bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0046_orf3 Length=215 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd2_1910 122 9e-27 > 5807.cgd2_1910 Length=534 Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 69/181 (38%), Positives = 100/181 (55%), Gaps = 2/181 (1%) Query 13 RYVGQWTNGHLDGTGTLTHTDGATYVGTFKKDIKDGKGVETWTDGTVYEGDFKMGDKEGK 72 +Y G+W N G GT TH+DG+ YVG +K D K G+ +E+W DG+ +EG + G K+G Sbjct 84 KYEGEWQNDRAHGHGTYTHSDGSKYVGEWKNDKKHGRAIESWVDGSNFEGSYAYGLKQGF 143 Query 73 GKIKFPDGATYEGDFKQDLFDGEGVYKWPDGREYSGGWKEGLMEGFGVYTWPSGFTRKYQ 132 GK + DG+ Y G+F + +G G+Y W DGR Y+G W + M G+G + W R Y+ Sbjct 144 GKFSWHDGSKYIGNFDANQINGFGIYHWNDGRVYTGYWLKNHMFGYGKFDWTD--HRCYE 201 Query 133 GGFSKGIKTGKGILILIDGRKYDANFKNNKMHGHVTEIMPSGHSRQGLWQDGVFIRWLEA 192 G + K G G DGR Y +KN K HG + G W+DG +RW+++ Sbjct 202 GQYINDKKDGDGKFTWPDGRAYIGQWKNGKQHGIGIFYNIKKEGKVGEWRDGSRLRWIKS 261 Query 193 P 193 Sbjct 262 S 262 Lambda K H 0.316 0.139 0.450 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 56120981916 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40