bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0170_orf1
Length=110
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT1G27350.1 75.9 3e-13
> 3702.AT1G27350.1
Length=68
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 0/66 (0%)
Query 42 MAGLNRKYSKKIEAFDRNITKRGQVSESKQKRGKGYPVGPIVLGLFLFVVVGSAIIQIIS 101
M R +KIE FD+NI KRG V E+ K+GK YPVGPI+LG F+FVV+GS++ QII
Sbjct 1 MTTSKRLADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60
Query 102 SAQRGA 107
+A G
Sbjct 61 TATSGG 66
Lambda K H
0.326 0.143 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23096258976
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40