bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0155_orf3
Length=254
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFE0785c 302 8e-81
> 5833.PFE0785c
Length=456
Score = 302 bits (773), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 139/232 (59%), Positives = 186/232 (80%), Gaps = 0/232 (0%)
Query 21 SLRDLRMPAWHELQRYLTDPEILTSEILFLILTLSNIFVVYRLFLDVVPFPVFVTWWQLA 80
+P W +++RY DPE+LT+EILF+ LTL N+FV+YRLFLDV+P+P+FVTWWQLA
Sbjct 2 KFEKFNIPEWSDIERYFKDPELLTAEILFVALTLCNVFVMYRLFLDVIPYPIFVTWWQLA 61
Query 81 QGLLMAWCLGEVGKEYPKLAYFPRVEIDRRLLRRLFVPTIVNALMLVLANVLLYRVQCVA 140
QGLL+A+ GE+G+E+PK AYFP+VEI+ +L+ LFVP+I LMLVL+N LLY+ C+A
Sbjct 62 QGLLVAYVCGELGREFPKFAYFPKVEINENMLKVLFVPSIFYCLMLVLSNYLLYKTPCIA 121
Query 141 TLPVVVAFAVVLHHVTRFVGCGEEYMPMRWQAVGLLFTAFLLGITDSKTVGSDVLPWAIL 200
+ PV+V+F VV HH+TRF+GCGEEYMP+RW+++ L AF++G DSKT G V+ WA+L
Sbjct 122 SYPVLVSFTVVFHHLTRFIGCGEEYMPLRWKSIVFLLAAFIIGCFDSKTTGKGVIVWALL 181
Query 201 YAIFSAAFRAAFLQKVMHEVEGKGNLLHNHQHFISVIILPVLMLICGEGSVL 252
YA+FSA FRA F+QK+MH V+GKGN LHN+QH + V+ILPVL+L+ GE SV
Sbjct 182 YALFSAIFRAGFMQKIMHLVDGKGNTLHNNQHLLGVLILPVLILLSGELSVF 233
Lambda K H
0.331 0.143 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 78050691609
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40