bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0196_orf1
Length=134
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0065 78.6 6e-14
> 5833.PF14_0065
Length=284
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query 41 MWFTTRQEGLDDPRPAMRGPCLDLPTTVFCGGVGGNSFLLRGGFLLQLFSLTGLFISYWA 100
MWFTTRQ+GLDD RGPC + G G + LR GF L+ +LT LF+SYW+
Sbjct 1 MWFTTRQDGLDDNCHTNRGPCFQI------SGFFGTT--LRIGFFLEFIALTFLFMSYWS 52
Query 101 SGGAGLFGYELQGMNEAARSSEGLHTALAFFSG 133
+GG GLF Y+L+ +N+ R + ++ ++G
Sbjct 53 NGGKGLFSYDLKNINDEYRLDQTFRNSITLWTG 85
Lambda K H
0.331 0.147 0.482
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22682284714
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40