bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0008_orf1
Length=199
Score E
Sequences producing significant alignments: (Bits) Value
386656.YPDSF_2281 149 6e-35
> 386656.YPDSF_2281
Length=871
Score = 149 bits (375), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 110/179 (61%), Gaps = 21/179 (11%)
Query 21 RPGEKFRDEYKPSDFAVDSVDLDFFLEETNTKVIATIIMQRTIGTSPTDLVLNGEELDLV 80
+P K+R +Y+ D+ + +DLDF L+ T V A ++R GT T L+LNGE+L L+
Sbjct 4 QPQAKYRHDYRAPDYTITDIDLDFALDAQKTTVTAVSKVKRQ-GTDVTPLILNGEDLTLI 62
Query 81 SLTLNGKKISDSGNPNAMADGEEGYRLGSDGSLIISKAVLPKEAGESFTLQTQVDIHPKA 140
S++++G+ YR D +L+I + LP + FTL DIHP
Sbjct 63 SVSVDGQ-------------AWPHYR-QQDNTLVIEQ--LPAD----FTLTIVNDIHPAT 102
Query 141 NLKLRGLYASGSALVTQCEAEGFRRITYFLDRPDVLAKYTVRLEANKEKYPVLLSNGNK 199
N L GLY SG AL TQCEAEGFR ITY+LDRPDVLA++T R+ A+K +YP LLSNGN+
Sbjct 103 NSALEGLYLSGEALCTQCEAEGFRHITYYLDRPDVLARFTTRIVADKSRYPYLLSNGNR 161
Lambda K H
0.313 0.134 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 47162034073
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40