bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0263_orf1 Length=181 Score E Sequences producing significant alignments: (Bits) Value 5207.CNG03310 93.6 2e-18 > 5207.CNG03310 Length=323 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/176 (38%), Positives = 100/176 (56%), Gaps = 23/176 (13%) Query 2 RGWLAGIVPALVLVLNPAIQFTLYDHLRAKLMQLKQRWRTASREPSSNSLSSQHSSTGSL 61 +G GI PALVLV+NP IQ+T ++ L A L+ R+R S H +T + Sbjct 167 KGLWRGIGPALVLVVNPVIQYTTFERLVAALL----RYRFLS-----------HGAT-PV 210 Query 62 VSDRMLRIRVTPAESFLMGLAAKLAAALVTYPYLVVKTRAQSKVYNVKDYSSSVRSLIMI 121 + R ++ + F++G A+KL A TYPY+VVK+R Q+ + Y SS+R+++ I Sbjct 211 GKTALGRSSLSDWDFFILGAASKLVATSCTYPYIVVKSRLQAATHQ---YKSSLRAILHI 267 Query 122 LETEGLSGLFAGLPSKLTATLLSSAIMFTVYEQLLPLVVLLFRSLRVPTYRKRDVI 177 L EG+SGL+AGL KL ++L++A MF ++ LV L SL V RKR + Sbjct 268 LRAEGVSGLYAGLTLKLLQSVLTAAFMFVAQRRIYELVKYLL-SLSV---RKRKAV 319 Lambda K H 0.322 0.133 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 37665090561 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40