bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0230_orf1
Length=131
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd2_130 90.5 1e-17
> 5807.cgd2_130
Length=112
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 82/114 (71%), Gaps = 2/114 (1%)
Query 18 MAMKYVAAYLMNVLGGKDAPTAKDVAQTIEAVGGDVDEQVLNALITAMEGKTAHEMIAAG 77
M MKYVAAYL+ V GK+ PTA D+ + +E+VG + D+ +++ LI+ M GK +HE+IA+G
Sbjct 1 MGMKYVAAYLLCVSSGKEQPTASDIKKVLESVGIEYDQSIIDVLISNMSGKLSHEVIASG 60
Query 78 MEKLQKIPTGGAVAAAPAAGGAAPAAGGSAPAKEEKKEEPEEEEDGDMGLSLFD 131
+ KLQ +PTGG + AA + AA SAPA+++K+EE EEE GD+G SLFD
Sbjct 61 LSKLQSVPTGGVAVSGGAAAASGGAAQDSAPAEKKKEEEEEEE--GDLGFSLFD 112
Lambda K H
0.309 0.127 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22935578866
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40