bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0169_orf1
Length=247
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PF13_0322                                                       114    2e-24


> 5833.PF13_0322
Length=1193

 Score =  114 bits (285),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 137/254 (53%), Gaps = 17/254 (6%)

Query  4    RYPSSAEELKDWVTVSWVLNPGKKEEKEGKKEEKKD--------SSPPSSSSCTLLNGEE  55
            +Y   +EE ++ V+V+W+LNP   +          +        S+   SS  +L N  +
Sbjct  353  KYGDHSEEKENLVSVAWLLNPKVDKTNNHNNNHSNNQSSENNGYSNGSHSSDLSLENPTD  412

Query  56   RLLLQVLNFLLIGDKASPLYSSLSNYTQLGGPAYTPGLDLDLKYAMFTVGLKDVPQREGA  115
              +L ++N LLI    S LY +L++   LG      GL+  L   +F++GLK + +    
Sbjct  413  YFVLLIINNLLIHTPESVLYKALTD-CGLGNNVIDRGLNDSLVQYIFSIGLKGIKRNNEK  471

Query  116  AK-------EVEELVINTLKEIKEKGFSSLSLSAALNKIEFLLRETPRDRLPRGLIFARK  168
             K       EVE++++N LK++ ++GF+  ++ A++N IEF+L+E    +  + + F  +
Sbjct  472  IKNFDKVHYEVEDVIMNALKKVVKEGFNKSAVEASINNIEFILKEANL-KTSKSIDFVFE  530

Query  169  MTQEIVYNKDPLNALEFEETLWKIRERLAKGEKVFEQLIQKYFSDNPHRLTLRLIGNKEI  228
            MT ++ YN+DPL   EFE+ L  ++ ++       E+ ++K+F +N HR  + L G++  
Sbjct  531  MTSKLNYNRDPLLIFEFEKYLNIVKNKIKNEPMYLEKFVEKHFINNAHRSVILLEGDENY  590

Query  229  IKEREEEEKKSLKK  242
             +E+E  EK+ LKK
Sbjct  591  AQEQENLEKQELKK  604



Lambda     K      H
   0.311    0.132    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 73815382762


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40