bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0130_orf3
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
69293.ENSGACP00000003245 148 5e-34
> 69293.ENSGACP00000003245
Length=484
Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 181/394 (45%), Gaps = 82/394 (20%)
Query 121 EEFSRTTLPFLASVAKHISDLFPK-------GLKHMTRSHPSVHLRRIQVLCLMAASFFG 173
E + LP + +A S+L K G+ H S+ + + QV CL+A +FF
Sbjct 97 EHLFDSLLPDMVQLALRASELCTKPIPLLKGGMNH------SITMSQEQVACLLANAFFC 150
Query 174 IIPQKQRKLLRSWGRLRLNALDMHHRGFFEREPKLKALLIYFGSMQKTMSGCWQQMLKDN 233
P++ + +N + + KLK L+ YF S
Sbjct 151 TFPRRNSRRNEYCNYPDINFFRLFEGSSQMKIEKLKTLMCYFKS---------------- 194
Query 234 DFTQAKCTATCLCQEITFEGRTRKISPADEIISFYLHTPEATTFEAPEGEQVSRSEVDVS 293
FT+ K T +TF TRK + + P ++ +
Sbjct 195 -FTEQKPTGL-----VTF---TRK------------------SLDKP---------LNWT 218
Query 294 KIISQPLPLSGLTVDVHGDITKS-DGDLQVDFADMYVGGLSMWAGHVAQEELIFALRPEL 352
+ +Q L+ L + G I G LQVDFA+ +VGG +G V QEE+ F + PEL
Sbjct 219 RCSTQ---LTKLHITCEGTIEDDGHGMLQVDFANQFVGGGVTGSGLV-QEEIRFLINPEL 274
Query 353 HVIMLFREALRDDEAVVVKGAESFVLYSGYEGTFQVFPPVVPAGSHWSVHGLAPLDSMGR 412
+ LF EAL +E +++KG + + Y+GY T+Q GSH P D R
Sbjct 275 IISRLFTEALDPNECLIIKGTQQYSKYTGYSHTYQW------GGSH---RDTTPRDGWQR 325
Query 413 RETTVVAIDAIVVKNEREQYSIQSMKREILKAALGFQGDPFEDVIHETRAGVATGKWGCV 472
R T +VAIDA+ KN EQ++ + RE+ KA GF P E + A VATG WGC
Sbjct 326 RCTEIVAIDALQFKNFLEQFNPDKLNRELNKAYCGF-ARPEER--SQNLAAVATGNWGCG 382
Query 473 IFGGDNQLKSLLQWIAATAAGREMHYKAFGDATL 506
+FGGD +LK+LLQ +AA AGR++ Y FGD+ L
Sbjct 383 VFGGDARLKALLQMLAAAEAGRDVAYFTFGDSQL 416
Lambda K H
0.321 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 249870968851
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40