%)
Query 8 SGKDDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVI 67
+G ++ Y++++K+VLIG+SGVGK+N+LSRFTR+EF+ +S++TIGVEF+T++V L V
Sbjct 3 NGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV- 61
Query 68 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVIL 127
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D++K Q++ VERWLKEL DHA+ IV++
Sbjct 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query 128 LVGNKSDLRHLRAVSPEEATRFA 150
LVGNKSDL R V EEA FA
Sbjct 122 LVGNKSDLSQAREVPTEEARMFA 144
> ath:AT5G47520 AtRABA5a (Arabidopsis Rab GTPase homolog A5a);
GTP binding; K07976 Rab family, other
Length=221
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 112/140 (80%), Gaps = 1/140 (0%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
D DYL+KIVLIGDS VGKSN+L+RF RDEF SKSTIGVEF T+ + ++ GK IKAQ
Sbjct 8 DKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDIN-GKEIKAQ 66
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
IWDTAGQER+RA+TSAYYRGAVGALLVYDIS+RQ+F ++ RWL EL H+D N+V +LVG
Sbjct 67 IWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVG 126
Query 131 NKSDLRHLRAVSPEEATRFA 150
NKSDL+ LR VS E A
Sbjct 127 NKSDLKDLREVSTAEGKALA 146
> cel:W04G5.2 rab-11.2; RAB family member (rab-11.2); K07904 Ras-related
protein Rab-11A
Length=198
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/142 (67%), Positives = 118/142 (83%), Gaps = 4/142 (2%)
Query 11 DDYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 70
++YY YL+KIVLIG+ GVGKSN+LSRFTR+EFNL+SK TIGVEFATK + + EGK +K Q
Sbjct 3 NEYY-YLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISV-EGKAVKVQ 60
Query 71 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVG 130
IWDTAG ER+R S+YYRGA+GALLVYDISK +++E+VE+WLK LRDHA+ +IVI LVG
Sbjct 61 IWDTAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVG 120
Query 131 NKSDLRHLRAVSPEEATRFANR 152
NKSDL H AV +EA +A R
Sbjct 121 NKSDLSH--AVPTDEAKIYAER 140
> ath:AT2G31680 AtRABA5d (Arabidopsis Rab GTPase homolog A5d);
GTP binding; K07976 Rab family, other
Length=219
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/136 (65%), Positives = 112/136 (82%), Gaps = 1/136 (0%)
Query 15 DYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDT 74
+YL+KIV+IGDS VGKSN+LSR+ R+EFN SK+TIGVEF T+++ + EGK +KAQIWDT
Sbjct 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEI-EGKEVKAQIWDT 68
Query 75 AGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVGNKSD 134
AGQER+RA+TSAYYRGAVGAL+VYDIS+R +FE+V RWL EL+ H+D + +LVGNK D
Sbjct 69 AGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCD 128
Query 135 LRHLRAVSPEEATRFA 150
L +RAVS EE A
Sbjct 129 LESIRAVSVEEGKALA 144
> ath:AT1G73640 AtRABA6a (Arabidopsis Rab GTPase homolog A6a);
GTP binding; K07976 Rab family, other
Length=233
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/136 (64%), Positives = 114/136 (83%), Gaps = 1/136 (0%)
Query 15 DYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDT 74
DYL+K VLIGDS VGKSN+LSRF++DEF +SK TIGVEFA ++V++ + K+IKAQIWDT
Sbjct 11 DYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGD-KIIKAQIWDT 69
Query 75 AGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVGNKSD 134
AGQER+RAITS+YYRGA+GALL+YDI++R +F+N+++WL ELRD A+P V++LVGNKSD
Sbjct 70 AGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGNKSD 129
Query 135 LRHLRAVSPEEATRFA 150
LR R V +E A
Sbjct 130 LRQSREVEEDEGKTLA 145
> ath:AT2G43130 ARA4; ARA4; GTP binding / GTPase/ protein binding;
K07976 Rab family, other
Length=214
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 87/136 (63%), Positives = 110/136 (80%), Gaps = 1/136 (0%)
Query 15 DYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDT 74
+YL+KIV+IGDS VGKSN+L+R+ R+EFN SK+TIGVEF T+S+ +D GK +KAQIWDT
Sbjct 10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLID-GKEVKAQIWDT 68
Query 75 AGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIVILLVGNKSD 134
AGQER+RA+TSAYYRGAVGAL+VYDI++ +FENV RWL EL H+D + +L+GNK D
Sbjct 69 AGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCD 128
Query 135 LRHLRAVSPEEATRFA 150
L +RAVS EE A
Sbjct 129 LESIRAVSVEEGKSLA 144
> ath:AT1G05810 RABA5E; RABA5E (RAB GTPASE HOMOLOG A5E); GTP binding;
K07976 Rab family, other
Length=261
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 120/152 (78%), Gaps = 3/152 (1%)
Query 1 KRALEKMSGKDD--YYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKS 58
K+ +++ DD +YL+KIV+IGDS VGKSN+LSR+ R+EF+ SK+TIGVEF T+S
Sbjct 37 KKTVKRAMSSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQS 96
Query 59 VYLDEGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRD 118
+ + EGK +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDI++R +FE+V RWL EL+
Sbjct 97 MEI-EGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKI 155
Query 119 HADPNIVILLVGNKSDLRHLRAVSPEEATRFA 150
H+D + +LVGNK DL ++RAVS EE A
Sbjct 156 HSDTTVARMLVGNKCDLENIRAVSVEEGKALA 187
> ath:AT3G07410 AtRABA5b (Arabidopsis Rab GTPase homolog A5b);
GTP binding; K07976 Rab family, other
Length=217
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 114/145 (78%), Gaps = 2/145 (1%)
Query 7 MSGKDDY-YDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGK 65
M +DD +YL+KIVLIGDS VGKSN+LSRF+RDEF+ SK+TIGVEF T+ V + EGK
Sbjct 1 MGKEDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEI-EGK 59
Query 66 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQSFENVERWLKELRDHADPNIV 125
+KAQIWDTAGQER+RA+TSAYYRGA GAL+VYDI++ +FE+V+RWL+EL H D +
Sbjct 60 EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVA 119
Query 126 ILLVGNKSDLRHLRAVSPEEATRFA 150
+LVGNK DL +RAVS EE A
Sbjct 120 QMLVGNKCDLEDIRAVSVEEGKALA 144
Lambda K H
0.318 0.135 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3264639800
Database: egene_temp_file_orthology_annotation_similarity_blast_database_966
Posted date: Sep 16, 2011 8:45 PM
Number of letters in database: 82,071,388
Number of sequences in database: 164,496
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40