bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0068_orf1
Length=280
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  3702.AT4G21940.1                                                     116    9e-25


> 3702.AT4G21940.1
Length=554

 Score =  116 bits (290),  Expect = 9e-25, Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 116/214 (54%), Gaps = 5/214 (2%)

Query  1    AKDFISSLLRRNPEDRLTAAAALEHPWLAVEDGSIQRHTIDIEVLKSMRRFAACTAIQRA  60
            AKD +  LL ++P+ R++AA ALEHPW  +  G      ID  VL  M++F A   +++ 
Sbjct  333  AKDLVRKLLTKDPKQRISAAQALEHPW--IRGGEAPDKPIDSAVLSRMKQFRAMNKLKKL  390

Query  61   ALGLIAMSMPSKDLDELEKLFCALDEKKTGSIRVESLVNVLVKTLN-IPEAEAHRIFHRI  119
            AL +IA S+  +++  L+ +F  +D  K+G+I  E L N L K  + + EAE  ++    
Sbjct  391  ALKVIAESLSEEEIKGLKTMFANMDTDKSGTITYEELKNGLAKLGSKLTEAEVKQLMEAA  450

Query  120  DLTGDQEINYSEFLAATFQTQVALSQSLIREAFERLDVDQSGEISLDNLRHILGDSYGGV  179
            D+ G+  I+Y EF++AT           + +AF+  D D SG I++D L   + +   G 
Sbjct  451  DVDGNGTIDYIEFISATMHRYRFDRDEHVFKAFQYFDKDNSGFITMDELESAMKEYGMGD  510

Query  180  LA--EEILQQCDIKKNGVIDFEEFMVALTGAVTF  211
             A  +E++ + D   +G I++EEF   +   +T 
Sbjct  511  EASIKEVIAEVDTDNDGRINYEEFCAMMRSGITL  544



Lambda     K      H
   0.317    0.130    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 92794370130


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40